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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0284500-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:10101308:10102349:1 gene:Os06g0284500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 20 description:Zinc finger, Dof-type family protein. (Os06t0284500-00)
Sequence

ATGCAGGAGTTCCACCCCGTCCCCGGGCTGGCCGGCCGGCTGTTCGGCGGCGCGGCGGCG
GCGGCGGCTGTGGCGGCGGTGGAGGAGGTGCGGTGCCCGCGGTGCGACTCGTCGAACACC
AAGTTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTCTGCAAGGCGTGC
CGCCGCTACTGGACCAAGGGCGGCCTCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGC
AAGCCCAAGCGCCCGGCGCCGCCGCCGTCGTCCTCCTTCACCGGCGGCGGCGGCGGCGGC
GGCGGGTGTGGCCATCGCGACTCCAAGAGCGCACGCTCAGCCGGCGGCGGCGGCGACGGC
TCGGGCTCGACCGCGAGCGCCACGGCGACCCCCGCTGCGGCGCCTGCGTCGTCGAACACC
TTGTCTGCTGCTGTTTCCCAGCCAAGCAGCGTCGACGCGCTGTCGCCGCCTCCGGCGCCG
ATGTTCGCCGACCAGGCCACGGCGTTCGCGTCGCTCTTCGCGCCGCCGCCGCCGCCACCG
TCGCAGGCGCTCCCGGCCTTCGCGAGCTTCACGGCGCAGCCCAAGGCAGAGGAGGACGTC
GCCGACGCACCTGCGCTCGCAGCCACGGAGCAGCACCGGTCGTCCTCGGCGGCGTCGTTC
GCCGCACACAGCATCTCGCCGCCGTTCGCCGCCGCACGGTCCTCGGATGGGCCGGCAGCG
GCTGCCGCCGCCGCCGCCGCCGACTGGGCGCCTCCGACGGCGGTGCTCGACGCCGGGATG
TTCGACCTCGCCGGCGCCATCGGCGGCGACACGTCGTACTGGAACGCGGCGAGCTGGACT
GACCACGACGGCACGATCTACCTGCCGTAG

Peptide Sequence

PEP ID

Os06t0284500-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:10101308:10102349:1 gene:Os06g0284500 transcript:Os06t0284500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 20 description:Zinc finger, Dof-type family protein. (Os06t0284500-00)
Sequence

MQEFHPVPGLAGRLFGGAAAAAAVAAVEEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKAC
RRYWTKGGLLRNVPVGGGCRKPKRPAPPPSSSFTGGGGGGGGCGHRDSKSARSAGGGGDG
SGSTASATATPAAAPASSNTLSAAVSQPSSVDALSPPPAPMFADQATAFASLFAPPPPPP
SQALPAFASFTAQPKAEEDVADAPALAATEQHRSSSAASFAAHSISPPFAAARSSDGPAA
AAAAAAADWAPPTAVLDAGMFDLAGAIGGDTSYWNAASWTDHDGTIYLP

Transcript Sequence

Transcript ID

Os06t0284500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:10101308:10102349:1 gene:Os06g0284500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 20 description:Zinc finger, Dof-type family protein. (Os06t0284500-00)
Sequence

GCCGAGCAGAGCAGATAGATAGCGCAGCGCAGCCCAGCAAGCAGCCTCGCTAGCTCTCGC
AAACCTTCGCCACCAAGAACCCGGAAACCCCCTCTTCCAGAAGCTTCTGGAATCAATCTC
CGGTCGAGCAACATGCAGGAGTTCCACCCCGTCCCCGGGCTGGCCGGCCGGCTGTTCGGC
GGCGCGGCGGCGGCGGCGGCTGTGGCGGCGGTGGAGGAGGTGCGGTGCCCGCGGTGCGAC
TCGTCGAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTC
TGCAAGGCGTGCCGCCGCTACTGGACCAAGGGCGGCCTCCTCCGCAACGTCCCCGTCGGC
GGCGGCTGCCGCAAGCCCAAGCGCCCGGCGCCGCCGCCGTCGTCCTCCTTCACCGGCGGC
GGCGGCGGCGGCGGCGGGTGTGGCCATCGCGACTCCAAGAGCGCACGCTCAGCCGGCGGC
GGCGGCGACGGCTCGGGCTCGACCGCGAGCGCCACGGCGACCCCCGCTGCGGCGCCTGCG
TCGTCGAACACCTTGTCTGCTGCTGTTTCCCAGCCAAGCAGCGTCGACGCGCTGTCGCCG
CCTCCGGCGCCGATGTTCGCCGACCAGGCCACGGCGTTCGCGTCGCTCTTCGCGCCGCCG
CCGCCGCCACCGTCGCAGGCGCTCCCGGCCTTCGCGAGCTTCACGGCGCAGCCCAAGGCA
GAGGAGGACGTCGCCGACGCACCTGCGCTCGCAGCCACGGAGCAGCACCGGTCGTCCTCG
GCGGCGTCGTTCGCCGCACACAGCATCTCGCCGCCGTTCGCCGCCGCACGGTCCTCGGAT
GGGCCGGCAGCGGCTGCCGCCGCCGCCGCCGCCGACTGGGCGCCTCCGACGGCGGTGCTC
GACGCCGGGATGTTCGACCTCGCCGGCGCCATCGGCGGCGACACGTCGTACTGGAACGCG
GCGAGCTGGACTGACCACGACGGCACGATCTACCTGCCGTAGTACTGTGTCCGTCTGCTT
TGACGATCGTGCGCGCCGCCGC