Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0254600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:7996917:8004842:-1 gene:Os06g0254600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caleosin related family protein. (Os06t0254600-01)
Sequence

ATGAGGGCTCAACGACCATCGTTGGCAGCTGCTGGCAATCCGGTACTTGCTCTTCTGTTT
CTATGGGTTCTTAGCTGGGGACATGTAACGGCGGAAATTGATATCGCCAACATGACGGCG
CTACAGAAACATGTTTCGTTCTTCGACCGGAACAAGGATGGCATTATTACTCCGTCGGAG
ACCATTGAAGGGGTTGTTGCAATCGGTTGTGACTTCGCATTTGCTAGAGACCTTGCCGCC
AGTGTGCATGCTGGTCTTGGTCCTAAAACAAGCCCCAAGGATGCACCATTACCTCACTTA
TCGATATACATAAACAACATCTATAGAGGAATGCACAGGAGTGACACAGGTGCACTAGAT
GCTAAAGGAAGGTTTGTTCCTGCAAAGTTTGAGGAAATATTCTCGAAACACGCAAAAAAT
AGACCAGATGCATTGACATCCTTGGAGGTCAAAGAGATGATTCTAGCAAATCGAGATCCA
AATGACCCACAATCATGGGGTGCAGCTATAAAGGAGTGGGGGCTAATTTATGGTCTTGCG
AGTGATAAGAACGGATATTTTCACAAGGATAGTGTGAGAGGTATATACGATGGTAGTGTG
TTCGTCAAGTTGGAGAAAGAGAGGGAATCTTCACAAAGTACAGTTTGCCGGAGCTTATCA
TTTCGGAGTTCTGTATAA

Peptide Sequence

PEP ID

Os06t0254600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:7996917:8004842:-1 gene:Os06g0254600 transcript:Os06t0254600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caleosin related family protein. (Os06t0254600-01)
Sequence

MRAQRPSLAAAGNPVLALLFLWVLSWGHVTAEIDIANMTALQKHVSFFDRNKDGIITPSE
TIEGVVAIGCDFAFARDLAASVHAGLGPKTSPKDAPLPHLSIYINNIYRGMHRSDTGALD
AKGRFVPAKFEEIFSKHAKNRPDALTSLEVKEMILANRDPNDPQSWGAAIKEWGLIYGLA
SDKNGYFHKDSVRGIYDGSVFVKLEKERESSQSTVCRSLSFRSSV

Transcript Sequence

Transcript ID

Os06t0254600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7996917:8004842:-1 gene:Os06g0254600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caleosin related family protein. (Os06t0254600-01)
Sequence

GAGAGCAATTCTGCGAGACGATGAGGGCTCAACGACCATCGTTGGCAGCTGCTGGCAATC
CGGTACTTGCTCTTCTGTTTCTATGGGTTCTTAGCTGGGGACATGTAACGGCGGAAATTG
ATATCGCCAACATGACGGCGCTACAGAAACATGTTTCGTTCTTCGACCGGAACAAGGATG
GCATTATTACTCCGTCGGAGACCATTGAAGGGGTTGTTGCAATCGGTTGTGACTTCGCAT
TTGCTAGAGACCTTGCCGCCAGTGTGCATGCTGGTCTTGGTCCTAAAACAAGCCCCAAGG
ATGCACCATTACCTCACTTATCGATATACATAAACAACATCTATAGAGGAATGCACAGGA
GTGACACAGGTGCACTAGATGCTAAAGGAAGGTTTGTTCCTGCAAAGTTTGAGGAAATAT
TCTCGAAACACGCAAAAAATAGACCAGATGCATTGACATCCTTGGAGGTCAAAGAGATGA
TTCTAGCAAATCGAGATCCAAATGACCCACAATCATGGGGTGCAGCTATAAAGGAGTGGG
GGCTAATTTATGGTCTTGCGAGTGATAAGAACGGATATTTTCACAAGGATAGTGTGAGAG
GTATATACGATGGTAGTGTGTTCGTCAAGTTGGAGAAAGAGAGGGAATCTTCACAAAGTA
CAGTTTGCCGGAGCTTATCATTTCGGAGTTCTGTATAAAGTAATTGGGAAATGAAGTTAT
AATCACAAATACATTGTATTGCATCATAGGTATTGTTCGTGTACATGCAAAATGCCATAT
TTGGAGAAGCACTGGTATGGTAGTAGAGTTATGGTTGCATGACTTTAATCGTTATGATTC
AAATCTCGATTTATATGAACATTATGTATACATGGGTGCACTCTTAATAAGATTTGAGAA
AACTAATTTT