Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0256900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:8178991:8184548:-1 gene:Os06g0256900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B3 description:Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os06t0256900-01)
Sequence	ATGGCGGCGGCGGGCGGTGCTGTGCTGCTGCTGGTGCTGGCGACCGCGACTTCGGTGACA GGGCAGCATGACTACAGCGACGCGCTCCACAAGAGCATCCTGTTCTTCGAGGGCCAGCGC TCCGGCCGCCTGCCACCCGACCAGCGCCTCCGCTGGCGCCGTGACTCCGCCCTCAACGAC GGCGCCACCGCCGGCGTGGACCTGACGGGAGGGTACTACGACGCCGGCGACAACGTGAAG TTCGGGTTCCCGATGGCGTTCACGGCGACGCTCATGTCGTGGGGGCTGATCGACTTCGGG CGGAGCTTCGGGGCGCACGCGGCGGAGGCGAGGGAGGCGGTGCGGTGGGCGACGGACTAC CTGATGAAGGCGACGGCGACGCCCAACACGGTGTACGTCCAGGTCGGCGACGCCTTCCGC GACCACTCCTGCTGGGAGCGCCCCGAGGACATGGACACCCCGCGCACCGTCTACAAGGTC GACCCCTCCCACCCCGGCTCCGACGTCGCCGCCGAGACCGCCGCCGCCCTCGCCGCCGCC TCCATCGTCTTCCGCGACGCCGACCCCGACTACTCCAACCGCCTCCTCGACCGCGCCATC CAGGTGTTCGAGTTCGCGGACAAGTACAGGGGCCCATACAGCAGCAGCCTGCACGCGGCC GTGTGCCCCTGCTACTGCGACTACTCCGGCTACAAGGACGAGTTGCTGTGGGGCGCGGCG TGGCTGCACAAGGCGTCGCGGCGCCGGGAGTACCGCGACTACATCAAGCGGAACGAGGTG GTGCTCGGCGCCAGCGAGGCCATCAACGAGTTCGGCTGGGACAACAAGCACGCCGGCATC AACGTCCTCATCTCCAAGGAGGTCCTGATGGGGAAGGACGAGTATTTCCAGTCGTTCCGC GTGAACGCCGACAACTTCATCTGCACCCTCCTCCCCGGCATCTCTAATCATCCCCAGATC CAGTACTCCCCAGGTGGGCTGCTGTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACG TCGCTGTCGTTCCTCCTCCTCGCATACTCCAACTATCTCAGCCACGCCAACGTCCGCGTC CCCTGCGGCACCTCCTCCGCCTCCCCCGTCCAGCTCCGACGCGTCGCCAAGCGCCAGGTG GACTACATCCTGGGCGACAACCCGCTGCGGATGTCGTACATGGTGGGTTACGGGTCGAGG TACCCGCTGCGGATCCACCACCGGGGGAGCTCGCTGCCGTCGGTGGCGGCGCACCCGGCG CAGATCGGGTGCAAGGCCGGGGCGACCTACTACGCCAGCGCGGCGCCCAACCCGAACCTC CTGGTGGGCGCCGTGGTGGGCGGGCCCAGCAACACCAGCGACGCGTTCCCCGACGCGCGG GCCGTGTTCCAGCAGTCCGAGCCCACCACGTACATCAACGCCCCGCTCCTCGGCCTCCTC GCCTACTTCTCGGCCCACCCCAACCTGGCCCAGTCCGATCTCCTCTACGACTGA

Peptide Sequence

PEP ID	Os06t0256900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:8178991:8184548:-1 gene:Os06g0256900 transcript:Os06t0256900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B3 description:Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os06t0256900-01)
Sequence	MAAAGGAVLLLVLATATSVTGQHDYSDALHKSILFFEGQRSGRLPPDQRLRWRRDSALND GATAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGAHAAEAREAVRWATDY LMKATATPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAA SIVFRDADPDYSNRLLDRAIQVFEFADKYRGPYSSSLHAAVCPCYCDYSGYKDELLWGAA WLHKASRRREYRDYIKRNEVVLGASEAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR VNADNFICTLLPGISNHPQIQYSPGGLLFKVGNSNMQHVTSLSFLLLAYSNYLSHANVRV PCGTSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGSRYPLRIHHRGSSLPSVAAHPA QIGCKAGATYYASAAPNPNLLVGAVVGGPSNTSDAFPDARAVFQQSEPTTYINAPLLGLL AYFSAHPNLAQSDLLYD

Transcript Sequence

Transcript ID	Os06t0256900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:8178991:8184548:-1 gene:Os06g0256900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B3 description:Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os06t0256900-01)
Sequence	AACTAAACCACCACCACCACCACCCCCCGCCGAGACAGTGACACTCTCCTTCCGCGGCAA TGGCGGCGGCGGGCGGTGCTGTGCTGCTGCTGGTGCTGGCGACCGCGACTTCGGTGACAG GGCAGCATGACTACAGCGACGCGCTCCACAAGAGCATCCTGTTCTTCGAGGGCCAGCGCT CCGGCCGCCTGCCACCCGACCAGCGCCTCCGCTGGCGCCGTGACTCCGCCCTCAACGACG GCGCCACCGCCGGCGTGGACCTGACGGGAGGGTACTACGACGCCGGCGACAACGTGAAGT TCGGGTTCCCGATGGCGTTCACGGCGACGCTCATGTCGTGGGGGCTGATCGACTTCGGGC GGAGCTTCGGGGCGCACGCGGCGGAGGCGAGGGAGGCGGTGCGGTGGGCGACGGACTACC TGATGAAGGCGACGGCGACGCCCAACACGGTGTACGTCCAGGTCGGCGACGCCTTCCGCG ACCACTCCTGCTGGGAGCGCCCCGAGGACATGGACACCCCGCGCACCGTCTACAAGGTCG ACCCCTCCCACCCCGGCTCCGACGTCGCCGCCGAGACCGCCGCCGCCCTCGCCGCCGCCT CCATCGTCTTCCGCGACGCCGACCCCGACTACTCCAACCGCCTCCTCGACCGCGCCATCC AGGTGTTCGAGTTCGCGGACAAGTACAGGGGCCCATACAGCAGCAGCCTGCACGCGGCCG TGTGCCCCTGCTACTGCGACTACTCCGGCTACAAGGACGAGTTGCTGTGGGGCGCGGCGT GGCTGCACAAGGCGTCGCGGCGCCGGGAGTACCGCGACTACATCAAGCGGAACGAGGTGG TGCTCGGCGCCAGCGAGGCCATCAACGAGTTCGGCTGGGACAACAAGCACGCCGGCATCA ACGTCCTCATCTCCAAGGAGGTCCTGATGGGGAAGGACGAGTATTTCCAGTCGTTCCGCG TGAACGCCGACAACTTCATCTGCACCCTCCTCCCCGGCATCTCTAATCATCCCCAGATCC AGTACTCCCCAGGTGGGCTGCTGTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGT CGCTGTCGTTCCTCCTCCTCGCATACTCCAACTATCTCAGCCACGCCAACGTCCGCGTCC CCTGCGGCACCTCCTCCGCCTCCCCCGTCCAGCTCCGACGCGTCGCCAAGCGCCAGGTGG ACTACATCCTGGGCGACAACCCGCTGCGGATGTCGTACATGGTGGGTTACGGGTCGAGGT ACCCGCTGCGGATCCACCACCGGGGGAGCTCGCTGCCGTCGGTGGCGGCGCACCCGGCGC AGATCGGGTGCAAGGCCGGGGCGACCTACTACGCCAGCGCGGCGCCCAACCCGAACCTCC TGGTGGGCGCCGTGGTGGGCGGGCCCAGCAACACCAGCGACGCGTTCCCCGACGCGCGGG CCGTGTTCCAGCAGTCCGAGCCCACCACGTACATCAACGCCCCGCTCCTCGGCCTCCTCG CCTACTTCTCGGCCCACCCCAACCTGGCCCAGTCCGATCTCCTCTACGACTGAAAATCTG ACGGCCCAACACAAGTGGCCTTCCCCGTTTTGCATTGGCCGTAGTGGGCCGATTTGATCG AGTAATTGGTTAGTAATTTAGTATTGATCCTGTAGCGTGTGCCGATCCTTTCCTGTAAAA AATGGCAGGAACGGGGATTGGTCGTAGCGTGGTTGTATGCACTGTACCCTAGCATTTTAG TAGCAATTTAGCGTATGCTGGATGCGATGTCTTATTGGCATCAGATGTCCATCCGGCTAT GCGATGCATTCTGTTCGGCTATCTACTCTAAGCATCCTTTGTCAAGTGTCAAGGGGGCCG GAATTAGTGCCAGGATTAAGCTTTAAGCTAAGCATATCTGTAACGTCGTCGTCCACAAGA CATGTCATGTGCAGCATTGGGCCTTTTTCCGGCTTTTGGGATTACTCCTCGCTGGAATCC AAAGCTTTGCTTGAAGCAGGCAGCTATTCTCGT