Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0248500-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:7709145:7710744:1 gene:Os06g0248500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 39, U-box protein 39 description:U box domain containing protein. (Os06t0248500-00)
Sequence	ATGGTTTTGCCGATGTCTCGCGCGACGAGGGTGGCCGGGAGGCTGATGCCAGAGATATCG TTGCTGAGACGGGGGAGGAAGTCGGCGGCGAGAGGCGGCGACGATGCGGAGGTGGAGGTG TCGGTGCCGGCGAACTTCGTGTGCCCGATCTCGCTTGAGATGATGAGGGACCCGGTGACG GCGCCGACGGGGATCACGTACGATCGGGAGAGCGTGGAAGGGTGGCTGGCGAGGGGGCAC GACACGTGTCCGGTGACCGGCCGGCCGGTGAGGCTCGCCGACCTGGTGCCCAACCACGCG ACGCGGCGGATGATCCAGGACTGGTGCGTGGCGAACCGGGCGCGCGGGGTGGAGCGGGTG CCCACGCCCAGGGTGCCCGTCGGCGAGGACGACGCCGAGGAGGTGGTAGCCGGGGTGTCC GCCGCGGCGAGGCGGGGCGACGCGGCGGCGTGCGGCGCCGCGGCCGCAACGGCCAGGGCG CTCGGGAGGGAGAGCGAGCGGAACCGGCGGTGCCTCGCCGGCGCGGGCGCGGCGCACGCG CTGTCGTCCGCGTTCGGGCTGCTCGCCGGGGAGGAGCCCGTCGTCGAGGGCGCCGTCGCC GGCGCGCTCGGGGAGATCCTCGCCGCGCTCACGGTGTTCTTCCCGCTCGACGAGGAGTGC CGCAGCTGCATTGCCTCGCCGCCGTCGCTCAAGTCGCTCGCCTCGCTGCTCTCCCACGGC GGCGAGCTCGCCGCGCGGGTCAGCGCCGCCGTCGTGCTCCGCGAGCTCGCCTCCTCCGGC GACCGCCACGCCCTGGAGGCCATCGCGAGGGCCCACGGCATGTGCGACGCGCTCGTCGGC CTCGTCACGAGCCCCGTCTCCTCGCAGGCCACCAAGGCCGCCCTCGTCACGGCCTACTAC CTCGTCTCCTCCGGCGACCGCGCCGCCGCGCGCTTCGCGGAGCTCGGCGTGGTCCCCGCC GCCGTGGAGCTCCTCGTGGACGCCGACAAGGGGACGAGCGAGAAGGCCCTGGCCGTGCTC GACGCCGCCCTGTGCGCCGACGCCGGCGTCGAGTCCGCGCGCGCGCACGCGCTGACCGTC CCGGTGCTCGTCAAGAAGATGTTCCGGGTGTCCGACATGGCGACGGACTTCGCCGTGTCC GCGCTCTGGCGCCTCTGCCGCGCCGGCGCCGGCGCCGCGCCGTGCCGCGCCGAGGCGCTC CGCGTCGGCGCGTTCCAGAAGCTGCTGCTGCTGCTCCAGGTGGGCTGCGCCGGCGTCACC AAGGAGCGCGCCAGCGAGCTGCTCAAGATGCTCAACGGGTCGCGAGGCAGCGTCGAATGC ATCGAGACAGTGGATTTCAAGGGTCTCAAGAGGCCATTCTGA

Peptide Sequence

PEP ID	Os06t0248500-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:7709145:7710744:1 gene:Os06g0248500 transcript:Os06t0248500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 39, U-box protein 39 description:U box domain containing protein. (Os06t0248500-00)
Sequence	MVLPMSRATRVAGRLMPEISLLRRGRKSAARGGDDAEVEVSVPANFVCPISLEMMRDPVT APTGITYDRESVEGWLARGHDTCPVTGRPVRLADLVPNHATRRMIQDWCVANRARGVERV PTPRVPVGEDDAEEVVAGVSAAARRGDAAACGAAAATARALGRESERNRRCLAGAGAAHA LSSAFGLLAGEEPVVEGAVAGALGEILAALTVFFPLDEECRSCIASPPSLKSLASLLSHG GELAARVSAAVVLRELASSGDRHALEAIARAHGMCDALVGLVTSPVSSQATKAALVTAYY LVSSGDRAAARFAELGVVPAAVELLVDADKGTSEKALAVLDAALCADAGVESARAHALTV PVLVKKMFRVSDMATDFAVSALWRLCRAGAGAAPCRAEALRVGAFQKLLLLLQVGCAGVT KERASELLKMLNGSRGSVECIETVDFKGLKRPF

Transcript Sequence

Transcript ID	Os06t0248500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:7709145:7710744:1 gene:Os06g0248500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 39, U-box protein 39 description:U box domain containing protein. (Os06t0248500-00)
Sequence	ATGGTTTTGCCGATGTCTCGCGCGACGAGGGTGGCCGGGAGGCTGATGCCAGAGATATCG TTGCTGAGACGGGGGAGGAAGTCGGCGGCGAGAGGCGGCGACGATGCGGAGGTGGAGGTG TCGGTGCCGGCGAACTTCGTGTGCCCGATCTCGCTTGAGATGATGAGGGACCCGGTGACG GCGCCGACGGGGATCACGTACGATCGGGAGAGCGTGGAAGGGTGGCTGGCGAGGGGGCAC GACACGTGTCCGGTGACCGGCCGGCCGGTGAGGCTCGCCGACCTGGTGCCCAACCACGCG ACGCGGCGGATGATCCAGGACTGGTGCGTGGCGAACCGGGCGCGCGGGGTGGAGCGGGTG CCCACGCCCAGGGTGCCCGTCGGCGAGGACGACGCCGAGGAGGTGGTAGCCGGGGTGTCC GCCGCGGCGAGGCGGGGCGACGCGGCGGCGTGCGGCGCCGCGGCCGCAACGGCCAGGGCG CTCGGGAGGGAGAGCGAGCGGAACCGGCGGTGCCTCGCCGGCGCGGGCGCGGCGCACGCG CTGTCGTCCGCGTTCGGGCTGCTCGCCGGGGAGGAGCCCGTCGTCGAGGGCGCCGTCGCC GGCGCGCTCGGGGAGATCCTCGCCGCGCTCACGGTGTTCTTCCCGCTCGACGAGGAGTGC CGCAGCTGCATTGCCTCGCCGCCGTCGCTCAAGTCGCTCGCCTCGCTGCTCTCCCACGGC GGCGAGCTCGCCGCGCGGGTCAGCGCCGCCGTCGTGCTCCGCGAGCTCGCCTCCTCCGGC GACCGCCACGCCCTGGAGGCCATCGCGAGGGCCCACGGCATGTGCGACGCGCTCGTCGGC CTCGTCACGAGCCCCGTCTCCTCGCAGGCCACCAAGGCCGCCCTCGTCACGGCCTACTAC CTCGTCTCCTCCGGCGACCGCGCCGCCGCGCGCTTCGCGGAGCTCGGCGTGGTCCCCGCC GCCGTGGAGCTCCTCGTGGACGCCGACAAGGGGACGAGCGAGAAGGCCCTGGCCGTGCTC GACGCCGCCCTGTGCGCCGACGCCGGCGTCGAGTCCGCGCGCGCGCACGCGCTGACCGTC CCGGTGCTCGTCAAGAAGATGTTCCGGGTGTCCGACATGGCGACGGACTTCGCCGTGTCC GCGCTCTGGCGCCTCTGCCGCGCCGGCGCCGGCGCCGCGCCGTGCCGCGCCGAGGCGCTC CGCGTCGGCGCGTTCCAGAAGCTGCTGCTGCTGCTCCAGGTGGGCTGCGCCGGCGTCACC AAGGAGCGCGCCAGCGAGCTGCTCAAGATGCTCAACGGGTCGCGAGGCAGCGTCGAATGC ATCGAGACAGTGGATTTCAAGGGTCTCAAGAGGCCATTCTGAATTTCTGATCAAAGTTGA TTTTTGTAGATTTTTCTTTTTGAGAGTTAGATGTGTGGATAAAACATACAGGCATGGTAG TTTTAGGACACAGGGAATTTTTTTTGACACTGTAATTGAACATTCTTATACACACAGAAA TCAACAACACACAGGAGAAACAAAGATTTTTTTTCTTATTAATTCTTGCGACATCTTGGT GCTTATTTCATGATTTTGAGTATATGAATGTGAATTTGAT