Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0251200-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:7841699:7844795:-1 gene:Os06g0251200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os06t0251200-01)
Sequence

ATGGAGACCCCGACAAATCTCACCAACACAATATCTGCAGTTCACCTGTTAAAAATCAAT
GGATATTCAGTAACCAGAGCACTTGGTTGTTCAGAGTATATCTCGTCGAGGAGATTGGCT
GCAGGTGGATATGATTGGGAAGTTCTTTACTATCCACGCTATTATGAGCATGGTGTGTAC
TGGATAGCACTTCGACTTATGTTTATGAGCAAGGAATGTAAGCATGAGGTGAAGGCAGCT
CTTAAATGTCAGTTAGTACATGAGGCACAAATTTATCTGCCATCCGGAAGTAAAAGTGTA
TCCTCTAAATATACAGGGCAACGAGATTGCGGGCCAGCGCTCCTGCTTGTAAAACAAGAT
GATTTGCCAGGATCCAATTATTTCATCGGGGATTCCTTTGTTGTGGAGTGCACCATCACT
GTGTTAAGAGAGCCACAGGAAGCTGTGACTAATGTTTCTCCAAATGTTTCCAATCCATGC
TGTGACTTGCAAATGCACCTTGGTGAACTCTTGCTGAGTGAAAAGGGGGCAGATGTCACG
TTTGTTGTTGCAGGTGAATCTTTCTTGGCACACAAGATCATCCTCGCTGCTAGATCCCCT
GTCTTCATGGCTGAGTTCTTTGGACCCATGAAGGAGAGTAGCTCACAGTGTGTGGAGATC
AAGGACATAGAGGCATCAGTCTTCAAGGCCATGCTTCATTTCATTTACACTGGTACATCA
CCGGAGCTTGATCAGCAGCATGTCGTCAGTGACTCGGAGCAGGACATCACAACAATGACA
CAGCATTTGCTTGTTGCTGCAGACAGGTATGGATTGGACAGGCTCAAACTGATCTGCCAA
GATAGGCTCCACGATGACATCAATGTGGAGACTGTTGCGACAACTTTGGCTTTCGCAGAG
CAGCATAGCTGTACACAGCTGAAGGACAGGTGCATCGAGTTCATCATCTCTTCTCGTGCA
AATCTTGATGCTGTTATGGCAACAGAGGGTTATAAGCTTGTGATAGCAAGCTGCCCGTCG
GTTCTAAGTACCCTTCTGAGGGCAGCGGTTGGGAGATAG

Peptide Sequence

PEP ID

Os06t0251200-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:7841699:7844795:-1 gene:Os06g0251200 transcript:Os06t0251200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os06t0251200-01)
Sequence

METPTNLTNTISAVHLLKINGYSVTRALGCSEYISSRRLAAGGYDWEVLYYPRYYEHGVY
WIALRLMFMSKECKHEVKAALKCQLVHEAQIYLPSGSKSVSSKYTGQRDCGPALLLVKQD
DLPGSNYFIGDSFVVECTITVLREPQEAVTNVSPNVSNPCCDLQMHLGELLLSEKGADVT
FVVAGESFLAHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTGTS
PELDQQHVVSDSEQDITTMTQHLLVAADRYGLDRLKLICQDRLHDDINVETVATTLAFAE
QHSCTQLKDRCIEFIISSRANLDAVMATEGYKLVIASCPSVLSTLLRAAVGR

Transcript Sequence

Transcript ID

Os06t0251200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7841699:7844795:-1 gene:Os06g0251200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os06t0251200-01)
Sequence

GCTCACTTTCTCCATCGTTGACGGGCTTCTCCTCCTCCTCCTCCTCTCCCCCCTCGTCGC
CGCCGTAGCCGGGGGGCGCCGCGGCGAAGCCGCCGATGCGGCCGGGTCCAGCCGCGGACG
CCGCCTTCGTCGATCCACGCCGCGCCGTTGGAAGAACATGCTATGTGTTTGAGCAAAGAT
TTTCTGAATTAGTCGTCTCCTGCAGCAGGCTATTAGGTTATTAGTGCAAGACAACTTCCT
AGTTCATTTTGTAAATTGTAACTCTTCGCACAAACAGTCAAATAGTCTCCACTCTCCAGT
GGCTATTGACCAATCACCATGGAGACCCCGACAAATCTCACCAACACAATATCTGCAGTT
CACCTGTTAAAAATCAATGGATATTCAGTAACCAGAGCACTTGGTTGTTCAGAGTATATC
TCGTCGAGGAGATTGGCTGCAGGTGGATATGATTGGGAAGTTCTTTACTATCCACGCTAT
TATGAGCATGGTGTGTACTGGATAGCACTTCGACTTATGTTTATGAGCAAGGAATGTAAG
CATGAGGTGAAGGCAGCTCTTAAATGTCAGTTAGTACATGAGGCACAAATTTATCTGCCA
TCCGGAAGTAAAAGTGTATCCTCTAAATATACAGGGCAACGAGATTGCGGGCCAGCGCTC
CTGCTTGTAAAACAAGATGATTTGCCAGGATCCAATTATTTCATCGGGGATTCCTTTGTT
GTGGAGTGCACCATCACTGTGTTAAGAGAGCCACAGGAAGCTGTGACTAATGTTTCTCCA
AATGTTTCCAATCCATGCTGTGACTTGCAAATGCACCTTGGTGAACTCTTGCTGAGTGAA
AAGGGGGCAGATGTCACGTTTGTTGTTGCAGGTGAATCTTTCTTGGCACACAAGATCATC
CTCGCTGCTAGATCCCCTGTCTTCATGGCTGAGTTCTTTGGACCCATGAAGGAGAGTAGC
TCACAGTGTGTGGAGATCAAGGACATAGAGGCATCAGTCTTCAAGGCCATGCTTCATTTC
ATTTACACTGGTACATCACCGGAGCTTGATCAGCAGCATGTCGTCAGTGACTCGGAGCAG
GACATCACAACAATGACACAGCATTTGCTTGTTGCTGCAGACAGGTATGGATTGGACAGG
CTCAAACTGATCTGCCAAGATAGGCTCCACGATGACATCAATGTGGAGACTGTTGCGACA
ACTTTGGCTTTCGCAGAGCAGCATAGCTGTACACAGCTGAAGGACAGGTGCATCGAGTTC
ATCATCTCTTCTCGTGCAAATCTTGATGCTGTTATGGCAACAGAGGGTTATAAGCTTGTG
ATAGCAAGCTGCCCGTCGGTTCTAAGTACCCTTCTGAGGGCAGCGGTTGGGAGATAGAAA
GTGCTAAATAGCTGAAGATTTACCACTACAAGGAAAGCAGGAATACTGGTTGGAAATGCA
ATTTCCAAGGGGCACTCCTGCAAATTATTAAAGGGAAGTACTGCTCACCAAAAGGCAGTC
TTTCGTAACCTATATTCAATAGGAAAAATGAGAAATTAATGGGAAAAATGTACAGCAATA
ATAAAATTCAAGTGACAGTATATACCATAGAAGTGCATTAAGGTCCCTGCAAAAACAAAA
GAAAAAGAAGTGCCTCAAGGAACTCCGGGAAAACAGAAGAAGAGGATGGTCCATGAGCAA
CCTATGATTTGAGAAACAAAACCAGTTAGTATGTTCTTATTTCTAGGGAACCATAATAGC
ATTTCTTTACTTACATAAGAATTGAGTTTGTGCATTAGGCTTGTTCACTGTGTACTCCAG
CCACTGTATCCGACTTCCTTGTTGTTGACAACATTTGTGACTACCTCATGAGTAATATCA
TGTACTTGCTGATGTGTGTACAGTGACTGTCTCCCATTGTTTAGGATGTTGCAGGATGGT
GCACATGTTGAATCAACCCGATCTCTATCT