Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0262800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:8598245:8599912:-1 gene:Os06g0262800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Very-long-chain fatty acid condensing enzyme CUT1. (Os06t0262800-01)
Sequence	ATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGT GCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCT CTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATC AGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTC GTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAAC TGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAG CGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGC CTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGT GCCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTC AGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCG TTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTG TCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCAG GTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACCATCACGCCCAACTAC TACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTCCGCATGGGCGGCGCG GCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTGAAGCACGTCGTGCGC ACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTCCAGGAGGAGGACGAGCAC GGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGACCATCGCCGGCAACGCGCTCAAG GCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGGCGTCGGAGCAGCTCAAGTTCGCG CTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGGTCAAGCCGTACATCCCGGACTTC CGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGCGGGCGGTGATCGACGAGCTG CAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGGCGTCGCGGATGGCGCTCCACCGA TTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGA CGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAAC AGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACGACGACGGGCCGTGGGCCACGTCG ATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAG

Peptide Sequence

PEP ID	Os06t0262800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:8598245:8599912:-1 gene:Os06g0262800 transcript:Os06t0262800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Very-long-chain fatty acid condensing enzyme CUT1. (Os06t0262800-01)
Sequence	MSMAARFLDSLKATYQYYHRAMGNVLVAVPAAAGALVTVALLAPEAESTTVAIGRLRELI RPAHLFLAVFLPAAAATVYLVMRPRAVYLVDYACFRTAPNCRVPFATFLEHARQVPTLTE RSVRFMTRLLERSGLGEETCLPPAHHYIPTYKYCTLEAARAEVDLVVFSAVDELFAKTGV SPDDVDILVVNCSLFCPTPSFVDMIVNRYKLRSDIRSMHLSGMGCSASLISIGLARNLLQ VAPHGARALVVSTETITPNYYVGNERAMLLPNCLFRMGGAAALLSTSPAKARFRLKHVVR TLTGAEDSAHHCVFQEEDEHGSIGINLSKDLMTIAGNALKANITAIAPLVLPASEQLKFA LAFIARKALSGRVKPYIPDFRAAFEHFCIHAGGRAVIDELQRSLCLSDEQVQASRMALHR FGNTSSSSVWYELAYVEAKGRMRRGDRVWMIGFGSGFKCNSAAWECISPARDDDGPWATS IHRYPVDIPDVLKH

Transcript Sequence

Transcript ID	Os06t0262800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:8598245:8599912:-1 gene:Os06g0262800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Very-long-chain fatty acid condensing enzyme CUT1. (Os06t0262800-01)
Sequence	CGGGGAACCAACAAACCAACACACATCCAACGAAAGGGTGAGCAACCAAACTTTAACTGT ACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGG CTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTG CTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGA TCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGG CCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACG CGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGA GGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGT CGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGT ACTGCACCCTCGAGGCCGCCCGTGCCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACG AGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCA GCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGA GCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCG GCCTCGCGAGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCA CGGAGACCATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACT GCCTCTTCCGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGT TCCGGCTGAAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCG TGTTCCAGGAGGAGGACGAGCACGGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGA CCATCGCCGGCAACGCGCTCAAGGCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGG CGTCGGAGCAGCTCAAGTTCGCGCTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGG TCAAGCCGTACATCCCGGACTTCCGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCG GGCGGGCGGTGATCGACGAGCTGCAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGG CGTCGCGGATGGCGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGC TGGCCTACGTCGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCT TCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACG ACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCA AGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGA AAACTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGCGTTCTTTCC