Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0275900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:9400936:9408380:1 gene:Os06g0275900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adaptor protein kanadaptin description:Forkhead-associated domain containing protein. (Os06t0275900-01);Similar to FHA domain protein. (Os06t0275900-02)
Sequence	ATGGACCCCTCCATGCCTCCGCCTCCACCTCGAAACCCTAACCCCTCCTCCGCCTCCATG CCGCCCCCCCCGCCACCGCCCAAGTTGGAGCCGGCGTCCAAGCCCGAATCCACTAACCCT AACTCCTCCATGCCGCCGCCTCCGCCTCCACTCCCGGTGGAGGGTGCGAGCACTAGCTCC TCTATGCCTCCGCCTCCGCCGCCACGGCCCGCGGCGCCGCCGCAGCCGGAGGTGGAGGGG GCGGACGCGTCGGCCGAAGGGGGCACTAGCGCTAGCGATTCCGAGGCGGATGAGGCGGCG GGGAACTTAGGTAGGGGCTCCAGGGATATTGAGATGGCGGAGGCGGCGGCGCCGCCGCCA TCACAGCAGCAGCAGCCGAGGCCGCGTGCCCCGTACGCCATACCCGAGTGGAGCGCCGCA CCGGGCCACCCCTTCTTCCTCGAGGTTCTCAAGGACGGCACCATCGTTGACAAGCTTGAC GTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATTGATCTTTGCGATTTTGTATTGGAG CATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAGTTTAGAAATGATGGGGAGGTTTTC CTTTATGATCTTGGAAGCACACATGGGTCCTTCATCAATAAAACTCAGGTCAAGAAGAAG ATATATGTGGAAATTCATGTTGGAGATGTAATTCGATTTGGGCAATCATCACGTTTGTAC ATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAAAAAGATATGCAGAAGCTTCGGGAT GCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCTTCCCTTTTACGTGCAAAAAATCAA GCAGCTTTAGCAGAGGGTATCTCATGGGGTATGTCTGAGGATGCAGTCGAAGATTCTGCA GAGGATGAAGCTGATGAGATCACATGGCAAACCTACAAAGGTCAACTCACTGATAGACAG GAGAAAACACGAAGCAAAATAATAAAGCGATTGGAAAAGATTACCAACATGAAGAAAGAA ATTGATGCAATAAGAGCTAAGGACATTTCTCAAGGTGGGTTAACCCAAGGTCAACAAACA CAGATTGCACGGAATGAGCAAAGGACATCTCAGCTTATGGAGGAGCTGGAAAATTTAGAA GAAACTTTGAATGACAGTATACGGGAAAGTCTTGGTGCTCGCACTGGAAACTCAAATCGT GGTAGTCATAAAGCAAGTCTTGAGGAAGAAGATGACATTCTTAGTGACGAAGATGACTTC TATGATCGGACGAAGAAGAAATCTTCTAGTCATAAATCCAGTGAGCAGCAAGTGGAGACT GCTGATAGTCTTCTTGATAAAAAAGATACCATAACCAGCGATATTGAAAGTAAAAAGAAA TTGGTTGAAGAAGAGAAGAATAAGTTGGCAAAAAGTGAGAATGCGGATGTTGGGGACGAC CTTGATGCTTACATGAGTGGATTATCATCTCAATTAGTACATGACAAGATTGCCCAAATC CAGAAGGAGCTTTCTGATCTTCAAACTGAGCTGGGCAGGGTGGTTTACCTACTGAAAATA GCTGATCCTATGGGAGAAGCAGCTCGCAAGAGGGATCTCAAGCCACGAGAAACAAAATCT CCAGCATCTAATGATAGTCTAAGACCAGAGTCCAGAAAGCAAAACAAAGTTGCACAAAAC AAAGCCTCAACAGAGGAGAAGCTTAAGGAATCTTGTGCTGAAAAAACACAAGTGGATAAA CCAGCCGAGGAAGAGAAGGGTATCTCCACAAACCAAGAAAATGGCAGCAAACCTGCATTC TCCATTCCAAAACCTCAGTGGCTTGGTGACAAGAGGACCGTGGAATCTGAAGAGAACTGT ATAAAAGAAGAAAGTGCCAATGAAGAGGAGACTGATAATTTTGTGGACTACAAAGATCGA AAAACTATTCTTTCAGGTTCCGCCAATGGAAAAGACCTTGAAGAAGCTGCTCCTGGGCTT ATTTTACGGAAGAGAAAGTCTGATCAATCAGCAGCCAATGAGGTGGAATCTTCAGTTGAA TCCGAAGCATCTGCTGCTGATGCTGTGGCCCTCTTGCTGAAGCACAAACGTGGTTTACAA ACTTCTGAAGATATGGAGGATGAGAATGAACCACAAGCTAGCAAGAGAAAAAGTAAAAAG TCGAAACAAAAACGCGTACTGGGTCCAGCAAGACCAGATTTTCTGGACGCAGGTCCAGAT CATGAAACATGGGTGCCACCTGAAGGTCAAACTGGTGATGGCCGCACTTCATTGAACGAT CGTCTGGGCTACTGA

Peptide Sequence

PEP ID	Os06t0275900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:9400936:9408380:1 gene:Os06g0275900 transcript:Os06t0275900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adaptor protein kanadaptin description:Forkhead-associated domain containing protein. (Os06t0275900-01);Similar to FHA domain protein. (Os06t0275900-02)
Sequence	MDPSMPPPPPRNPNPSSASMPPPPPPPKLEPASKPESTNPNSSMPPPPPPLPVEGASTSS SMPPPPPPRPAAPPQPEVEGADASAEGGTSASDSEADEAAGNLGRGSRDIEMAEAAAPPP SQQQQPRPRAPYAIPEWSAAPGHPFFLEVLKDGTIVDKLDVSRKGAYMFGRIDLCDFVLE HPTISRFHAVLQFRNDGEVFLYDLGSTHGSFINKTQVKKKIYVEIHVGDVIRFGQSSRLY IFQGPSELMPPEKDMQKLRDARVQQDMLDREASLLRAKNQAALAEGISWGMSEDAVEDSA EDEADEITWQTYKGQLTDRQEKTRSKIIKRLEKITNMKKEIDAIRAKDISQGGLTQGQQT QIARNEQRTSQLMEELENLEETLNDSIRESLGARTGNSNRGSHKASLEEEDDILSDEDDF YDRTKKKSSSHKSSEQQVETADSLLDKKDTITSDIESKKKLVEEEKNKLAKSENADVGDD LDAYMSGLSSQLVHDKIAQIQKELSDLQTELGRVVYLLKIADPMGEAARKRDLKPRETKS PASNDSLRPESRKQNKVAQNKASTEEKLKESCAEKTQVDKPAEEEKGISTNQENGSKPAF SIPKPQWLGDKRTVESEENCIKEESANEEETDNFVDYKDRKTILSGSANGKDLEEAAPGL ILRKRKSDQSAANEVESSVESEASAADAVALLLKHKRGLQTSEDMEDENEPQASKRKSKK SKQKRVLGPARPDFLDAGPDHETWVPPEGQTGDGRTSLNDRLGY

Transcript Sequence

Transcript ID	Os06t0275900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:9400936:9408380:1 gene:Os06g0275900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Adaptor protein kanadaptin description:Forkhead-associated domain containing protein. (Os06t0275900-01);Similar to FHA domain protein. (Os06t0275900-02)
Sequence	TCTCGCCGCCTTCTTCCCCCTTGTCGCCGTCGCCGAGCCGCCTCCGCCTCACCGTGCCGA CCACCACCTCTCCCAACCTCGCCGTCGAATCCTCTCTCTCTCTCTCGTCTCCCCGCTTCG CTTCCACCTCGCACTCACACTCCCATGGACCCCTCCATGCCTCCGCCTCCACCTCGAAAC CCTAACCCCTCCTCCGCCTCCATGCCGCCCCCCCCGCCACCGCCCAAGTTGGAGCCGGCG TCCAAGCCCGAATCCACTAACCCTAACTCCTCCATGCCGCCGCCTCCGCCTCCACTCCCG GTGGAGGGTGCGAGCACTAGCTCCTCTATGCCTCCGCCTCCGCCGCCACGGCCCGCGGCG CCGCCGCAGCCGGAGGTGGAGGGGGCGGACGCGTCGGCCGAAGGGGGCACTAGCGCTAGC GATTCCGAGGCGGATGAGGCGGCGGGGAACTTAGGTAGGGGCTCCAGGGATATTGAGATG GCGGAGGCGGCGGCGCCGCCGCCATCACAGCAGCAGCAGCCGAGGCCGCGTGCCCCGTAC GCCATACCCGAGTGGAGCGCCGCACCGGGCCACCCCTTCTTCCTCGAGGTTCTCAAGGAC GGCACCATCGTTGACAAGCTTGACGTGTCCAGGAAAGGAGCTTACATGTTTGGTCGAATT GATCTTTGCGATTTTGTATTGGAGCATCCCACTATTTCTCGCTTTCATGCTGTTTTGCAG TTTAGAAATGATGGGGAGGTTTTCCTTTATGATCTTGGAAGCACACATGGGTCCTTCATC AATAAAACTCAGGTCAAGAAGAAGATATATGTGGAAATTCATGTTGGAGATGTAATTCGA TTTGGGCAATCATCACGTTTGTACATATTCCAAGGACCATCTGAGCTGATGCCCCCTGAA AAAGATATGCAGAAGCTTCGGGATGCTAGAGTTCAGCAAGATATGCTTGATCGTGAAGCT TCCCTTTTACGTGCAAAAAATCAAGCAGCTTTAGCAGAGGGTATCTCATGGGGTATGTCT GAGGATGCAGTCGAAGATTCTGCAGAGGATGAAGCTGATGAGATCACATGGCAAACCTAC AAAGGTCAACTCACTGATAGACAGGAGAAAACACGAAGCAAAATAATAAAGCGATTGGAA AAGATTACCAACATGAAGAAAGAAATTGATGCAATAAGAGCTAAGGACATTTCTCAAGGT GGGTTAACCCAAGGTCAACAAACACAGATTGCACGGAATGAGCAAAGGACATCTCAGCTT ATGGAGGAGCTGGAAAATTTAGAAGAAACTTTGAATGACAGTATACGGGAAAGTCTTGGT GCTCGCACTGGAAACTCAAATCGTGGTAGTCATAAAGCAAGTCTTGAGGAAGAAGATGAC ATTCTTAGTGACGAAGATGACTTCTATGATCGGACGAAGAAGAAATCTTCTAGTCATAAA TCCAGTGAGCAGCAAGTGGAGACTGCTGATAGTCTTCTTGATAAAAAAGATACCATAACC AGCGATATTGAAAGTAAAAAGAAATTGGTTGAAGAAGAGAAGAATAAGTTGGCAAAAAGT GAGAATGCGGATGTTGGGGACGACCTTGATGCTTACATGAGTGGATTATCATCTCAATTA GTACATGACAAGATTGCCCAAATCCAGAAGGAGCTTTCTGATCTTCAAACTGAGCTGGGC AGGGTGGTTTACCTACTGAAAATAGCTGATCCTATGGGAGAAGCAGCTCGCAAGAGGGAT CTCAAGCCACGAGAAACAAAATCTCCAGCATCTAATGATAGTCTAAGACCAGAGTCCAGA AAGCAAAACAAAGTTGCACAAAACAAAGCCTCAACAGAGGAGAAGCTTAAGGAATCTTGT GCTGAAAAAACACAAGTGGATAAACCAGCCGAGGAAGAGAAGGGTATCTCCACAAACCAA GAAAATGGCAGCAAACCTGCATTCTCCATTCCAAAACCTCAGTGGCTTGGTGACAAGAGG ACCGTGGAATCTGAAGAGAACTGTATAAAAGAAGAAAGTGCCAATGAAGAGGAGACTGAT AATTTTGTGGACTACAAAGATCGAAAAACTATTCTTTCAGGTTCCGCCAATGGAAAAGAC CTTGAAGAAGCTGCTCCTGGGCTTATTTTACGGAAGAGAAAGTCTGATCAATCAGCAGCC AATGAGGTGGAATCTTCAGTTGAATCCGAAGCATCTGCTGCTGATGCTGTGGCCCTCTTG CTGAAGCACAAACGTGGTTTACAAACTTCTGAAGATATGGAGGATGAGAATGAACCACAA GCTAGCAAGAGAAAAAGTAAAAAGTCGAAACAAAAACGCGTACTGGGTCCAGCAAGACCA GATTTTCTGGACGCAGGTCCAGATCATGAAACATGGGTGCCACCTGAAGGTCAAACTGGT GATGGCCGCACTTCATTGAACGATCGTCTGGGCTACTGAAGTTTTCACATTCAAGACTCG ACTCGATGCGTCATGAAGAAGAATTCAGTAGCGACGATCGCGGTATTACTGCAGCTAGTC CTTGAGCATGCGTTTCATATAACTTCAAATGGAAACTGGCCCCTTTTTATTAGTTGCTCG CCATTTCCTGAGACTGTAGTAGAGGCTGTGTAAGATTGCGAATTTGTAGAAAATGAGAGT TGAAATGACAGGTGGTGGATCTGTATGGGAATGGTGTCACCTGTCCAGGGGTCACAAAGG ATGCAAATGTCATTTTCAGTTCGCTACGAGAATGGGGTGGGATTTTGTAATGTACATCAT CGTCCCATAGTATAACGGTTGTTTGGTGCC