Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0249500-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:7768090:7769421:-1 gene:Os06g0249500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0249500-00)
Sequence	ATGCAGGGTTGTGCCTCCGTCCGGCCCGACGTCGTCACCTACGGCATTCTCGTCAACGGC CTCTGCAAGGCCGGCCGTGTTGGGGACGCGCTCAGGGTGCTCGATGGAATGTCTCGCCAG GATTTAGATATCCGGCCAGATGTCGTGACGTTGAACACCGTTGTAGATGGTCTGTGCAAG AGCGGCCGGGTCCAGGAGGCTCTCGCGTTCGTGGAGCAGCGGATGAGTAGCGTGCATGGG TGTCCTCCTAATACTGTCACTTACAACTGCTTGATTGATGCATTCTGCCGCGTGGGGAAT ATTTCAATGGCCTATGAGTTGGTAGAGAAGATGGAGAATGAGGGTGTGCCACAAAACATT GTCACCCTCAACACGATTGTTGGTGGCTTGTGCCGGGCTGGGAGAACCGGAGCTGCACTG GAGTTCTTCAGGGAGAAAAGAACTGTGTGGCCAGAAGGCAAGGGCAATGCAGTGACCTAC AGCACTTTGGTTGGGGCTCTCCTCCACACCAACAATGTTGGTATGGCCATGGAATTGTTC CATGAGAAGATGAGTGAAGGGCATTCACCAGATGCGATCATGTATTTCACTATGATATCA GGATTGACACAAGCAGGCCGACTGGAGGATGCTTGCTCTATGGCTTCATCGATGAAGGAG GCAGGCTTTAAGCTGGACACAAAGGCATACAACATTTTGATTGCTGGATTTTGCAGGAAG AAGAGGTTGCATGAGGCTTATGAACTTCTTCAGGAAATGAAGGAGGTTGGTATTCGGCCA GATGTGTGCACCTATAATACTTTGTTGTCTGGTTCATGCAAGGCAGGGGATTTCGCGGCT GTGGATGAATTATTGGGGAAGATGATCGATGATGGTTGCCAGCCTTCTGTTATAACTTTT GGTACACTTGTACATGGGTATTGCAAAGTTGGCAAAATTGATGAGGCATTGAGAATTTTA AGATCTATGGATGAATCTGGTATTCATCCCAACAATGTGATATATAATACTCTCATTGAC TTCCTCTGCAAGAGAGGAGATGTTGATTTAGCCATTGAGCTGTTCGATGAGATGAAGGAG AAGAGTGTGCCAGCAAATGTAACGACCTTTAATGCTCTATTGAAGGGGCTTCGTGATAAG AACATGCCAGAAAAGGCTTTCGAACTTATGGACCAAATGAGGGAAGAGAGGTGCTTTCCT GATTATGTGACCGTGGATGTTCTCATGGAATGGTTACCTGTCATTGGTGAAACAGACCGA TTAAAGCGTTTCATGCAGCAAGGGGAGCATACTGCATCCAAAAGGATAGTTTCTGACAGA ACCTCAGCTTAG

Peptide Sequence

PEP ID	Os06t0249500-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:7768090:7769421:-1 gene:Os06g0249500 transcript:Os06t0249500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0249500-00)
Sequence	MQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNI VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF GTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKE KSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR LKRFMQQGEHTASKRIVSDRTSA

Transcript Sequence

Transcript ID	Os06t0249500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:7768090:7769421:-1 gene:Os06g0249500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0249500-00)
Sequence	ATGCAGGGTTGTGCCTCCGTCCGGCCCGACGTCGTCACCTACGGCATTCTCGTCAACGGC CTCTGCAAGGCCGGCCGTGTTGGGGACGCGCTCAGGGTGCTCGATGGAATGTCTCGCCAG GATTTAGATATCCGGCCAGATGTCGTGACGTTGAACACCGTTGTAGATGGTCTGTGCAAG AGCGGCCGGGTCCAGGAGGCTCTCGCGTTCGTGGAGCAGCGGATGAGTAGCGTGCATGGG TGTCCTCCTAATACTGTCACTTACAACTGCTTGATTGATGCATTCTGCCGCGTGGGGAAT ATTTCAATGGCCTATGAGTTGGTAGAGAAGATGGAGAATGAGGGTGTGCCACAAAACATT GTCACCCTCAACACGATTGTTGGTGGCTTGTGCCGGGCTGGGAGAACCGGAGCTGCACTG GAGTTCTTCAGGGAGAAAAGAACTGTGTGGCCAGAAGGCAAGGGCAATGCAGTGACCTAC AGCACTTTGGTTGGGGCTCTCCTCCACACCAACAATGTTGGTATGGCCATGGAATTGTTC CATGAGAAGATGAGTGAAGGGCATTCACCAGATGCGATCATGTATTTCACTATGATATCA GGATTGACACAAGCAGGCCGACTGGAGGATGCTTGCTCTATGGCTTCATCGATGAAGGAG GCAGGCTTTAAGCTGGACACAAAGGCATACAACATTTTGATTGCTGGATTTTGCAGGAAG AAGAGGTTGCATGAGGCTTATGAACTTCTTCAGGAAATGAAGGAGGTTGGTATTCGGCCA GATGTGTGCACCTATAATACTTTGTTGTCTGGTTCATGCAAGGCAGGGGATTTCGCGGCT GTGGATGAATTATTGGGGAAGATGATCGATGATGGTTGCCAGCCTTCTGTTATAACTTTT GGTACACTTGTACATGGGTATTGCAAAGTTGGCAAAATTGATGAGGCATTGAGAATTTTA AGATCTATGGATGAATCTGGTATTCATCCCAACAATGTGATATATAATACTCTCATTGAC TTCCTCTGCAAGAGAGGAGATGTTGATTTAGCCATTGAGCTGTTCGATGAGATGAAGGAG AAGAGTGTGCCAGCAAATGTAACGACCTTTAATGCTCTATTGAAGGGGCTTCGTGATAAG AACATGCCAGAAAAGGCTTTCGAACTTATGGACCAAATGAGGGAAGAGAGGTGCTTTCCT GATTATGTGACCGTGGATGTTCTCATGGAATGGTTACCTGTCATTGGTGAAACAGACCGA TTAAAGCGTTTCATGCAGCAAGGGGAGCATACTGCATCCAAAAGGATAGTTTCTGACAGA ACCTCAGCTTAG