Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0284800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:10120998:10124400:1 gene:Os06g0284800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os06t0284800-01)
Sequence

ATGCTCGACCGATCCCTCAGGCCGCCGCAGCCGCAGCAGGCGGCGGCGGAGGCGGAGGCG
GGCCCCGGCGGTGGCGAGGGAGGGGGGAACGTGGATCGGGTGCTGTTCAAGAACCTCGTC
GAGATGGTGCCGCTCGTGGAGTCGCTCATGGACCGGAGGTCGAACCCGTCCTACTCGAGG
CGCGCGTCGATGGTGTACACGCCGGCGCCGGCGAAGAAGGGTTCTGATTTGAAGAGTGTG
AAGTCGCCGCAAAGTGTGTCGGTGAAAAAACGGAGGGATCCTGGAGAGACGGGCAAGAAG
AGCACCGCCGACTCCAATGGTGAGAATGGCGCGGTTGCGCCAGTCGGTCTGTTGGGGGGA
GAAAATAAACCCAAGGATAAGGATGAGATCGTTTTGCTGCGTGAGCAGATCGAAGAGTTG
CAAAAGACGCTGCTTGAGAAAGAGGAAGCACTGAAATCCGCGGAGAGTTTGGTGGGTGAG
ATGAATACATTATATTCGACAGTAGATGAGCTGAGACGCCAGGTTGCTGACAAGGAAGGT
TTGATCAAATCTATCAATTCTCAGCTGCACAATGCGAAGATTATGCTTGCAGACAAGCAA
GCATCATTAGAGAAATTAGAATGGGAGGTGAAGACGTCAAATAAGAAAGTAGAAGATCTT
CAAGGGGATGTCTCCAATATGGAGTTTGAGATAGGTTCGTTGATGGCATTATTCGAAAAA
ATTTCGGAGAATGTTTCAGGTGAACTCCAAGATGGTAGCTTGCCATCATCTTTTGAATTG
GAAGCACTTCAATCAACTAGCGAAATCGACAAGATTGAGGTTGAGAAGATAGAGCAAGAA
GCGGTTACATATGCCGAAGCTCTTGCTGCAGCAAGAGAGAACCCAAACGAGGAGCAGCTG
AATATAGCTGCGGAAGCACGGTTAAGGCTGCAGGTCCTTGTGCTATGA

Peptide Sequence

PEP ID

Os06t0284800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:10120998:10124400:1 gene:Os06g0284800 transcript:Os06t0284800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os06t0284800-01)
Sequence

MLDRSLRPPQPQQAAAEAEAGPGGGEGGGNVDRVLFKNLVEMVPLVESLMDRRSNPSYSR
RASMVYTPAPAKKGSDLKSVKSPQSVSVKKRRDPGETGKKSTADSNGENGAVAPVGLLGG
ENKPKDKDEIVLLREQIEELQKTLLEKEEALKSAESLVGEMNTLYSTVDELRRQVADKEG
LIKSINSQLHNAKIMLADKQASLEKLEWEVKTSNKKVEDLQGDVSNMEFEIGSLMALFEK
ISENVSGELQDGSLPSSFELEALQSTSEIDKIEVEKIEQEAVTYAEALAAARENPNEEQL
NIAAEARLRLQVLVL

Transcript Sequence

Transcript ID

Os06t0284800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:10120998:10124400:1 gene:Os06g0284800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os06t0284800-01)
Sequence

GGTCTGGGATTTTGAAACGGGGAGGCGGAATGCTCGACCGATCCCTCAGGCCGCCGCAGC
CGCAGCAGGCGGCGGCGGAGGCGGAGGCGGGCCCCGGCGGTGGCGAGGGAGGGGGGAACG
TGGATCGGGTGCTGTTCAAGAACCTCGTCGAGATGGTGCCGCTCGTGGAGTCGCTCATGG
ACCGGAGGTCGAACCCGTCCTACTCGAGGCGCGCGTCGATGGTGTACACGCCGGCGCCGG
CGAAGAAGGGTTCTGATTTGAAGAGTGTGAAGTCGCCGCAAAGTGTGTCGGTGAAAAAAC
GGAGGGATCCTGGAGAGACGGGCAAGAAGAGCACCGCCGACTCCAATGGTGAGAATGGCG
CGGTTGCGCCAGTCGGTCTGTTGGGGGGAGAAAATAAACCCAAGGATAAGGATGAGATCG
TTTTGCTGCGTGAGCAGATCGAAGAGTTGCAAAAGACGCTGCTTGAGAAAGAGGAAGCAC
TGAAATCCGCGGAGAGTTTGGTGGGTGAGATGAATACATTATATTCGACAGTAGATGAGC
TGAGACGCCAGGTTGCTGACAAGGAAGGTTTGATCAAATCTATCAATTCTCAGCTGCACA
ATGCGAAGATTATGCTTGCAGACAAGCAAGCATCATTAGAGAAATTAGAATGGGAGGTGA
AGACGTCAAATAAGAAAGTAGAAGATCTTCAAGGGGATGTCTCCAATATGGAGTTTGAGA
TAGGTTCGTTGATGGCATTATTCGAAAAAATTTCGGAGAATGTTTCAGGTGAACTCCAAG
ATGGTAGCTTGCCATCATCTTTTGAATTGGAAGCACTTCAATCAACTAGCGAAATCGACA
AGATTGAGGTTGAGAAGATAGAGCAAGAAGCGGTTACATATGCCGAAGCTCTTGCTGCAG
CAAGAGAGAACCCAAACGAGGAGCAGCTGAATATAGCTGCGGAAGCACGGTTAAGGCTGC
AGGTCCTTGTGCTATGATGCGCCAAGTGCATATTGTAGTGTATGTGTATGATAATGTCGA
ATCGCTGATGTAATTATGTGTGCGTGCTTGATCGAGTTTATTTCATGTGAGACCGTACTG
ACGGTAATCGATCAAGCACCAGATACTGGACACTTATTTAATTGGAGATGATGTTTATTC