Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0275600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:9364131:9367997:1 gene:Os06g0275600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 086, Transcriptional Activator protein 1 description:Similar to TA1 protein (Fragment). (Os06t0275600-01);Hypothetical conserved gene. (Os06t0275600-02)
Sequence	ATGAATGAGAAGGACGCCACTGATTTGGAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAA GCTCTGAGTTTCCATGGTGGTGCCATGTTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCA GCTGCAAATAATGCATTGACCTCCATGGCGAATCCTTTCCCTATCCCTCCTGGGTTGTGG AATCCACCTTCACACAACATGGGTTTAGGCGAAACCAGTTTTTCATCCTTGTTGGGGATG CTGTCGGCCGGCGCGCCGCCACCGTTTGTGGCTACTCCCGGGTTTGTAGATTCCACGGCG GGGTTTCCTTGCTACAATGGAGGCAATCTTGGAGCCATGATCAATCACCCTTTCCCTGGT ATCCACCAGCCTTTGGGTGATTTCCAAAACGGCGTCGAGCCATGTAGGGAGATTGAGGAT ATTGAGATTGAAGGATCCAAGAATGTGTCACAAACTGGTGAGAAGCAGCAAGGGGATGGT GAGACAACGCATGCCGTCGATTCCTCCTCCAAGGAGCTAAGCATGCCAGGGCGCAATGGT GGCGCTGGCCATGATGAGGGGACTAGGGTGTCTTGTTCCAAGAAGAGGAAAAGATCAGGA CAGGATGGTGGGGTGAAGCATGCAGAAGGTGGTGAGCAATTAGCAACTGTCGGTTCAGCG CAGAAGAATGAGGATGATGAAAAGGGTGAACCAAAGAGGTCTTCTGTGGCGTCCGGGAAA TCCAGTGGGAAGCAAATAAAGGATAATGCAGGTTCACCAAAGGAAGACTATATACATGTA AGAGCACGGCGCGGTCAGGCTACAAACAGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAG AAGATCAGTGAAAGGATGAAATATCTTCAGGATCTTGTTCCTGGTTGTAGTAAAGTAACT GGTAAGGCTGTTATGCTGGATGAGATAATTAACTATGTTCAATCATTACAGAGGCAGGTT GAGTTTTTGTCGATGAAGCTAGCAAGTGTCAATCCAACACTGGACTTCAACATAGAACGC ATTTTATCTAAAGATATTTTTCAATGTCGAGGCACTACTGCATCATCTGCCTTTGGCTTC TTCCCAGACATTGTTCATCCCCGATTACACCCACCAAAATATACACAAGTTGGGATGCCC AGCATTGTGAACCCCACTGATGCATTTGGAAGAGTAATCCATGCTCCATTAGGAACTAAC AGTGCATTCAAAGAACCTAAACATCAGATGCCCAACAATTTGAATGGAGAGTTCCAGGAC GTCATTGAGATGCCTTTTACTCATGACCATCATGGATCAAATGATCAACCCTGA

Peptide Sequence

PEP ID	Os06t0275600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:9364131:9367997:1 gene:Os06g0275600 transcript:Os06t0275600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 086, Transcriptional Activator protein 1 description:Similar to TA1 protein (Fragment). (Os06t0275600-01);Hypothetical conserved gene. (Os06t0275600-02)
Sequence	MNEKDATDLEERSEASEHGQALSFHGGAMFLQEAQIASPAAANNALTSMANPFPIPPGLW NPPSHNMGLGETSFSSLLGMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPG IHQPLGDFQNGVEPCREIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNG GAGHDEGTRVSCSKKRKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGK SSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVT GKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGF FPDIVHPRLHPPKYTQVGMPSIVNPTDAFGRVIHAPLGTNSAFKEPKHQMPNNLNGEFQD VIEMPFTHDHHGSNDQP

Transcript Sequence

Transcript ID	Os06t0275600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:9364131:9367997:1 gene:Os06g0275600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 086, Transcriptional Activator protein 1 description:Similar to TA1 protein (Fragment). (Os06t0275600-01);Hypothetical conserved gene. (Os06t0275600-02)
Sequence	AAACTGATCAGATCACACACTTCAGACTACAGTCAAACAGAGCCCTTGCTTGCTTTGCTT GTGTCTTCAACTTCAGAGACCCCCTCCTACCCTCAAAAAATTTCCCCTTTCTTTTCCTCC GTTTCTTGCAGCGACAAGAGAAATACTAATACTCCTCCTCCTACTACTGCTACTGTGCAA GGGGAAGGACACGACGACGAATTGGAGAGCGGCGTCCTCTCTGATCCTTTTTTTTCCTTT ATTGCATCTCTCTCTCTCTCTCGCCATTTTTCTTCTAGGTTGGTCTCTGGATCAGGCCAT TGAGGGGGAAAGAAAAGGTGCGGGTTTTGGGGGGAGGTTGTTCTTGCGGGAGGCCGTTGA TTTCGCCGTGTGATCGGAGGGAGTGAAAAGGAGATGAATGAGAAGGACGCCACTGATTTG GAGGAGAGGAGTGAGGCCAGTGAGCACGGCCAAGCTCTGAGTTTCCATGGTGGTGCCATG TTCTTGCAAGAGGCTCAGATTGCTTCTCCTGCAGCTGCAAATAATGCATTGACCTCCATG GCGAATCCTTTCCCTATCCCTCCTGGGTTGTGGAATCCACCTTCACACAACATGGGTTTA GGCGAAACCAGTTTTTCATCCTTGTTGGGGATGCTGTCGGCCGGCGCGCCGCCACCGTTT GTGGCTACTCCCGGGTTTGTAGATTCCACGGCGGGGTTTCCTTGCTACAATGGAGGCAAT CTTGGAGCCATGATCAATCACCCTTTCCCTGGTATCCACCAGCCTTTGGGTGATTTCCAA AACGGCGTCGAGCCATGTAGGGAGATTGAGGATATTGAGATTGAAGGATCCAAGAATGTG TCACAAACTGGTGAGAAGCAGCAAGGGGATGGTGAGACAACGCATGCCGTCGATTCCTCC TCCAAGGAGCTAAGCATGCCAGGGCGCAATGGTGGCGCTGGCCATGATGAGGGGACTAGG GTGTCTTGTTCCAAGAAGAGGAAAAGATCAGGACAGGATGGTGGGGTGAAGCATGCAGAA GGTGGTGAGCAATTAGCAACTGTCGGTTCAGCGCAGAAGAATGAGGATGATGAAAAGGGT GAACCAAAGAGGTCTTCTGTGGCGTCCGGGAAATCCAGTGGGAAGCAAATAAAGGATAAT GCAGGTTCACCAAAGGAAGACTATATACATGTAAGAGCACGGCGCGGTCAGGCTACAAAC AGCCATAGTCTTGCCGAAAGGGTTAGGAGGGAGAAGATCAGTGAAAGGATGAAATATCTT CAGGATCTTGTTCCTGGTTGTAGTAAAGTAACTGGTAAGGCTGTTATGCTGGATGAGATA ATTAACTATGTTCAATCATTACAGAGGCAGGTTGAGTTTTTGTCGATGAAGCTAGCAAGT GTCAATCCAACACTGGACTTCAACATAGAACGCATTTTATCTAAAGATATTTTTCAATGT CGAGGCACTACTGCATCATCTGCCTTTGGCTTCTTCCCAGACATTGTTCATCCCCGATTA CACCCACCAAAATATACACAAGTTGGGATGCCCAGCATTGTGAACCCCACTGATGCATTT GGAAGAGTAATCCATGCTCCATTAGGAACTAACAGTGCATTCAAAGAACCTAAACATCAG ATGCCCAACAATTTGAATGGAGAGTTCCAGGACGTCATTGAGATGCCTTTTACTCATGAC CATCATGGATCAAATGATCAACCCTGAGATTGATTCCACAACTGAAGCAAGAGATCAATA TGTGCCATGGGCTTTCAGCAAAACTGTGATATATGAGCATGTTGATATCATGGTACTAGC TCACAGCTGATCACTGAAGTATAAGCATCCAAAATGCTTAGTTAGTGCTATTTTTCTCAT GTTCATAGCAGCAATTGACCTCCTGTGGAAGCCTCTCTTTGGATGTTCCATTTGCTGTTA TAGAAAGTTGGGAGATAAAAAAAAAAGGATGTTCACATGGAGATCTCAAGCAATTTGTTC TCCACTGAAGTAGTCTACAGTCTTGAAATGGCGAGAAGCTTCATTTTGCAAGAAGGTGAT TTTTCTGTGGTCTCGTCAACCCCAGGATTATTACATACACTAGCTAGCATTGTGAGGCTA CAGAAATTGTTCTTTGTTGTACTTGCTTAGCCCATGTTCCATCTGACAAGCAACATAGGC AGAAATGCAGTCACTGATTTTGTATTTGTTGAAAAAAAAAATAAATGGGCTTGGCCTGAT GTAGCAAGCATTTGAATTTTGCAACGGGTGCATATTGGCACAGATGTTTTTATTCCAGCA AAGCTGTGAATTCTGAAAGAGAAGAAAAGAGAACTGTGATC