Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0257600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:8236902:8238699:1 gene:Os06g0257600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 82 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0257600-01)
Sequence

ATGGCAGCACTCGCCGCCGTCGCCGTTCTCGTCGTCGCCATGGTTATCAGTGGCGGTGGC
GGCGTCGCCGCGGCGGTGACATCCAAGAAGCCAGTGATCTACATCTTCGGCGACTCGATG
TCCGACGTCGGGAACAACAACTACCTCATCCTCTCGCTCGCGAAGTCCGATTACCCCTGG
TACGGCGTCGACTACGAGACCGGATTCCCCACCGGGCGGTTCACCAATGGCAGGACCATC
GGGGACATCATGGCCGCCAAGTTTGGCGTCCCGCCGCCGCCGCCGTTCCTGTCGTTGTAC
ATGACCGACGACGAGGTGCTCGGCGGCGTCAACTTCGCGTCCGGCGGCGCCGGCCTCCTC
AACGAGACCGGCATTTACTTCGTTCAGTACCTGTCGTTCGACAACCAGATATCGTCGTTC
GAGGAGATCAAGAACGCCATGATCGCCAAGATTGGCAAGAAGGCCGCAGAGGAGGTAGTC
AATGGCGCCATCTTCCAAGTCGGCCTTGGGAGCAACGACTACATCAACAACTTCTTGCGG
CCGTTCATGGCGGACGGCATCGTGTACACCCACGAAGAGTTCATCGGCCTCCTCATGGAC
ACCATGGACAGGCAGCTCACAAGGCTGTACGATCTCGGGGCGCGCAACGTGTGGTTCAGC
GGGCTCGCCCCGCTCGGCTGCATCCCGTCGCAGCGCGTCCTCTCCGACGACGGCGGGTGC
CTGGACGACGTGAACGCGTACGCGGTGCAGTTCAACGCCGCCGCCAGGAACCTCCTCGAG
CGGCTCAACGCGAAGCTCCCCGGCGCGAGCATGTCCCTCGCCGACTGCTACTCCGTCGTC
ATGGAGCTCATCGAGCACCCGCAGAAGTACGGGTTCAAGACGTCGCACACGTCGTGCTGC
GACGTGGACACGACGGTGGGCGGGCTGTGCCTGCCGACGGCGCAGCTCTGCGACGACCGC
ACGGCGTTCGTGTTCTGGGACGCCTACCACACCTCCGACGCTGCCAACCAGGTCATCGCC
GACCGCCTCTACGCCGACATGGTGAGCGCCGGCGCCGTACAGGGGAACGGGAACGCCACC
ACCGCCGCCGCCGCCTCCACCCCCGCGCCTCGCGTCGTCGTGGGCGGCGGCGCGTCGCCG
TCGACCCACGCCGCGCCGCCTCCAAAGCCTTAG

Peptide Sequence

PEP ID

Os06t0257600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:8236902:8238699:1 gene:Os06g0257600 transcript:Os06t0257600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 82 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0257600-01)
Sequence

MAALAAVAVLVVAMVISGGGGVAAAVTSKKPVIYIFGDSMSDVGNNNYLILSLAKSDYPW
YGVDYETGFPTGRFTNGRTIGDIMAAKFGVPPPPPFLSLYMTDDEVLGGVNFASGGAGLL
NETGIYFVQYLSFDNQISSFEEIKNAMIAKIGKKAAEEVVNGAIFQVGLGSNDYINNFLR
PFMADGIVYTHEEFIGLLMDTMDRQLTRLYDLGARNVWFSGLAPLGCIPSQRVLSDDGGC
LDDVNAYAVQFNAAARNLLERLNAKLPGASMSLADCYSVVMELIEHPQKYGFKTSHTSCC
DVDTTVGGLCLPTAQLCDDRTAFVFWDAYHTSDAANQVIADRLYADMVSAGAVQGNGNAT
TAAAASTPAPRVVVGGGASPSTHAAPPPKP

Transcript Sequence

Transcript ID

Os06t0257600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:8236902:8238699:1 gene:Os06g0257600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 82 description:Esterase, SGNH hydrolase-type domain containing protein. (Os06t0257600-01)
Sequence

AGGCCAAGAATCACCAGCACACACACTGTCACACACAAAGAAAGAAAAGGAGCTAGCAAT
GGCAGCACTCGCCGCCGTCGCCGTTCTCGTCGTCGCCATGGTTATCAGTGGCGGTGGCGG
CGTCGCCGCGGCGGTGACATCCAAGAAGCCAGTGATCTACATCTTCGGCGACTCGATGTC
CGACGTCGGGAACAACAACTACCTCATCCTCTCGCTCGCGAAGTCCGATTACCCCTGGTA
CGGCGTCGACTACGAGACCGGATTCCCCACCGGGCGGTTCACCAATGGCAGGACCATCGG
GGACATCATGGCCGCCAAGTTTGGCGTCCCGCCGCCGCCGCCGTTCCTGTCGTTGTACAT
GACCGACGACGAGGTGCTCGGCGGCGTCAACTTCGCGTCCGGCGGCGCCGGCCTCCTCAA
CGAGACCGGCATTTACTTCGTTCAGTACCTGTCGTTCGACAACCAGATATCGTCGTTCGA
GGAGATCAAGAACGCCATGATCGCCAAGATTGGCAAGAAGGCCGCAGAGGAGGTAGTCAA
TGGCGCCATCTTCCAAGTCGGCCTTGGGAGCAACGACTACATCAACAACTTCTTGCGGCC
GTTCATGGCGGACGGCATCGTGTACACCCACGAAGAGTTCATCGGCCTCCTCATGGACAC
CATGGACAGGCAGCTCACAAGGCTGTACGATCTCGGGGCGCGCAACGTGTGGTTCAGCGG
GCTCGCCCCGCTCGGCTGCATCCCGTCGCAGCGCGTCCTCTCCGACGACGGCGGGTGCCT
GGACGACGTGAACGCGTACGCGGTGCAGTTCAACGCCGCCGCCAGGAACCTCCTCGAGCG
GCTCAACGCGAAGCTCCCCGGCGCGAGCATGTCCCTCGCCGACTGCTACTCCGTCGTCAT
GGAGCTCATCGAGCACCCGCAGAAGTACGGGTTCAAGACGTCGCACACGTCGTGCTGCGA
CGTGGACACGACGGTGGGCGGGCTGTGCCTGCCGACGGCGCAGCTCTGCGACGACCGCAC
GGCGTTCGTGTTCTGGGACGCCTACCACACCTCCGACGCTGCCAACCAGGTCATCGCCGA
CCGCCTCTACGCCGACATGGTGAGCGCCGGCGCCGTACAGGGGAACGGGAACGCCACCAC
CGCCGCCGCCGCCTCCACCCCCGCGCCTCGCGTCGTCGTGGGCGGCGGCGCGTCGCCGTC
GACCCACGCCGCGCCGCCTCCAAAGCCTTAGACGTGCAGACAACAGATCGATCGGCCGCC
GTTGCGCCGGCACAACGCCGTCGCCTTTTCGTGTGATTCGAGCCCCAGTCATATCTGATC
TCCATTGTCGGATGAGTTAAACAACAAGTGTTTGATGAAATGATGAGTAGTGTCGCGATT
GTTCAACCAACGTTTTCCGAGTCAAAATCATGCATGAGATTTCCCG