Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0256500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:8152444:8159313:1 gene:Os06g0256500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOGLUCOISOMERASE 2 description:Similar to Glucose-6-phosphate isomerase. (Os06t0256500-01)
Sequence	ATTCAATCGCAGGAAGCGAAGCGCGGATCCGCTTCCTCATCCACCGATCGCCCCCTCCTT CATCCTCCGGTAGCAGTCATGGCGTCGTCGGCGCTAATCTGCGACACCGAGCAGTGGAAG GGCCTCCAGGCGCACGTCGGGGCGATTCAGAAGACGCACCTGCGCGATCTGATGGATGAT GCCGAGCGCTGCAAGGCAATGACAGCTGAGTATGAAGGCATATTTCTGGATTACTCGAGG CAGCGTGCAACTGGCGAGACCATGGAGAAGCTGTTTAAATTGGCAGAGGCGGCAAAGCTC AAGGAGAAGATTGAGAAGATGTTTAGTGGTGACAAGATAAATAGCACAGAGAACAGATCT GTGCTTCATGTAGCTCTAAGGGCTCCAAGAGACGAAGTAATAAAAAGTGATGGGGTCAAT GTGGTTCCCGAAGTTTGGGGTGTAAAAGATAAAATCAAGCAGTTTTCAGAAACTTTTAGG AGTGGATCATGGGTTGGGGCAACTGGTAAAGCATTGACAAATGTTGTGTCAGTTGGAATA GGTGGTAGCTTTCTTGGTCCTCTGTTCGTGCATGCTGCCCTCCAGACAGATCCAGAAGCT GCAGAATCTGCCAAAGGGCGACAGTTAAGATTCCTTGCAAATGTTGACCCTGTTGATGTT GCACGAAGCATCAAAGATTTAGATCCTGAAACAACACTTGTTGTGGTTGTCTCAAAGACC TTCACAACAGCTGAAACAATGTTAAATGCTCGAACTCTCAAGGAGTGGATTGTCTCTTCT CTTGGACCTGATGCTGTTGCGAAACATATGATTGCTGTCAGTACCAATCTTGAGCTTGTG GAGAAGTTTGGAATTGACCCTAAAAATGCTTTTGCATTTTGGGACTGGGTTGGTGGTCGC TATAGTGTTTGCAGTGCTGTTGGTGTCCTGCCCTTATCTCTTCAATATGGTTTTCCGATT GTTCAGAAATTTTTGGAGGGTGCAGCCAGCATCGACAAACACTTCCGTTCATCTTCATTT GAGAAAAACATACCTGTACTCCTTGGTTTGCTGAGTGTGTGGAATGTTTCCTTTCTTGGA TATCCAGCTAGAGCAATATTGCCCTATTCCCAGGCACTTGAGAAATTTGCACCACATATT CAGCAGCTTAGCATGGAGAGTAATGGAAAGGGTGTCTCTATTGATGGCGTTCAATTGTCC TTTGAGACTGGTGAAATTGATTTTGGTGAACCTGGAACCAATGGGCAACACAGCTTCTAT CAATTAATCCATCAGGGAAGAGTTATTCCTTGTGATTTTATCGGCGTCGTGAAAAGCCAG CAACCCGTTTACTTGAAAGGGGAAATTGTGAGCAATCATGACGAATTGATGTCCAATTTC TTTGCTCAGCCTGATGCACTTGCTTATGGAAAGACCCCTGAACAACTGCACAGCGAGAAA GTACCTGAACATCTTATCTCTCATAAGACTTTTCAGGGCAACCGACCATCACTTAGTTTA TTGCTGCCCTCATTATCTGCTTATGAGATTGGACAGCTTTTATCCATCTACGAGCACCGG ATTGCAGTTCAGGGTTTCCTATGGGGAATAAACTCATTTGACCAGTGGGGAGTGGAACTG GGAAAGTCTCTGGCTTCTCAAGTGAGAAAATCTCTGCATGCATCCCGCATGGAAGGAAAG CCTGTCCAGGGGTTCAACAGCAGCACTGCAAGTTTGCTGACACGATATCTCGCTGTTGAG CCATCCACTCCTTACAACACTACAACAATGCCGAAAGTTTAA

Peptide Sequence

PEP ID	Os06t0256500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:8152444:8159313:1 gene:Os06g0256500 transcript:Os06t0256500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOGLUCOISOMERASE 2 description:Similar to Glucose-6-phosphate isomerase. (Os06t0256500-01)
Sequence	IQSQEAKRGSASSSTDRPLLHPPVAVMASSALICDTEQWKGLQAHVGAIQKTHLRDLMDD AERCKAMTAEYEGIFLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFSGDKINSTENRS VLHVALRAPRDEVIKSDGVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKALTNVVSVGI GGSFLGPLFVHAALQTDPEAAESAKGRQLRFLANVDPVDVARSIKDLDPETTLVVVVSKT FTTAETMLNARTLKEWIVSSLGPDAVAKHMIAVSTNLELVEKFGIDPKNAFAFWDWVGGR YSVCSAVGVLPLSLQYGFPIVQKFLEGAASIDKHFRSSSFEKNIPVLLGLLSVWNVSFLG YPARAILPYSQALEKFAPHIQQLSMESNGKGVSIDGVQLSFETGEIDFGEPGTNGQHSFY QLIHQGRVIPCDFIGVVKSQQPVYLKGEIVSNHDELMSNFFAQPDALAYGKTPEQLHSEK VPEHLISHKTFQGNRPSLSLLLPSLSAYEIGQLLSIYEHRIAVQGFLWGINSFDQWGVEL GKSLASQVRKSLHASRMEGKPVQGFNSSTASLLTRYLAVEPSTPYNTTTMPKV

Transcript Sequence

Transcript ID	Os06t0256500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:8152444:8159313:1 gene:Os06g0256500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOGLUCOISOMERASE 2 description:Similar to Glucose-6-phosphate isomerase. (Os06t0256500-01)
Sequence	ACAGAGACGAAAGACACGGGGAAATAAACAAACAAACCAAAAAAAATAAAATCGAGAAAA AAGTGGAGATATAAATTCAATCGCAGGAAGCGAAGCGCGGATCCGCTTCCTCATCCACCG ATCGCCCCCTCCTTCATCCTCCGGTAGCAGTCATGGCGTCGTCGGCGCTAATCTGCGACA CCGAGCAGTGGAAGGGCCTCCAGGCGCACGTCGGGGCGATTCAGAAGACGCACCTGCGCG ATCTGATGGATGATGCCGAGCGCTGCAAGGCAATGACAGCTGAGTATGAAGGCATATTTC TGGATTACTCGAGGCAGCGTGCAACTGGCGAGACCATGGAGAAGCTGTTTAAATTGGCAG AGGCGGCAAAGCTCAAGGAGAAGATTGAGAAGATGTTTAGTGGTGACAAGATAAATAGCA CAGAGAACAGATCTGTGCTTCATGTAGCTCTAAGGGCTCCAAGAGACGAAGTAATAAAAA GTGATGGGGTCAATGTGGTTCCCGAAGTTTGGGGTGTAAAAGATAAAATCAAGCAGTTTT CAGAAACTTTTAGGAGTGGATCATGGGTTGGGGCAACTGGTAAAGCATTGACAAATGTTG TGTCAGTTGGAATAGGTGGTAGCTTTCTTGGTCCTCTGTTCGTGCATGCTGCCCTCCAGA CAGATCCAGAAGCTGCAGAATCTGCCAAAGGGCGACAGTTAAGATTCCTTGCAAATGTTG ACCCTGTTGATGTTGCACGAAGCATCAAAGATTTAGATCCTGAAACAACACTTGTTGTGG TTGTCTCAAAGACCTTCACAACAGCTGAAACAATGTTAAATGCTCGAACTCTCAAGGAGT GGATTGTCTCTTCTCTTGGACCTGATGCTGTTGCGAAACATATGATTGCTGTCAGTACCA ATCTTGAGCTTGTGGAGAAGTTTGGAATTGACCCTAAAAATGCTTTTGCATTTTGGGACT GGGTTGGTGGTCGCTATAGTGTTTGCAGTGCTGTTGGTGTCCTGCCCTTATCTCTTCAAT ATGGTTTTCCGATTGTTCAGAAATTTTTGGAGGGTGCAGCCAGCATCGACAAACACTTCC GTTCATCTTCATTTGAGAAAAACATACCTGTACTCCTTGGTTTGCTGAGTGTGTGGAATG TTTCCTTTCTTGGATATCCAGCTAGAGCAATATTGCCCTATTCCCAGGCACTTGAGAAAT TTGCACCACATATTCAGCAGCTTAGCATGGAGAGTAATGGAAAGGGTGTCTCTATTGATG GCGTTCAATTGTCCTTTGAGACTGGTGAAATTGATTTTGGTGAACCTGGAACCAATGGGC AACACAGCTTCTATCAATTAATCCATCAGGGAAGAGTTATTCCTTGTGATTTTATCGGCG TCGTGAAAAGCCAGCAACCCGTTTACTTGAAAGGGGAAATTGTGAGCAATCATGACGAAT TGATGTCCAATTTCTTTGCTCAGCCTGATGCACTTGCTTATGGAAAGACCCCTGAACAAC TGCACAGCGAGAAAGTACCTGAACATCTTATCTCTCATAAGACTTTTCAGGGCAACCGAC CATCACTTAGTTTATTGCTGCCCTCATTATCTGCTTATGAGATTGGACAGCTTTTATCCA TCTACGAGCACCGGATTGCAGTTCAGGGTTTCCTATGGGGAATAAACTCATTTGACCAGT GGGGAGTGGAACTGGGAAAGTCTCTGGCTTCTCAAGTGAGAAAATCTCTGCATGCATCCC GCATGGAAGGAAAGCCTGTCCAGGGGTTCAACAGCAGCACTGCAAGTTTGCTGACACGAT ATCTCGCTGTTGAGCCATCCACTCCTTACAACACTACAACAATGCCGAAAGTTTAATATG ATGTGTTTGGCACGCTATTTTCTTTGAGTTAAACAAGGTTGAGCCGGCATATTCTGTAAT AAGTTTATTTATGTTCCTTTTGAAGTTGTTACAGGCTTACAGCCCGTTTTACAGTACCAT AGTTTTGTTGTTTTTTTCTTTTTATTTACTCCGACTTCCAGGAGAACAAAATGGAAAAGA AAAAGGAAAGGAAACTATTTTGC