Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0286351-03
CDS Infomation	cds chromosome:IRGSP-1.0:6:10344190:10352513:-1 gene:Os06g0286351 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0286351-01);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-02);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-03);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-04)
Sequence	ATGAAAGCTCTCGAGCAAATTTTTCTGCAAAAACAGAGGCTACAACAAGAAATGCTGAAG TACATGTCCCTTCGACAGACAAGCCAGGAAGATACCCCTGATATGAAAAAAAAGATCCTG GGGTGTTTCCGGAGCATGTCTCGTTTGTTCAATGATCATACAAAGTCTGAGGAGTACTTG AACATGCTTCATCAGATAAAAGATGCCAACATCTGGAATATATTCACAAGCTTGCTTGAT TGTTCAACAACATTCAACGAAGCTTGGTCTCTTCGGGTTGATTTGCTAACGAAACTTGGT GAAAAACATGCATTACATGATTTTGTGAGCACGTTGTCGATGAGATGCTCATATTTACTT GTGAACAAGGAATATGTCAAAGAGATCCTTTCTGAAGCTTCTGACCAAAAATCTACTGGG AATACAAAACTTATGTCATCATGCATGGATCTTTTAACGGCAGTATCTAGTTTCTTCCCT TCACTTTTGTCTGGACTTGAAGAAGATATCATTGAGCTCCTGAAGGAGGATAATGAACTA CTTAAAGAGGGTATTGCTCATGTTCTGTCGAAGGCTGGTGGCAACATTCGTGAACAACTA GCTTCATCAAGTTCCATTACTCTTCTACTAGAGCGGCTATGTTTGGAAGGAACACGGAAG CAGGCAAAATACTCTGTTCATGCTTTGGCTGCTATAACAAAAGATGATGGCCTGATGTCT CTATCTGTTCTTTACAAGAGGCTTGTGGACTTGTTGGAGGAAAAGAAAGTGCATTTGCCA TCCATCTTACAATCCTTGGGGTGTATAGCTCAGATAGCAATGCCAATTTTTGAAACAAGG GGAGAAGAGATAATAAATTTTATAACTAAAAAAATTCTTGACTGCAATGATGATTCGGGC GACGTTTCTGCTCATAAATCTGAATGGAGTGATAGTACTCAAAGTTGTTTATTGAAGATT TATGGCATTAAAACTTTGGTGAAGAGCTGTCAACCTTGCAAAGATGCTCAAGCACATCCG GGAATTGAAAAATTAATGGGCATCCTTAAGAATATCCTTACATATGGTGATATTTCTGCA AATATGATTTCAAGCACTATTGATAAGGCCCATTTGAGGCTGGCGGCAGCAAAAGCTGTT CTCCGCTTATCAAGACAATGGGACCACAAAGTGCCTGTTGATGTATTCTATTTGACTCTC AGGATTTCACAGGATGATGTTCCTCAGGTGAGGAAATTATTTCTTAGTAAAGTACATCAA TATATTAAGGAAAGGGCCTTGGATGCAAAATATGCTTGTGCTTTCTTGTTAGCTATGGAT GATTATCATGCCCCACAGTATGAAGAGTTTAAGCACAACATAATTGAGGTTGCGCAGATA TGCCAGCAAGTTAAGATGCGCCAACTTTCTGTCCAAGCGGAAACAAATGTGCTCACTGCT TATCCAGAATATATGATTTCCTATTTGGTTCATGCCCTCTCTCATGATCCATCATGTCCT AACATTGAAGAGCATGAGGATGTTGAAGCATTTGGTCCAATTTACTGGCGATTGCATCTG CTTCTTTTGATCCTCCTGGGGGAAGAGGGTTTGCAGCACAGTGTACCAGGCATGAAAAAG GAGAGCTTCACAACAATAGTATCTATATTTAAAAGTATCAAATATTCCCAAGATGTGGTT GATGTTAACAAGACCAAGACACTGCATGCTATTTGTGATCTTGGTATCCTTATTGGAAAG AAATTATGTCAAGAGCAGATAAATATATCAGAAGCTCAAACAGTTTCACTGCCCAGTCAA CTTTATGCGCCAGTTCAGAAGGATCAGAATGAAAATTCTGTGGAGAGTGATGAGCAGATA TGGCCGGGTTGCGAGAATGTGTTGGCCCATTTTGAGGCTCTTATGACAGCAAAGTCTGCT GAGGTTGAATCTCCCAAGGATAAGATGCTTATAGATGAGACTGATGAATTTGGTAATGAA GTTCCTCTAGGAAAAATTGTGAAAATTTTAAAATCTCAAGGAGCAAAAAAGGCTGGGAGA AAGCAGAAGACAAAATCTGGTTCAATAAACATGGAAAAAGATGATGATGTCTTGGGACTG GTTAGAGAAATAAACTTGGACAATCAAGAAAATTTGGGGGAATCAGAAAAGAGCAAACCA AAGAAAAAGCGGATGGATGCAAAAGAGAGTAATGACAAGCCTGTAGATTTTTCAACACCA AAACGCAAGAGATCAGTTTCTAAGAGTAGACCACATTCAACGAAAGGCAACAAATACAGT GATGAGCTTCTACTGCAGTCTGTTGACCCAGATGAAACTATCAACTCATTTGAAAATAAG GTTGAGGGGGCCAAAAAAAGAGATGACTCGGTTGATACTGAGTTGGTAACATCGCCTGCT AGTGTTAAAACCCCTGTATCCAAAGGGAAAAAGGGTGCTAAGAAGCCCCACGCTGAAATC TTGAGTAGTAGTCCAAAGAAGTCTGATGAGGCAGGCAGTAGTAAGCGAACTGTTGATTCG GGAAGTTTAAATGGGTCGATCAAAAGGCAGAAGCCAAAATTGGTTTCTGGTCTAGCAAAG TGCACAACACATGACACAGGCAGTGAGGACCTGATTGGAAAGAGAATAAAAGTTTGGTGG CCGTTGGATAAGAAATTTTATGAAGGTGTTGTGGAATCTTTTGATTCATCAAAAAGAAGA CACACGGTGCTATATGATGATGGAGATGTTGAAGTGCTTAACCTAGCTAAAGAAAAGTGG GAAATTGTTGCAAGTGATGACCCGCCTGTAAAGGCCCGAAAAAAGGATCATTCAGGGAGA AACCAAGGACGAGCTCAGGATAAAAGCATTACCAGCAGCAAGCAAACTCCGCCGCCTGAA CAAGAGAAGTCAAAAAAGAGGCCCTCACCCCCAAAGAGGAAAGGCAAACCAAAAGGACTG CCGAAAAACAAACGCAGAAAGATAGGGGGTAAAAGTTCTGTTGATGCTGCCGGTGATGCG AATATTGATTCGGATTCATCAAGTTCTCTCGCACACTCAGATTCTGATAATGATAAAAAA TCTGATGGACGCAATGAGAAAGAAGTAGTAGTAGCCAAGAAAGCAAAAGCTGAGAAAGTG TCTGGCAAAGGTGATGAGCCAAAAGAGGAGGAACCTGATGACCATAATTTAAACAGCAAG GAGGAATCTGACAACGAGACTCTTAGTGTCTGGAAAAAACGCACAGCTAAAGCAACATAG

Peptide Sequence

PEP ID	Os06t0286351-03
PEP Infomation	pep chromosome:IRGSP-1.0:6:10344190:10352513:-1 gene:Os06g0286351 transcript:Os06t0286351-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0286351-01);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-02);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-03);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-04)
Sequence	MKALEQIFLQKQRLQQEMLKYMSLRQTSQEDTPDMKKKILGCFRSMSRLFNDHTKSEEYL NMLHQIKDANIWNIFTSLLDCSTTFNEAWSLRVDLLTKLGEKHALHDFVSTLSMRCSYLL VNKEYVKEILSEASDQKSTGNTKLMSSCMDLLTAVSSFFPSLLSGLEEDIIELLKEDNEL LKEGIAHVLSKAGGNIREQLASSSSITLLLERLCLEGTRKQAKYSVHALAAITKDDGLMS LSVLYKRLVDLLEEKKVHLPSILQSLGCIAQIAMPIFETRGEEIINFITKKILDCNDDSG DVSAHKSEWSDSTQSCLLKIYGIKTLVKSCQPCKDAQAHPGIEKLMGILKNILTYGDISA NMISSTIDKAHLRLAAAKAVLRLSRQWDHKVPVDVFYLTLRISQDDVPQVRKLFLSKVHQ YIKERALDAKYACAFLLAMDDYHAPQYEEFKHNIIEVAQICQQVKMRQLSVQAETNVLTA YPEYMISYLVHALSHDPSCPNIEEHEDVEAFGPIYWRLHLLLLILLGEEGLQHSVPGMKK ESFTTIVSIFKSIKYSQDVVDVNKTKTLHAICDLGILIGKKLCQEQINISEAQTVSLPSQ LYAPVQKDQNENSVESDEQIWPGCENVLAHFEALMTAKSAEVESPKDKMLIDETDEFGNE VPLGKIVKILKSQGAKKAGRKQKTKSGSINMEKDDDVLGLVREINLDNQENLGESEKSKP KKKRMDAKESNDKPVDFSTPKRKRSVSKSRPHSTKGNKYSDELLLQSVDPDETINSFENK VEGAKKRDDSVDTELVTSPASVKTPVSKGKKGAKKPHAEILSSSPKKSDEAGSSKRTVDS GSLNGSIKRQKPKLVSGLAKCTTHDTGSEDLIGKRIKVWWPLDKKFYEGVVESFDSSKRR HTVLYDDGDVEVLNLAKEKWEIVASDDPPVKARKKDHSGRNQGRAQDKSITSSKQTPPPE QEKSKKRPSPPKRKGKPKGLPKNKRRKIGGKSSVDAAGDANIDSDSSSSLAHSDSDNDKK SDGRNEKEVVVAKKAKAEKVSGKGDEPKEEEPDDHNLNSKEESDNETLSVWKKRTAKAT

Transcript Sequence

Transcript ID	Os06t0286351-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:10344190:10352513:-1 gene:Os06g0286351 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os06t0286351-01);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-02);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-03);Similar to AF-4 domain containing protein-like protein. (Os06t0286351-04)
Sequence	AGACCAGAGTCAATTGAATCAATTTTATGTGGTTCATTGTTCCCACCAGAGTATCCAACA AAGGAAAGAGTGAAACATTGGGTAACTGCTGTCACACATTTCGACAAAGTTGAGATGAAA GCTCTCGAGCAAATTTTTCTGCAAAAACAGAGGCTACAACAAGAAATGCTGAAGTACATG TCCCTTCGACAGACAAGCCAGGAAGATACCCCTGATATGAAAAAAAAGATCCTGGGGTGT TTCCGGAGCATGTCTCGTTTGTTCAATGATCATACAAAGTCTGAGGAGTACTTGAACATG CTTCATCAGATAAAAGATGCCAACATCTGGAATATATTCACAAGCTTGCTTGATTGTTCA ACAACATTCAACGAAGCTTGGTCTCTTCGGGTTGATTTGCTAACGAAACTTGGTGAAAAA CATGCATTACATGATTTTGTGAGCACGTTGTCGATGAGATGCTCATATTTACTTGTGAAC AAGGAATATGTCAAAGAGATCCTTTCTGAAGCTTCTGACCAAAAATCTACTGGGAATACA AAACTTATGTCATCATGCATGGATCTTTTAACGGCAGTATCTAGTTTCTTCCCTTCACTT TTGTCTGGACTTGAAGAAGATATCATTGAGCTCCTGAAGGAGGATAATGAACTACTTAAA GAGGGTATTGCTCATGTTCTGTCGAAGGCTGGTGGCAACATTCGTGAACAACTAGCTTCA TCAAGTTCCATTACTCTTCTACTAGAGCGGCTATGTTTGGAAGGAACACGGAAGCAGGCA AAATACTCTGTTCATGCTTTGGCTGCTATAACAAAAGATGATGGCCTGATGTCTCTATCT GTTCTTTACAAGAGGCTTGTGGACTTGTTGGAGGAAAAGAAAGTGCATTTGCCATCCATC TTACAATCCTTGGGGTGTATAGCTCAGATAGCAATGCCAATTTTTGAAACAAGGGGAGAA GAGATAATAAATTTTATAACTAAAAAAATTCTTGACTGCAATGATGATTCGGGCGACGTT TCTGCTCATAAATCTGAATGGAGTGATAGTACTCAAAGTTGTTTATTGAAGATTTATGGC ATTAAAACTTTGGTGAAGAGCTGTCAACCTTGCAAAGATGCTCAAGCACATCCGGGAATT GAAAAATTAATGGGCATCCTTAAGAATATCCTTACATATGGTGATATTTCTGCAAATATG ATTTCAAGCACTATTGATAAGGCCCATTTGAGGCTGGCGGCAGCAAAAGCTGTTCTCCGC TTATCAAGACAATGGGACCACAAAGTGCCTGTTGATGTATTCTATTTGACTCTCAGGATT TCACAGGATGATGTTCCTCAGGTGAGGAAATTATTTCTTAGTAAAGTACATCAATATATT AAGGAAAGGGCCTTGGATGCAAAATATGCTTGTGCTTTCTTGTTAGCTATGGATGATTAT CATGCCCCACAGTATGAAGAGTTTAAGCACAACATAATTGAGGTTGCGCAGATATGCCAG CAAGTTAAGATGCGCCAACTTTCTGTCCAAGCGGAAACAAATGTGCTCACTGCTTATCCA GAATATATGATTTCCTATTTGGTTCATGCCCTCTCTCATGATCCATCATGTCCTAACATT GAAGAGCATGAGGATGTTGAAGCATTTGGTCCAATTTACTGGCGATTGCATCTGCTTCTT TTGATCCTCCTGGGGGAAGAGGGTTTGCAGCACAGTGTACCAGGCATGAAAAAGGAGAGC TTCACAACAATAGTATCTATATTTAAAAGTATCAAATATTCCCAAGATGTGGTTGATGTT AACAAGACCAAGACACTGCATGCTATTTGTGATCTTGGTATCCTTATTGGAAAGAAATTA TGTCAAGAGCAGATAAATATATCAGAAGCTCAAACAGTTTCACTGCCCAGTCAACTTTAT GCGCCAGTTCAGAAGGATCAGAATGAAAATTCTGTGGAGAGTGATGAGCAGATATGGCCG GGTTGCGAGAATGTGTTGGCCCATTTTGAGGCTCTTATGACAGCAAAGTCTGCTGAGGTT GAATCTCCCAAGGATAAGATGCTTATAGATGAGACTGATGAATTTGGTAATGAAGTTCCT CTAGGAAAAATTGTGAAAATTTTAAAATCTCAAGGAGCAAAAAAGGCTGGGAGAAAGCAG AAGACAAAATCTGGTTCAATAAACATGGAAAAAGATGATGATGTCTTGGGACTGGTTAGA GAAATAAACTTGGACAATCAAGAAAATTTGGGGGAATCAGAAAAGAGCAAACCAAAGAAA AAGCGGATGGATGCAAAAGAGAGTAATGACAAGCCTGTAGATTTTTCAACACCAAAACGC AAGAGATCAGTTTCTAAGAGTAGACCACATTCAACGAAAGGCAACAAATACAGTGATGAG CTTCTACTGCAGTCTGTTGACCCAGATGAAACTATCAACTCATTTGAAAATAAGGTTGAG GGGGCCAAAAAAAGAGATGACTCGGTTGATACTGAGTTGGTAACATCGCCTGCTAGTGTT AAAACCCCTGTATCCAAAGGGAAAAAGGGTGCTAAGAAGCCCCACGCTGAAATCTTGAGT AGTAGTCCAAAGAAGTCTGATGAGGCAGGCAGTAGTAAGCGAACTGTTGATTCGGGAAGT TTAAATGGGTCGATCAAAAGGCAGAAGCCAAAATTGGTTTCTGGTCTAGCAAAGTGCACA ACACATGACACAGGCAGTGAGGACCTGATTGGAAAGAGAATAAAAGTTTGGTGGCCGTTG GATAAGAAATTTTATGAAGGTGTTGTGGAATCTTTTGATTCATCAAAAAGAAGACACACG GTGCTATATGATGATGGAGATGTTGAAGTGCTTAACCTAGCTAAAGAAAAGTGGGAAATT GTTGCAAGTGATGACCCGCCTGTAAAGGCCCGAAAAAAGGATCATTCAGGGAGAAACCAA GGACGAGCTCAGGATAAAAGCATTACCAGCAGCAAGCAAACTCCGCCGCCTGAACAAGAG AAGTCAAAAAAGAGGCCCTCACCCCCAAAGAGGAAAGGCAAACCAAAAGGACTGCCGAAA AACAAACGCAGAAAGATAGGGGGTAAAAGTTCTGTTGATGCTGCCGGTGATGCGAATATT GATTCGGATTCATCAAGTTCTCTCGCACACTCAGATTCTGATAATGATAAAAAATCTGAT GGACGCAATGAGAAAGAAGTAGTAGTAGCCAAGAAAGCAAAAGCTGAGAAAGTGTCTGGC AAAGGTGATGAGCCAAAAGAGGAGGAACCTGATGACCATAATTTAAACAGCAAGGAGGAA TCTGACAACGAGACTCTTAGTGTCTGGAAAAAACGCACAGCTAAAGCAACATAGGCTTTG CTTTCTCGGTTGATTATTCTTCGTAGGATGCAGATTTCACGGGCAGCGGATGGGGATGTG GATATCTCATTTAATTGACCTTGGAATTGACAGTTGTGATGTAGAAAATGTTCTTTGCAA TAGCAACAGGTTTAGTATAGAAGAGCAGTGGAATAGGATTTGCTTCTAATGTTACTAGAT GCTAGAACTTGTTTCCAACTTAATTAGCTATGGCATTGTGCCCTGGAATTTCATTGTATA CGTATCCTTGAGAGGGCCACAGGTCATGTAACATATCCGTTTAGCATTATTTTGCAGGAA TAGTGATTATGTGTTAAAACTCATGTAGAAATGTTGTAAACAATAAACAATGGTTCTTGG ATTGTACTGTACAACTAGAATGGGCATCCCAATTTTGGGGTGCCTTATTCTGAAGCAGCA GATTTTGCATGTAGAATGTGACATGTGAGTTGATACTTCAGATGCTGTATCACAGCATAT GCTTGTGTTGAACATT