Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0268700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:8955691:8959653:1 gene:Os06g0268700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0268700-01)
Sequence

ATGGAGCACGCCTCCTCGCCGCGCGCCCATGGCGTGGTGGTGATCGCGGTCGCCCCGGAC
CACGACGACGACAGCGGCAAGAAGGGGTGGCGTCTCGCCGCCGCCGCCGCCCCCGCCTTC
GGGGACGAGGCGGGGTTCGGGGTGGAGGAAGAGGAGGAGGAGGGGGAGGAGGAGGAGGAG
GAGGTGAGGTGGAGGGAGCGGCGGGTGGCGTCGCTGTGGCGCGTGGCCGGGGCGCTGCTG
GTGGTCGCGGCGCTCGCGGTGGCGGGGCACTACTGCCTGTACCACGACCCGGCGGCGTTC
TCGCGGGAGGAGGGGAGGTCGTCGTTCTTGCTGCCGCTGTACCCGAAGTCCAGCGGGGGC
GGCGCGGCGGGGGAGTCGGCCGGTAGCGTCAAGCCGGACGGCGCCGGCGCGGAGGCGAGG
GAGAATTCGTCGGCGCTGCTCCCGATCAGAGGCAATGTGTTCCCCGACGGGCAATATTAC
ACTTCTATGTACATTGGGAATCCTCCAAGACCTTATTTTCTTGATGTTGATACCGGAAGC
GACTTGACATGGATACAGTGTGATGCACCCTGCACAAACTGTGCAAAGGGACCTCATCCT
CTGTATAAGCCTGAGAAACCAAATGTGGTTCCTCCGAGAGATTCATATTGTCAAGAACTG
CAGGGCAACCAGAACTATGGTGACACTAGCAAGCAATGTGACTATGAGATCACTTATGCC
GATCGGAGCTCCTCTATGGGAATCCTTGCAAGGGACAACATGCAACTGATCACTGCAGAC
GGTGAAAGGGAAAATTTGGACTTCGTATTTGGGTGTGGATATGATCAGCAAGGAAATCTT
TTGTCGTCGCCAGCAAACACTGATGGGATCCTGGGCTTGAGCAATGCAGCAATAAGCCTT
CCTACCCAGCTAGCCAGCCAAGGGATAATTTCCAATGTTTTTGGCCATTGCATCGCGGCA
GATCCCAGCAATGGTGGATATATGTTTCTTGGTGACGATTACGTTCCTAGATGGGGAATG
ACATGGATGCCTATCAGAAATGGTCCAGAGAACCTATACAGCACAGAAGTCCAGAAAGTG
AACTATGGAGATCAGCAGCTTAATGTGCGACGAAAGGCAGGGAAGTTAACTCAAGTGATA
TTTGACAGTGGGAGCTCATATACGTATTTACCACACGACGACTACACAAACCTGATTGCT
TCACTTAAAAGTCTCTCTCCAAGCCTTTTACAAGATGAGTCGGATCGAACACTACCGTTC
TGCATGAAACCCAATTTTCCAGTGAGGTCTATGGATGATGTGAAACACCTGTTCAAACCC
TTGAGTCTGGTATTCAAAAAAAGATTGTTCATCTTGCCAAGGACATTCGTTATCCCCCCT
GAGGACTACTTAATCATCAGTGATAAGAACAATATCTGCCTAGGAGTGTTGGATGGAACA
GAGATTGGTCATGACTCAGCGATAGTAATCGGAGATGTTTCCCTTCGAGGAAAGCTAGTT
GTATATAACAATGATGAGAAGCAGATAGGATGGGTTCAGTCAGACTGTGCCAAGCCACAG
AAACAAAGTGGATTTCCTTTCCTCTTTAAAAGAGTGCTGCAAAATCAACTTTTGTAA

Peptide Sequence

PEP ID

Os06t0268700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:8955691:8959653:1 gene:Os06g0268700 transcript:Os06t0268700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0268700-01)
Sequence

MEHASSPRAHGVVVIAVAPDHDDDSGKKGWRLAAAAAPAFGDEAGFGVEEEEEEGEEEEE
EVRWRERRVASLWRVAGALLVVAALAVAGHYCLYHDPAAFSREEGRSSFLLPLYPKSSGG
GAAGESAGSVKPDGAGAEARENSSALLPIRGNVFPDGQYYTSMYIGNPPRPYFLDVDTGS
DLTWIQCDAPCTNCAKGPHPLYKPEKPNVVPPRDSYCQELQGNQNYGDTSKQCDYEITYA
DRSSSMGILARDNMQLITADGERENLDFVFGCGYDQQGNLLSSPANTDGILGLSNAAISL
PTQLASQGIISNVFGHCIAADPSNGGYMFLGDDYVPRWGMTWMPIRNGPENLYSTEVQKV
NYGDQQLNVRRKAGKLTQVIFDSGSSYTYLPHDDYTNLIASLKSLSPSLLQDESDRTLPF
CMKPNFPVRSMDDVKHLFKPLSLVFKKRLFILPRTFVIPPEDYLIISDKNNICLGVLDGT
EIGHDSAIVIGDVSLRGKLVVYNNDEKQIGWVQSDCAKPQKQSGFPFLFKRVLQNQLL

Transcript Sequence

Transcript ID

Os06t0268700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:8955691:8959653:1 gene:Os06g0268700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os06t0268700-01)
Sequence

GCCGCGACTCCCAAACCTTTCGATCATCTCTTCGACTTCGTCGGAGTCGGAGTCCGAGTC
CACCGCCTCGCCGGAGATGGAGCACGCCTCCTCGCCGCGCGCCCATGGCGTGGTGGTGAT
CGCGGTCGCCCCGGACCACGACGACGACAGCGGCAAGAAGGGGTGGCGTCTCGCCGCCGC
CGCCGCCCCCGCCTTCGGGGACGAGGCGGGGTTCGGGGTGGAGGAAGAGGAGGAGGAGGG
GGAGGAGGAGGAGGAGGAGGTGAGGTGGAGGGAGCGGCGGGTGGCGTCGCTGTGGCGCGT
GGCCGGGGCGCTGCTGGTGGTCGCGGCGCTCGCGGTGGCGGGGCACTACTGCCTGTACCA
CGACCCGGCGGCGTTCTCGCGGGAGGAGGGGAGGTCGTCGTTCTTGCTGCCGCTGTACCC
GAAGTCCAGCGGGGGCGGCGCGGCGGGGGAGTCGGCCGGTAGCGTCAAGCCGGACGGCGC
CGGCGCGGAGGCGAGGGAGAATTCGTCGGCGCTGCTCCCGATCAGAGGCAATGTGTTCCC
CGACGGGCAATATTACACTTCTATGTACATTGGGAATCCTCCAAGACCTTATTTTCTTGA
TGTTGATACCGGAAGCGACTTGACATGGATACAGTGTGATGCACCCTGCACAAACTGTGC
AAAGGGACCTCATCCTCTGTATAAGCCTGAGAAACCAAATGTGGTTCCTCCGAGAGATTC
ATATTGTCAAGAACTGCAGGGCAACCAGAACTATGGTGACACTAGCAAGCAATGTGACTA
TGAGATCACTTATGCCGATCGGAGCTCCTCTATGGGAATCCTTGCAAGGGACAACATGCA
ACTGATCACTGCAGACGGTGAAAGGGAAAATTTGGACTTCGTATTTGGGTGTGGATATGA
TCAGCAAGGAAATCTTTTGTCGTCGCCAGCAAACACTGATGGGATCCTGGGCTTGAGCAA
TGCAGCAATAAGCCTTCCTACCCAGCTAGCCAGCCAAGGGATAATTTCCAATGTTTTTGG
CCATTGCATCGCGGCAGATCCCAGCAATGGTGGATATATGTTTCTTGGTGACGATTACGT
TCCTAGATGGGGAATGACATGGATGCCTATCAGAAATGGTCCAGAGAACCTATACAGCAC
AGAAGTCCAGAAAGTGAACTATGGAGATCAGCAGCTTAATGTGCGACGAAAGGCAGGGAA
GTTAACTCAAGTGATATTTGACAGTGGGAGCTCATATACGTATTTACCACACGACGACTA
CACAAACCTGATTGCTTCACTTAAAAGTCTCTCTCCAAGCCTTTTACAAGATGAGTCGGA
TCGAACACTACCGTTCTGCATGAAACCCAATTTTCCAGTGAGGTCTATGGATGATGTGAA
ACACCTGTTCAAACCCTTGAGTCTGGTATTCAAAAAAAGATTGTTCATCTTGCCAAGGAC
ATTCGTTATCCCCCCTGAGGACTACTTAATCATCAGTGATAAGAACAATATCTGCCTAGG
AGTGTTGGATGGAACAGAGATTGGTCATGACTCAGCGATAGTAATCGGAGATGTTTCCCT
TCGAGGAAAGCTAGTTGTATATAACAATGATGAGAAGCAGATAGGATGGGTTCAGTCAGA
CTGTGCCAAGCCACAGAAACAAAGTGGATTTCCTTTCCTCTTTAAAAGAGTGCTGCAAAA
TCAACTTTTGTAAATGTCACATAGAAATTGAAATTTACCACCAGCTCGACTGACCATGCT
TTACTTTTGGACGTGCAAATTCTACGTTCAAAGCTGCCATAATCAATATCAGTGAAAGTA
ATTAAACAGGACATAGGGTAAAAAGAAGATGTAAGTAGAGATAGCCAGTAAGTATGTTGT
ACTTAGTAATTTGTCTCTTCTGTATACACAAAGAAGCAGAATTATGTATATGTATTTTGT
AGAATATATCTCAACCACCTGTAAAGAGTATATCTCATCCACTTGTAAGACTAAGTGGTG
AAGCATATATCAGTGAAGCCATGGCATTTCTCGTTC