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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0254300-03
CDS Infomation

cds chromosome:IRGSP-1.0:6:7983989:7990817:-1 gene:Os06g0254300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF-hand calcium bining protein. (Os06t0254300-01);Caleosin related family protein. (Os06t0254300-02);Similar to EF-hand calcium bining protein. (Os06t0254300-03)
Sequence

ATGAGGGCCCAACGACCGTCGTCGGCAGCTGCTGGCAATCCGGTGCTTGCTCTTCTGTTT
CTATGGGTCCTTGGCTGGGGACATGTAACGGCGGAAATTGATATCGCCAACATGACGGCG
CTACATAAACATGTTTCGTTCTTCGACCGGAACAAGGATGGCATTATTACTCCGTCGGAG
ACCATTGAAGGGATTGTTGCAATCGGTTGTGACTATGCATTTGCTAGAGACTTTGCCGCC
CCTGTGCATGCTGGTCTTGGTCCTAAAACAAGCCCCAAGGACGCACCATTACCTCACTTG
TCGATATACATAAAGAACATCTATAAAGGAATGCACGGGAGTGACACAGGTGCACTAGAT
GCTAAAGGAAGGTTTGTTCCTGCAAAGTTTGAGGAAATTTTCTCGAAACACGCAAAAAAT
AGACCAGATGCATTAACATCCTTGGAGGTCAAAGAGATGATTCTAGCAAATCGAGATCCA
GATGACCCACAATCATGGGCTGCACCTATACAGGAGTGGGGGCTAATTTATGGTCTTGCA
AGTGATAAGAACGGATATTTTCACAAGGATAGTGTGAGAGGTATATATGATGGTAGTGTG
TTCGTCAAGTTGGAGGAAGAGAGGGCATCTTCACAAAGTACAGTTTGCCGGAGCCTATCA
TTTAGGAGTACTGTATAA

Peptide Sequence

PEP ID

Os06t0254300-03
PEP Infomation

pep chromosome:IRGSP-1.0:6:7983989:7990817:-1 gene:Os06g0254300 transcript:Os06t0254300-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF-hand calcium bining protein. (Os06t0254300-01);Caleosin related family protein. (Os06t0254300-02);Similar to EF-hand calcium bining protein. (Os06t0254300-03)
Sequence

MRAQRPSSAAAGNPVLALLFLWVLGWGHVTAEIDIANMTALHKHVSFFDRNKDGIITPSE
TIEGIVAIGCDYAFARDFAAPVHAGLGPKTSPKDAPLPHLSIYIKNIYKGMHGSDTGALD
AKGRFVPAKFEEIFSKHAKNRPDALTSLEVKEMILANRDPDDPQSWAAPIQEWGLIYGLA
SDKNGYFHKDSVRGIYDGSVFVKLEEERASSQSTVCRSLSFRSTV

Transcript Sequence

Transcript ID

Os06t0254300-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7983989:7990817:-1 gene:Os06g0254300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF-hand calcium bining protein. (Os06t0254300-01);Caleosin related family protein. (Os06t0254300-02);Similar to EF-hand calcium bining protein. (Os06t0254300-03)
Sequence

AATTCTGCGCGGCGATGAGGGCCCAACGACCGTCGTCGGCAGCTGCTGGCAATCCGGTGC
TTGCTCTTCTGTTTCTATGGGTCCTTGGCTGGGGACATGTAACGGCGGAAATTGATATCG
CCAACATGACGGCGCTACATAAACATGTTTCGTTCTTCGACCGGAACAAGGATGGCATTA
TTACTCCGTCGGAGACCATTGAAGGGATTGTTGCAATCGGTTGTGACTATGCATTTGCTA
GAGACTTTGCCGCCCCTGTGCATGCTGGTCTTGGTCCTAAAACAAGCCCCAAGGACGCAC
CATTACCTCACTTGTCGATATACATAAAGAACATCTATAAAGGAATGCACGGGAGTGACA
CAGGTGCACTAGATGCTAAAGGAAGGTTTGTTCCTGCAAAGTTTGAGGAAATTTTCTCGA
AACACGCAAAAAATAGACCAGATGCATTAACATCCTTGGAGGTCAAAGAGATGATTCTAG
CAAATCGAGATCCAGATGACCCACAATCATGGGCTGCACCTATACAGGAGTGGGGGCTAA
TTTATGGTCTTGCAAGTGATAAGAACGGATATTTTCACAAGGATAGTGTGAGAGGTATAT
ATGATGGTAGTGTGTTCGTCAAGTTGGAGGAAGAGAGGGCATCTTCACAAAGTACAGTTT
GCCGGAGCCTATCATTTAGGAGTACTGTATAAAGTAATTGGGAAATGAAGTTATCCCAAA
TACATTGTATTGCATCATAGGTATTGTTCGTGTACTTACAAAATGCCATATTTGGAGAAG
CACTGGTGTATGGTAGTGGAGTTATAGTTGCATGACTTTAATCATTATGATTTAAATCTT
GGTTTATATGAATATTATGTATATACGGATGCACTCTTAATAAGATTTG