Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0269300-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:8977430:8981486:-1 gene:Os06g0269300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-02)
Sequence	ATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCGCGCTG CTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGGTGGTG ACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCAAATCG ACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGGGCGGG TACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACGTCGAG GTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACAGGGTC CAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAGGATTA TCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGATTTACA GTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAAAGATC AGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACCTAGAT GGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCAGTAGC TGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCCACAAT GATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTTTTGCT GCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGGTATCA ACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCATATCAG AAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTGGGAAA CATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAAAATCA TCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATCACCTT CAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATGATGAG ACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCATGACG AAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAACGGCTGGGAC ATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACCTGCAG CAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGACGACA AACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGGAGATC AAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCAACAAT TACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAA

Peptide Sequence

PEP ID	Os06t0269300-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:8977430:8981486:-1 gene:Os06g0269300 transcript:Os06t0269300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-02)
Sequence	MAVRRRRRRSRAAAVLVAALLLAASAATASAASSYPAKVVTGLLSSTASAVVKQLWSLKS TATRTGSAAAGRSMVKYEGGYAVETVFDGSKLGIEPHDVEVTPSGELLVLDSMNSNVYRV QLPLSRYSRPKLVAGSPEGLSGHVDGRLREAKMNHPKGFTVDDRGNIYVADAMNMAIRKI SDTGVTTIAGGKSMRGGHLDGPSDDAKFSTDFEIRYISSSCSLLVIDRGNQAIREIALHN DDCEYQYEAGFPLGIALLFAAGFFGYMLALLQRQVLGMVSTADEPQTPPRPSIASIPPYQ KPLKPSLRPPLIPTEDQAGKHEAEEGFFTSIGKLIGGAKSSAVEIFSRKKRPTHQYHHHL QQQRANPWPVQESYAIPHDETPPPLDMRAATPRKNYAFMTKEPEKVHHVRHGRPYFNGWD MQHAPQQQPEQQMYHQQHLQQHRQYSAGPQTFYEQSCETTNEIVFGAVQEVDTKRRMVEI KAVNYGDTFYEQYGMRYRNNYIGYNNSSNGNNNSYYY

Transcript Sequence

Transcript ID	Os06t0269300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:8977430:8981486:-1 gene:Os06g0269300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-02)
Sequence	GCATTTCCTCCCATAGCTCGCATTCGCATTCGCATCGCACTCACCCTCTCCTGCAAGCAA AGCTAAAGCTTCGGTTTGGTTATTTCCTTTCCTCGCCGCTTTTTTCTTTGCTTCTTGCGG TGGCCATGGCGGTAAGGAGGAGGAGGAGGAGGAGTAGAGCCGCGGCGGTTCTGGTGGCCG CGCTGCTTCTCGCCGCCTCCGCCGCCACCGCCTCCGCGGCGTCGTCTTACCCCGCGAAGG TGGTGACCGGGTTGCTGTCCAGCACGGCGTCGGCGGTGGTGAAGCAGCTCTGGTCGCTCA AATCGACCGCCACAAGGACGGGGTCGGCGGCGGCGGGGAGGTCGATGGTGAAGTACGAGG GCGGGTACGCGGTGGAGACGGTGTTCGACGGCAGCAAGCTGGGGATCGAGCCGCACGACG TCGAGGTCACCCCCTCCGGCGAGCTCCTCGTGCTCGACTCCATGAACAGCAACGTCTACA GGGTCCAGCTGCCTCTGTCGCGATATAGCAGACCGAAGCTTGTTGCTGGTTCGCCGGAAG GATTATCCGGCCATGTCGACGGGAGGCTGCGGGAGGCGAAGATGAACCATCCGAAGGGAT TTACAGTGGACGATAGGGGAAACATTTATGTTGCAGATGCTATGAATATGGCAATAAGAA AGATCAGTGATACAGGGGTTACAACCATTGCTGGGGGGAAATCAATGAGAGGTGGGCACC TAGATGGGCCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAATTCGCTACATCAGCA GTAGCTGCTCCCTCTTGGTTATTGATAGAGGAAACCAAGCAATTCGCGAGATTGCACTCC ACAATGATGACTGTGAATATCAGTATGAAGCTGGTTTTCCACTAGGCATTGCATTGCTTT TTGCTGCTGGTTTCTTTGGGTACATGCTTGCATTGCTTCAGCGACAGGTTTTAGGGATGG TATCAACAGCAGATGAACCTCAGACTCCTCCAAGACCCAGCATTGCAAGCATCCCTCCAT ATCAGAAGCCACTAAAGCCTTCGCTTCGGCCTCCACTGATCCCAACCGAAGATCAAGCTG GGAAACATGAGGCTGAAGAGGGGTTCTTCACCTCAATCGGCAAGCTCATCGGAGGAGCAA AATCATCTGCGGTAGAGATATTCTCACGAAAGAAACGCCCAACCCATCAGTACCATCATC ACCTTCAGCAGCAAAGAGCCAACCCTTGGCCGGTGCAAGAAAGTTACGCCATCCCACATG ATGAGACACCGCCACCATTGGACATGAGAGCAGCTACTCCTCGGAAGAACTACGCCTTCA TGACGAAGGAGCCTGAAAAAGTTCACCATGTCCGCCATGGCCGGCCTTACTTCAACGGCT GGGACATGCAGCATGCCCCTCAGCAACAGCCAGAGCAGCAGATGTACCACCAGCAGCACC TGCAGCAGCACAGGCAGTACTCCGCAGGCCCGCAAACTTTCTACGAGCAGAGCTGCGAGA CGACAAACGAGATCGTCTTTGGTGCTGTCCAGGAGGTGGACACCAAGCGGCGAATGGTGG AGATCAAGGCCGTGAACTATGGGGACACATTCTATGAGCAGTACGGGATGCGGTATCGCA ACAATTACATCGGCTACAACAACAGCAGCAACGGCAACAACAACAGCTACTACTATTAAA CAACCAACCCTTCTGCCCTCAATTTTCCCCCTCTCTCTTTATCCCTGTTTCTTTCCTATA TGATTAGATTTACCGCTCGCGTTTTCGCTTCTCCTGACCTCCGCGACGCCTGTAACAAAA GAAAGAAAAAGCGGGGGGGAAGTAGAGGCACTAATCTTCTTCAGTCCTGACCTGTGCAAT GCAATGGCAAACACCTGGGGAGGGGTTTTTGTACT