Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0253600-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:7964478:7967674:-1 gene:Os06g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to secretory protein-like. (Os06t0253600-00)
Sequence

ATGTCGAAGCGTCTCGCGGCGGCGCTGCTCGTGCTGTGCGCCTGCGCCACGCGCGCGCGG
GGCGCCGACGACTACACGGCGTTCGTGTACGCCGGGTGCTCGCAGGCGCGCTACGACGCC
GGGACGCAGTACGCGGCGGACGTCGACACCGCGCTCTCGGCGCTCACCAACAGCGCGGGC
TACACCGCCTACGCCAACTACACCTCGCCGTCGGCCGCCTCCGGCACCGGCCTCGTCGGC
GTCTACCAGTGCCGCTCCGACCTCCCCGCCGCGATCTGCGGCGGCTGCGTCAGGTCGGCC
GCCACCAAGCTCGCGTCGCTCTGCAACTCCGCGGCCGGCGCCGGGGTGCAGCTGCGCGCG
TGCTTCGTCCGCTACGGGAACGACTCGTTCCTCGGGAGGCAGGACACCACGGTGCTGTTC
AAGAAGTGCGGCGGCGAGGGCGGCAGCGACACGGGCGTCGTCGCCATGCGCGACGCGGCG
CTCGGCGCGCTCGTGGCCGCCGCGGCGCCCGCCGGCGACGGCTCGTACCGCGCCGGCGCG
GCCGGGTACGTGCAGGCCATGTCGCAGTGCGTGGGCGACCTCGGCGCCAAGGCCTGCACC
GACTGCGTCTCCGCCGCGTCGTCGCAGCTCAAGGCCGGCTGCGGGTACGCCTCTGCCGGC
GAGGTGTACCTCGGCAAGTGCTACGCGCGCTTCTGGTCCAATGCCGGAACCGGGGACAAC
AACGGAGGCGGCATCAGCGGCGGCGGCGGCGGCATTGGCGGCGGCGGGAATGGCATCAGT
GGCGGCGGCGGCGCTGTGGGCGGAGGCAATGGATACGCATATGGATTTGTGCCGCACACG
TACAGTGACCACGATGAATCTGGGAAAACACTTGCAATCATCATCGGCCTCGTCGCGGCT
GTCGCCCTCGTCATCGTCTTCCTCTCCTTCGTCAGAAGAGCCGGCGGTGTCGGTGGTAAG
AATTTTGGGTTCAGAATTTGTTGA

Peptide Sequence

PEP ID

Os06t0253600-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:7964478:7967674:-1 gene:Os06g0253600 transcript:Os06t0253600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to secretory protein-like. (Os06t0253600-00)
Sequence

MSKRLAAALLVLCACATRARGADDYTAFVYAGCSQARYDAGTQYAADVDTALSALTNSAG
YTAYANYTSPSAASGTGLVGVYQCRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRA
CFVRYGNDSFLGRQDTTVLFKKCGGEGGSDTGVVAMRDAALGALVAAAAPAGDGSYRAGA
AGYVQAMSQCVGDLGAKACTDCVSAASSQLKAGCGYASAGEVYLGKCYARFWSNAGTGDN
NGGGISGGGGGIGGGGNGISGGGGAVGGGNGYAYGFVPHTYSDHDESGKTLAIIIGLVAA
VALVIVFLSFVRRAGGVGGKNFGFRIC

Transcript Sequence

Transcript ID

Os06t0253600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7964478:7967674:-1 gene:Os06g0253600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to secretory protein-like. (Os06t0253600-00)
Sequence

CAAGAAAAGCCCAGCCATGTCGAAGCGTCTCGCGGCGGCGCTGCTCGTGCTGTGCGCCTG
CGCCACGCGCGCGCGGGGCGCCGACGACTACACGGCGTTCGTGTACGCCGGGTGCTCGCA
GGCGCGCTACGACGCCGGGACGCAGTACGCGGCGGACGTCGACACCGCGCTCTCGGCGCT
CACCAACAGCGCGGGCTACACCGCCTACGCCAACTACACCTCGCCGTCGGCCGCCTCCGG
CACCGGCCTCGTCGGCGTCTACCAGTGCCGCTCCGACCTCCCCGCCGCGATCTGCGGCGG
CTGCGTCAGGTCGGCCGCCACCAAGCTCGCGTCGCTCTGCAACTCCGCGGCCGGCGCCGG
GGTGCAGCTGCGCGCGTGCTTCGTCCGCTACGGGAACGACTCGTTCCTCGGGAGGCAGGA
CACCACGGTGCTGTTCAAGAAGTGCGGCGGCGAGGGCGGCAGCGACACGGGCGTCGTCGC
CATGCGCGACGCGGCGCTCGGCGCGCTCGTGGCCGCCGCGGCGCCCGCCGGCGACGGCTC
GTACCGCGCCGGCGCGGCCGGGTACGTGCAGGCCATGTCGCAGTGCGTGGGCGACCTCGG
CGCCAAGGCCTGCACCGACTGCGTCTCCGCCGCGTCGTCGCAGCTCAAGGCCGGCTGCGG
GTACGCCTCTGCCGGCGAGGTGTACCTCGGCAAGTGCTACGCGCGCTTCTGGTCCAATGC
CGGAACCGGGGACAACAACGGAGGCGGCATCAGCGGCGGCGGCGGCGGCATTGGCGGCGG
CGGGAATGGCATCAGTGGCGGCGGCGGCGCTGTGGGCGGAGGCAATGGATACGCATATGG
ATTTGTGCCGCACACGTACAGTGACCACGATGAATCTGGGAAAACACTTGCAATCATCAT
CGGCCTCGTCGCGGCTGTCGCCCTCGTCATCGTCTTCCTCTCCTTCGTCAGAAGAGCCGG
CGGTGTCGGTGGTAAGAATTTTGGGTTCAGAATTTGTTGA