Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0283200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:10003546:10006951:1 gene:Os06g0283200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0283200-01)
Sequence	ATGGCCTCGCCGCCCGCCGGCGACGCCCCGCCGCCGGCGGCGGCGGCACGGGAGGAGGAG GAGGAGGAGGGCGTGAGCTGCGGCATCTGCCTGACGGACGCGCGGCGGGCGGTGCGCGGG GAGCTCGACTGCTGCGCCCACCACTTCTGCTTCGTCTGCATCATGGCGTGGGCGCGCGTC GAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTTCCGCACCATCACCCGCCCGCCCGTCCCC GGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGTCCCCGAGCGCAACCAGGCTTGCAACCCT TCGGGCAATGGCAGCAGCACTGTAGACGCTGATCTCTATGCAAACACCAGCTGTAGCGTA TGTAACCTCTCCAATGATGATGAACTGCTGATGTTGTGCGAGCTCTGCGATTCTGCTGTG CACACTTACTGTGCCGGTCTAGGCACTGAAATTCCTGAGGGTGACTGGTTCTGTACGGAC TGCATGACAGCCAAGGAGGAGCATTCGAGGTGTGAGATTGACGATGACAATTCTAGTGAT CATGGTGAATTTAAAATCACCATTGAAGTTCCAATAGCTGATCCAGTTGCTGCTCCTTCC ATTTCGGATATTGTGGATGAGGGTCACTCTCCAAATTTAGTACAAAGGTCAAGTGTGCAG AGCAACAGGCCTTCCATTTCTGATCCAGTTCCTTCCATTTATGATATTGTGGATGACGAT TACACCACAATTCCAATAGGCAGGGTCAATGCAAGGAGCACTAGGCTGGACAGTAGGGCT GAGCGTTTGCCATCACAGGGTATTTCCGTTGGACCACAATGCCCTGAATCTCCTCAGGAG CGAGAAAATAGTCGGGTGTGTTCGCATGCCCGTTCTCGCATTGAGTCTGAGAGAGCTAGA ACACTGCGTAACTCTCGCAATCTTGGTAGCCGTATAAGGGAACTGCGTGAGAACTGGTCT GCTCTCCGTTCAGGTTCGATTGGGTTTGCAACACAATTACACAATAGGAGAAGGGGAAAT GGTGCTGGTACTTGTGATATTGAAGAACGCCATCGGTCCACAACAACCTTCATGGAGGTG GCTGCTTCCTCATCTGGTCATGCTAAAAAAATTTCACCTAAGAATAGTTCTGATGTGCAC AAGGCATGGAAAATGCTAGAAATGGCAAAATCATCTGGTGGGAAGAAGAAACCTGACAAC CCTTCCTCCCTCAATTGCAGTGTTCCATTCTCCATGGGGAATAGATCGACTTCATACAGC CCAATTGATGCAATTTTAGGACATAAGAATAACAAGCTGTATGATGGAATAACTCAGAAA AACAACGCGGAACAACACCGTAGTACAAACATGGAAAATAAACCTCCAACAATGAATTTT GGAGAATGCCGTAAACTGCAGGAGAAATTCCATGGGTCAGCTCATGGAAGAACACCTTCT ACAATTATGAGGCAGGAAAGTTTGACTGGTAAAGTTTCCTCATCAAGCAATAATGAGAAG CATAATCGTAGTATAAACATGGAAAATAGGCCTCCAACAGTGAATTTTGGAGAACACCGT AAACTGCAAGAGAGTGCATCAGTTCATGGAAGAATACCTTCTACAGTTATGATGCAGGAA AATTTGAATGGTAAAGTTGCCTCATCAAGCAATAATGAGGATGCAGGTCAAATATTTGAA TCTTCACGTGACGTAAGCAGACCAGAGAAATCCAAACCAGTTGTATCCTGTCCGCTTACG TTCAGTTTACTATCTGGCCAGTCCATGGTGACCTCATCACAACAATTAAGACCTGGATGG AGCCAATCTACCGAAATGGTAAGCTCTCAGGAACCATCAGCCACTGCGGCATCTATTGAC ATCGGTACAGCTGGAGCAAACGACAAAGTTAAAGGTTCTAGACCAGATCGTCTTGAGCGC AAGAGAAAACTTGGTTCTGAAACACATGATGACAAGGGATCCAAGAGATCTATGTCAAGT TGTAAAATAAGAAAAAGTGATATTTCATTTTTGGCCATACGTGAGTTGAAGCTGCTCAAT ATAGACAAAACTTATGGTTCTGACACCTTCAAGGAAGTTGCTCGAGCAGCAACGCATACT GTTTTGGCCTCCTGTGGATTGGAACATTCACCATCGGTAGCTCTTGCACTCCCAAGACCG GTTTGCAAGCACACCTGCAAAACTGAACCTCTCCCATCTCCAGATGTACTGACCGATTTT TGCAGAGAATGCTTGTGTAATTTTGTAAAAGAAGTCATCAGCTCATTGTTGTCTGGCAGG AAGATGGAGTGA

Peptide Sequence

PEP ID	Os06t0283200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:10003546:10006951:1 gene:Os06g0283200 transcript:Os06t0283200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0283200-01)
Sequence	MASPPAGDAPPPAAAAREEEEEEGVSCGICLTDARRAVRGELDCCAHHFCFVCIMAWARV ESRCPFCKARFRTITRPPVPGRFPSQRVVAVPERNQACNPSGNGSSTVDADLYANTSCSV CNLSNDDELLMLCELCDSAVHTYCAGLGTEIPEGDWFCTDCMTAKEEHSRCEIDDDNSSD HGEFKITIEVPIADPVAAPSISDIVDEGHSPNLVQRSSVQSNRPSISDPVPSIYDIVDDD YTTIPIGRVNARSTRLDSRAERLPSQGISVGPQCPESPQERENSRVCSHARSRIESERAR TLRNSRNLGSRIRELRENWSALRSGSIGFATQLHNRRRGNGAGTCDIEERHRSTTTFMEV AASSSGHAKKISPKNSSDVHKAWKMLEMAKSSGGKKKPDNPSSLNCSVPFSMGNRSTSYS PIDAILGHKNNKLYDGITQKNNAEQHRSTNMENKPPTMNFGECRKLQEKFHGSAHGRTPS TIMRQESLTGKVSSSSNNEKHNRSINMENRPPTVNFGEHRKLQESASVHGRIPSTVMMQE NLNGKVASSSNNEDAGQIFESSRDVSRPEKSKPVVSCPLTFSLLSGQSMVTSSQQLRPGW SQSTEMVSSQEPSATAASIDIGTAGANDKVKGSRPDRLERKRKLGSETHDDKGSKRSMSS CKIRKSDISFLAIRELKLLNIDKTYGSDTFKEVARAATHTVLASCGLEHSPSVALALPRP VCKHTCKTEPLPSPDVLTDFCRECLCNFVKEVISSLLSGRKME

Transcript Sequence

Transcript ID	Os06t0283200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:10003546:10006951:1 gene:Os06g0283200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0283200-01)
Sequence	GCGGAGCAGCGGCCGCGACGCGCCCCCCATGGCCTCGCCGCCCGCCGGCGACGCCCCGCC GCCGGCGGCGGCGGCACGGGAGGAGGAGGAGGAGGAGGGCGTGAGCTGCGGCATCTGCCT GACGGACGCGCGGCGGGCGGTGCGCGGGGAGCTCGACTGCTGCGCCCACCACTTCTGCTT CGTCTGCATCATGGCGTGGGCGCGCGTCGAGTCGCGCTGCCCCTTCTGCAAGGCCCGCTT CCGCACCATCACCCGCCCGCCCGTCCCCGGCCGCTTCCCTTCCCAGCGCGTCGTCGCCGT CCCCGAGCGCAACCAGGCTTGCAACCCTTCGGGCAATGGCAGCAGCACTGTAGACGCTGA TCTCTATGCAAACACCAGCTGTAGCGTATGTAACCTCTCCAATGATGATGAACTGCTGAT GTTGTGCGAGCTCTGCGATTCTGCTGTGCACACTTACTGTGCCGGTCTAGGCACTGAAAT TCCTGAGGGTGACTGGTTCTGTACGGACTGCATGACAGCCAAGGAGGAGCATTCGAGGTG TGAGATTGACGATGACAATTCTAGTGATCATGGTGAATTTAAAATCACCATTGAAGTTCC AATAGCTGATCCAGTTGCTGCTCCTTCCATTTCGGATATTGTGGATGAGGGTCACTCTCC AAATTTAGTACAAAGGTCAAGTGTGCAGAGCAACAGGCCTTCCATTTCTGATCCAGTTCC TTCCATTTATGATATTGTGGATGACGATTACACCACAATTCCAATAGGCAGGGTCAATGC AAGGAGCACTAGGCTGGACAGTAGGGCTGAGCGTTTGCCATCACAGGGTATTTCCGTTGG ACCACAATGCCCTGAATCTCCTCAGGAGCGAGAAAATAGTCGGGTGTGTTCGCATGCCCG TTCTCGCATTGAGTCTGAGAGAGCTAGAACACTGCGTAACTCTCGCAATCTTGGTAGCCG TATAAGGGAACTGCGTGAGAACTGGTCTGCTCTCCGTTCAGGTTCGATTGGGTTTGCAAC ACAATTACACAATAGGAGAAGGGGAAATGGTGCTGGTACTTGTGATATTGAAGAACGCCA TCGGTCCACAACAACCTTCATGGAGGTGGCTGCTTCCTCATCTGGTCATGCTAAAAAAAT TTCACCTAAGAATAGTTCTGATGTGCACAAGGCATGGAAAATGCTAGAAATGGCAAAATC ATCTGGTGGGAAGAAGAAACCTGACAACCCTTCCTCCCTCAATTGCAGTGTTCCATTCTC CATGGGGAATAGATCGACTTCATACAGCCCAATTGATGCAATTTTAGGACATAAGAATAA CAAGCTGTATGATGGAATAACTCAGAAAAACAACGCGGAACAACACCGTAGTACAAACAT GGAAAATAAACCTCCAACAATGAATTTTGGAGAATGCCGTAAACTGCAGGAGAAATTCCA TGGGTCAGCTCATGGAAGAACACCTTCTACAATTATGAGGCAGGAAAGTTTGACTGGTAA AGTTTCCTCATCAAGCAATAATGAGAAGCATAATCGTAGTATAAACATGGAAAATAGGCC TCCAACAGTGAATTTTGGAGAACACCGTAAACTGCAAGAGAGTGCATCAGTTCATGGAAG AATACCTTCTACAGTTATGATGCAGGAAAATTTGAATGGTAAAGTTGCCTCATCAAGCAA TAATGAGGATGCAGGTCAAATATTTGAATCTTCACGTGACGTAAGCAGACCAGAGAAATC CAAACCAGTTGTATCCTGTCCGCTTACGTTCAGTTTACTATCTGGCCAGTCCATGGTGAC CTCATCACAACAATTAAGACCTGGATGGAGCCAATCTACCGAAATGGTAAGCTCTCAGGA ACCATCAGCCACTGCGGCATCTATTGACATCGGTACAGCTGGAGCAAACGACAAAGTTAA AGGTTCTAGACCAGATCGTCTTGAGCGCAAGAGAAAACTTGGTTCTGAAACACATGATGA CAAGGGATCCAAGAGATCTATGTCAAGTTGTAAAATAAGAAAAAGTGATATTTCATTTTT GGCCATACGTGAGTTGAAGCTGCTCAATATAGACAAAACTTATGGTTCTGACACCTTCAA GGAAGTTGCTCGAGCAGCAACGCATACTGTTTTGGCCTCCTGTGGATTGGAACATTCACC ATCGGTAGCTCTTGCACTCCCAAGACCGGTTTGCAAGCACACCTGCAAAACTGAACCTCT CCCATCTCCAGATGTACTGACCGATTTTTGCAGAGAATGCTTGTGTAATTTTGTAAAAGA AGTCATCAGCTCATTGTTGTCTGGCAGGAAGATGGAGTGAACTGCTTCATCATGTTAGAA TAGTTTAGAAACCTACATACAGTTGTGGTTTTCTTTCCTGTAGTTACTTAAGGTGAAACA TCCTGCAACAGATAGTGTAGACAGTGTAGACATGTTGTACATTCTGTACCATGTTAAGGT TAGTGTAGACATGTACATTCTATACCGTGTTAAGGTTATCATTACAGAGCAGTTTTTTTC