Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0264200-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:8704897:8706342:1 gene:Os06g0264200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 17, CCT domain-containing gene 20, CCT (CO, CO-LIKE and TOC1) domain protein 20, CCT domain protein 20 description:Zinc finger, B-box domain containing protein. (Os06t0264200-00)
Sequence	ATGAGCAGCACGGCGAAGGCGGCGGCCGCCGGGGCGGTGGGTGCCAAGTCGGCGCGGGCG TGCGACGGCTGCCTGCGCCGGCGGGCGAGGTGGTACTGCGCGGCGGACGACGCGTTCCTG TGCCAGGGGTGCGACACGTCGGTGCACTCCGCGAACCCGCTCGCGCGGCGCCACGAGCGG CTGCGGCTGCGGCCGTCGTCGCCGCCGCCGCTGGTGCCGCCGTCGGGGTCGGGGCGGCGC GACGAGGCCGTCCCCGCGGCGTGGTTCAAGCGCAAGGCGCGGACCCCGCGGTCGCACGCC GCCAAGAGCGCCGCCGCCTTCGGGCAGCTGCTGTCGAGGCGGCTCGTCGTCGTTCCCGAG GCGGCGGCTGGTAGTGGAGGGGACTCGCCGGAGGAGCGGAAGGACGAGGGGGAGATCGTG GAGGAGCAGGAGCAGCTGCTGTACCGCGTCCCCATCTTTGACCCGGCCCTCTCGGAGTTC TGCTCGCCGCCTCCCCTCGAGGACGCGGCGGCCGCCGTGTCCTGCTGCAATGAGGACGGC GCCGTCGAGAACCCGACGAAGCCGTCCATGACGACGACGACGGCTACAACGCCACCGCTC CAGTTCTTCCCCGACGGCCAAGCCAATTTCGGGCCGACCGACGCCGAGCTGAGGGAGTTC GCCGCCGACATGGAGGCCCTCCTCGGGCGTGGCCTGGACGACGGCAACGACGAGGACTCC TTCTGCATGGAGACGCTGGGGCTCATCGAGCCGGTGGACGACGACGCCGGGCGGGTCAAG GTGGAGGCCGACGGCGACGCCGGGATGACCCTAGCGTGGTGCCACGAGCTGGACACGGAG ACATCGTCCGGCGAGATGCTGGACATCGACTTCGACTGCGGCTCACCTCAGGCGGCGACG ACACCCGACGAGAAGGTCGGGAGCAGCGGGCCCGCCGCCGCCGACGACGACGCGCAGCTC CAGCAGAGCAACCTCGCCCTCAGCCTCAACTACGAGGCCATCATCGAGAGCTGGGGGACC TCGCCGTGGACCGACGGCGAGCGGCCGCACGTCAAGCTCGACGACTCCTGGCCCCGCGAT TACTCGGTACGTGCCACGCCATGCACACCGTACGCCTCGTCTCACCGTATACTCCACAAT TTAGCTGGTACTGATGACTTGCTCCGGCGACGTGCGGCGGTGCAGGGGGTGTGGATGGCG GCGGCAGGGGTGTTCGGGCACGGCGGCGAGGAGCAGGCGCTGACGCCGAGGCTGGGGATG GACGGCGGCAGGGAGGCGCGGGTGTCGAGGTACAGGGAGAAGCGGCGGACGCGGCTCTTC TCCAAGAAGATCCGGTACGAGGTGCGCAAGCTCAACGCCGAGAAGCGGCCGCGGATGAAG GGCCGCTTCGTCAAGCGCGCCGCCGCCGCCGCCACCGCCGCCGTCGCCACGGCGTGCGTC GCGTAG

Peptide Sequence

PEP ID	Os06t0264200-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:8704897:8706342:1 gene:Os06g0264200 transcript:Os06t0264200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 17, CCT domain-containing gene 20, CCT (CO, CO-LIKE and TOC1) domain protein 20, CCT domain protein 20 description:Zinc finger, B-box domain containing protein. (Os06t0264200-00)
Sequence	MSSTAKAAAAGAVGAKSARACDGCLRRRARWYCAADDAFLCQGCDTSVHSANPLARRHER LRLRPSSPPPLVPPSGSGRRDEAVPAAWFKRKARTPRSHAAKSAAAFGQLLSRRLVVVPE AAAGSGGDSPEERKDEGEIVEEQEQLLYRVPIFDPALSEFCSPPPLEDAAAAVSCCNEDG AVENPTKPSMTTTTATTPPLQFFPDGQANFGPTDAELREFAADMEALLGRGLDDGNDEDS FCMETLGLIEPVDDDAGRVKVEADGDAGMTLAWCHELDTETSSGEMLDIDFDCGSPQAAT TPDEKVGSSGPAAADDDAQLQQSNLALSLNYEAIIESWGTSPWTDGERPHVKLDDSWPRD YSVRATPCTPYASSHRILHNLAGTDDLLRRRAAVQGVWMAAAGVFGHGGEEQALTPRLGM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRAAAAATAAVATACV A

Transcript Sequence

Transcript ID	Os06t0264200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:8704897:8706342:1 gene:Os06g0264200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 17, CCT domain-containing gene 20, CCT (CO, CO-LIKE and TOC1) domain protein 20, CCT domain protein 20 description:Zinc finger, B-box domain containing protein. (Os06t0264200-00)
Sequence	ATGAGCAGCACGGCGAAGGCGGCGGCCGCCGGGGCGGTGGGTGCCAAGTCGGCGCGGGCG TGCGACGGCTGCCTGCGCCGGCGGGCGAGGTGGTACTGCGCGGCGGACGACGCGTTCCTG TGCCAGGGGTGCGACACGTCGGTGCACTCCGCGAACCCGCTCGCGCGGCGCCACGAGCGG CTGCGGCTGCGGCCGTCGTCGCCGCCGCCGCTGGTGCCGCCGTCGGGGTCGGGGCGGCGC GACGAGGCCGTCCCCGCGGCGTGGTTCAAGCGCAAGGCGCGGACCCCGCGGTCGCACGCC GCCAAGAGCGCCGCCGCCTTCGGGCAGCTGCTGTCGAGGCGGCTCGTCGTCGTTCCCGAG GCGGCGGCTGGTAGTGGAGGGGACTCGCCGGAGGAGCGGAAGGACGAGGGGGAGATCGTG GAGGAGCAGGAGCAGCTGCTGTACCGCGTCCCCATCTTTGACCCGGCCCTCTCGGAGTTC TGCTCGCCGCCTCCCCTCGAGGACGCGGCGGCCGCCGTGTCCTGCTGCAATGAGGACGGC GCCGTCGAGAACCCGACGAAGCCGTCCATGACGACGACGACGGCTACAACGCCACCGCTC CAGTTCTTCCCCGACGGCCAAGCCAATTTCGGGCCGACCGACGCCGAGCTGAGGGAGTTC GCCGCCGACATGGAGGCCCTCCTCGGGCGTGGCCTGGACGACGGCAACGACGAGGACTCC TTCTGCATGGAGACGCTGGGGCTCATCGAGCCGGTGGACGACGACGCCGGGCGGGTCAAG GTGGAGGCCGACGGCGACGCCGGGATGACCCTAGCGTGGTGCCACGAGCTGGACACGGAG ACATCGTCCGGCGAGATGCTGGACATCGACTTCGACTGCGGCTCACCTCAGGCGGCGACG ACACCCGACGAGAAGGTCGGGAGCAGCGGGCCCGCCGCCGCCGACGACGACGCGCAGCTC CAGCAGAGCAACCTCGCCCTCAGCCTCAACTACGAGGCCATCATCGAGAGCTGGGGGACC TCGCCGTGGACCGACGGCGAGCGGCCGCACGTCAAGCTCGACGACTCCTGGCCCCGCGAT TACTCGGTACGTGCCACGCCATGCACACCGTACGCCTCGTCTCACCGTATACTCCACAAT TTAGCTGGTACTGATGACTTGCTCCGGCGACGTGCGGCGGTGCAGGGGGTGTGGATGGCG GCGGCAGGGGTGTTCGGGCACGGCGGCGAGGAGCAGGCGCTGACGCCGAGGCTGGGGATG GACGGCGGCAGGGAGGCGCGGGTGTCGAGGTACAGGGAGAAGCGGCGGACGCGGCTCTTC TCCAAGAAGATCCGGTACGAGGTGCGCAAGCTCAACGCCGAGAAGCGGCCGCGGATGAAG GGCCGCTTCGTCAAGCGCGCCGCCGCCGCCGCCACCGCCGCCGTCGCCACGGCGTGCGTC GCGTAG