Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0274500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:9315991:9323826:1 gene:Os06g0274500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERK-like gene 2, Somatic Embryogenesis Protein Kinase 1, bri1-associated receptor kinase 1 (BAK1) homologue 7 description:Similar to SERK1 (Fragment). (Os06t0274500-01)
Sequence	ATGGAGCCGCCCTTCTTCCTCCTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCC GCCGCCCTCCTCTCCGCCAAGGGCGTCAACAACGAAGTGCAAGCTCTGATTGTGATCAAG AACCTGCTCAAGGACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCC TGCAGCTGGGCCATGATCACCTGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCA AGCCAGCATCTCTCTGGCCTGCTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACT GTTCTCCTGCAGAACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAG AACCTCAAGACGCTTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTG GGCCACCTCGAGAGCCTCCAGTACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTC CCTTCTGCATCAGCTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTG AGTGGCCCGATTCCAGAATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATC TGCGACGCCAACAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGC CTGAACGGCTCGCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTC GCCGTCGCGTTCGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTC CTCTTCTGGTGGCGCCACCGCCGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAG ATTGAGAACGTGAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCG ACGGAGGGGTTCAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGG GGGCAGCTCCCCGACGGGACGCTGGTGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCC GGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAAC CTCCTCCGCCTCTACGGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTC ATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACG AGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGAC CCCAAGATCATCCACCGCGACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAG GCCGTCGTCGGCGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACC ACGGCGGTGCGGGGCACCGTCGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCG TCGGACCGGACCGACGTCTTCGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAG ACGGCGCTCGAGTTCGGCAAGTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAG AAGATGCAGTCGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTAC GACCGGGTGGAGGTGGAGGAGATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCC GCCCACCGCCCCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGAC CGCTGGGAGAAGGCCTCCGGCCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCAC CGCACCTCAGACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTC TCCGACCTCACCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGA TAA

Peptide Sequence

PEP ID	Os06t0274500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:9315991:9323826:1 gene:Os06g0274500 transcript:Os06t0274500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERK-like gene 2, Somatic Embryogenesis Protein Kinase 1, bri1-associated receptor kinase 1 (BAK1) homologue 7 description:Similar to SERK1 (Fragment). (Os06t0274500-01)
Sequence	MEPPFFLLLLLLVVSSSSPSAALLSAKGVNNEVQALIVIKNLLKDPHGVLKSWDQNSVDP CSWAMITCSPDFLVTGLEAPSQHLSGLLSPSIGNLTNLETVLLQNNNITGPIPAEIGRLE NLKTLDLSSNSFYGEIPSSVGHLESLQYLRLNNNTLSGPFPSASANLSHLVFLDLSYNNL SGPIPESLARTYNIVGNPLICDANREQDCYGTAPMPMSYSLNGSRGGALPPAARDRGHKF AVAFGSTAGCMGLLLLAAGFLFWWRHRRNRQILFDVDEQQIENVNLGNVKRFSFRELQAA TEGFSGKNILGKGGFGNVYRGQLPDGTLVAVKRLKDGNAAGGEAQFQTEVEMISLALHRN LLRLYGFCMTATERLLVYPFMSNGSVASRLKAKPALEWGTRRRIAVGAARGLVYLHEQCD PKIIHRDVKAANVLLDEACEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQS SDRTDVFGFGILLLELVTGQTALEFGKSSNHKGAMLDWVKKMQSEKKVEVLVDKGLGGGY DRVEVEEMVQVALLCTQYLPAHRPRMSDVVRMLEGDGLADRWEKASGHSTAAADSLSHSH RTSDPAPPAADFAAAFGRCFSDLTDDSSLLVQAVELSGPR

Transcript Sequence

Transcript ID	Os06t0274500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:9315991:9323826:1 gene:Os06g0274500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERK-like gene 2, Somatic Embryogenesis Protein Kinase 1, bri1-associated receptor kinase 1 (BAK1) homologue 7 description:Similar to SERK1 (Fragment). (Os06t0274500-01)
Sequence	GTTAGTTCGAGCGCACACACACAATCACACATTGCACGCGCAGACGCAGCCACTGCTTCT TCTTCCTCCTCTTCTCCCAGGAAAGAGCTCACCTGACCTGACCACCTGAGGTTGTAGTTG CTGGTTTGCTTGCTAGCTTCGTCGTCTCCTCCTACCTGAGCTCAGCAATGGAGCCGCCCT TCTTCCTCCTCCTGCTGCTGCTCGTGGTCTCCTCCTCCTCCCCTTCCGCCGCCCTCCTCT CCGCCAAGGGCGTCAACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGG ACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCA TGATCACCTGCTCCCCGGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCT CTGGCCTGCTCTCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGA ACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGC TTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGA GCCTCCAGTACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAG CTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGATTC CAGAATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAACA GGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGC GGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCG GCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGC GCCACCGCCGCAACCGGCAGATCCTCTTTGACGTCGACGAGCAGCAGATTGAGAACGTGA ACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCA GCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCG ACGGGACGCTGGTGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCC AGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCT ACGGCTTCTGCATGACCGCCACCGAGCGCCTCCTAGTCTACCCCTTCATGTCCAACGGCA GCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCG CGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCC ACCGCGACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTCGTCGGCG ACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGCGGG GCACCGTCGGCCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGACCG ACGTCTTCGGCTTCGGCATCCTGCTGCTGGAGCTCGTCACCGGCCAGACGGCGCTCGAGT TCGGCAAGTCGTCCAACCACAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGTCGG AGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGG TGGAGGAGATGGTGCAGGTGGCTCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCC GCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGG CCTCCGGCCACTCCACCGCCGCCGCCGACTCCCTCTCCCACTCCCACCGCACCTCAGACC CGGCGCCGCCCGCCGCCGACTTCGCCGCCGCCTTCGGCCGCTGCTTCTCCGACCTCACCG ACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAACACCACCATG ATCGAGTAGCTGTGGTGTGTGGCTCTTCTTGTACAGCATGCTTGCATGGAGCTCTCTGTC TTTCTGTCTGAATATTAATGTAGCTAGCTAGGTTGGGAAATACTTCCCTGTTTCATATTA TAAAACTTTTTAGCATTACCCATACATTCATATATATATGTTAATAAATCTAGATATATA TGTATGCCTAGATTTATTAACATCTATATGAATGAATGTGGGCAATGCTAGAAAGTTTTA TAACCTGAAATGGAGGTAGTAATAATTATATTTTACTAAGGTAATTACTAATTAGTGATG CGTATATATTTATATCATTTTAGATGAACTGTACAAACACAAGAGGAGAGGACAAGGACT TGTACTTTTCCGTGTCTCCATATATACTTGATGTTAAT