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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0253100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:7940956:7941680:-1 gene:Os06g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP16.0 description:Heat shock protein Hsp20 domain containing protein. (Os06t0253100-01)
Sequence

ATGGCGGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGGCGGCCCTTCCCG
CCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAGACGCCGACCTCC
CACGTGCTCAGGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAGGTGCAGGTGGAG
GACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCGGAGAAGGAGAGG
GAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCGGAGTTCGCGAGG
GAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGCGTCGACAACGGC
GTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGGACCAGGCCCATC
GCCGTCTCCAGCAAGCTCTGA

Peptide Sequence

PEP ID

Os06t0253100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:7940956:7941680:-1 gene:Os06g0253100 transcript:Os06t0253100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP16.0 description:Heat shock protein Hsp20 domain containing protein. (Os06t0253100-01)
Sequence

MADLFFGGPFRRILYGRPFPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVE
DGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNG
VLTVVVPKEPAPARPRTRPIAVSSKL

Transcript Sequence

Transcript ID

Os06t0253100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7940956:7941680:-1 gene:Os06g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP16.0 description:Heat shock protein Hsp20 domain containing protein. (Os06t0253100-01)
Sequence

AGCTCACCAAAATCCCCAGTCCCGCGCAACCTTCAGCTCTCGGTCTGCGTTAGCTCCTGA
AGAATCGAAGCAATGGCGGACCTCTTCTTCGGTGGCCCCTTCCGGCGAATCCTCTACGGG
CGGCCCTTCCCGCCGGATTGGGCGTCGGCGTCGGCGACGGCGGCGATGGACTGGGTCGAG
ACGCCGACCTCCCACGTGCTCAGGATCAACGTCCCGGGACTGGGCAAGGACGACGTCAAG
GTGCAGGTGGAGGACGGCAACGTGCTCACCGTGAGGGGCGCGGCGCCGCACGCGGCGGCG
GAGAAGGAGAGGGAGAGGGAGAAGGATGTGGTGTGGCACGTGGCGGAGCGCGGGCGGCCG
GAGTTCGCGAGGGAGGTGGCGCTGCCGGCGGAGGTGAGGGTGGAGCAGATCAGGGCCAGC
GTCGACAACGGCGTGCTCACCGTCGTCGTGCCCAAGGAGCCCGCGCCGGCCCGGCCCAGG
ACCAGGCCCATCGCCGTCTCCAGCAAGCTCTGATCCTGATCAAGCCCGACCCTTTGTGCA
TTGTGCGCAAGTGTTTCTGTGTTTGTGAACTGTAGTCGATTATAGCAACCATCAGTCGAA
TGTTGTGAAGGGCGAATGTGTATTGGAAGTCCAAATCTTAATGTTGAAAATTTTGAAAAA
TTTTAGAGGTTTGAATTACTAGTATATCTATGTAATAATCTAATTAATAAAGGTGGGTCT
TCTGC