Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0245900-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:7584780:7590605:1 gene:Os06g0245900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DP-LIKE 2 description:E2F Family domain containing protein. (Os06t0245900-01)
Sequence

ATGGCCGCCGCCGCCGATGCTCCCCCGCCTCCTCCGGAGGTCGCCCCGCCCGCGCCCGCG
CCCGCCCCCGCGCCGGCGCCATATCAGCCGCCGCGGCTGGCGGTGGCCGACGGAGCGGGA
GGTGGCGGCGGCGGCGGCGGGAAGCCGTGCAGGCACCACGCGTACAGCCGCAAGCAGAAG
TCGCTCGGCCTCCTCTGCACCAACTTCGTGGCGCTGTACGACCGGGAGGACGTGGAGTCG
GTGGGGCTGGACGACGCGGCGAGGCGGCTGGGCGTCGAGAGGCGCCGGATCTACGACATC
GTCAACGTGCTCGAGAGCATCGGGATGCTCGTGAGGAGGGCCAAGAATCGGTATACGTGG
ATCGGCTTCGGTGGAGTCCCTGCGGCGCTCGCGAAACTCAAGGAGATGTCACTGAGGGCG
GTGTCAAGCGTGGCGTCACCGTCGCTGGATGAAACATCTGCTGCTAATGTCTCGGATGAT
GAGGATGATGACAAGTTAGATGATGCTGAGGGCGATGCGGAGAGCGAGAAGCTCAGCCTC
AGCCAGTCCATTGACAATCCTTCTGATAAGCCTGATGCACCCCCTTGCAAGCTTCGATCC
GAGCATAGGAAGGAGAAGTCCCTTGGGCTGCTCACTCAGAATTTTGTCAAGCTCTTCCTC
ACCATGGAGATTGAGACGATCTCACTTGATGAAGCCGCAAAGCGGCTCCTTGGAGAGGGA
CATGCGGCGAACAATATGAGAACCAAAGTTCGGCGATTGTACGATATTGCCAATGTGCTG
TCTTCTTTGAATCTTATTGAGAAGACACAACAGGCGGACTCAAGAAAACCTGCATTCCGG
TGGCTGGGCCAGGCAAAACGGAATGAAGGCGTCACGGTTGCTTTACCCCCAACCAAGACG
TTGCCTAACAAGAGAGCATTTGGTACTGATCTGACTAACATTGACAATAAGAGGGGTAAG
TTGGACTCCACAATGGAGAACAGAGGCAAGCCCACGCAGGATGGTGGCAACCTATTCAAT
AATTTGCAGAGGCAATTAGGGCAAGAGAACAGGAGCGATTTTGTTTATGGCCCCTTCCAC
CCTGCTGTTGCAAGGAAACAAGAACATGGTAATCGCACAGTACAAGAGAAGGAGAGGAAG
AGCATTCAAGACTGGGAGAACCTTGCTTCTTCTTTCCGTCCGCAATATCAAAATCCAGGA
CTGAACGATCTTTTTGGCCACTACATGGAAGCATGGAGGTCATGGTACTCGGATCTCAGG
CGAGACAGAGCATCATAA

Peptide Sequence

PEP ID

Os06t0245900-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:7584780:7590605:1 gene:Os06g0245900 transcript:Os06t0245900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DP-LIKE 2 description:E2F Family domain containing protein. (Os06t0245900-01)
Sequence

MAAAADAPPPPPEVAPPAPAPAPAPAPYQPPRLAVADGAGGGGGGGGKPCRHHAYSRKQK
SLGLLCTNFVALYDREDVESVGLDDAARRLGVERRRIYDIVNVLESIGMLVRRAKNRYTW
IGFGGVPAALAKLKEMSLRAVSSVASPSLDETSAANVSDDEDDDKLDDAEGDAESEKLSL
SQSIDNPSDKPDAPPCKLRSEHRKEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEG
HAANNMRTKVRRLYDIANVLSSLNLIEKTQQADSRKPAFRWLGQAKRNEGVTVALPPTKT
LPNKRAFGTDLTNIDNKRGKLDSTMENRGKPTQDGGNLFNNLQRQLGQENRSDFVYGPFH
PAVARKQEHGNRTVQEKERKSIQDWENLASSFRPQYQNPGLNDLFGHYMEAWRSWYSDLR
RDRAS

Transcript Sequence

Transcript ID

Os06t0245900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7584780:7590605:1 gene:Os06g0245900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DP-LIKE 2 description:E2F Family domain containing protein. (Os06t0245900-01)
Sequence

AAATCTCTCCTCCCGCTCGCCGAAACCCTCGCCGTCGCCGCGCCATGGCCGCCGCCGCCG
ATGCTCCCCCGCCTCCTCCGGAGGTCGCCCCGCCCGCGCCCGCGCCCGCCCCCGCGCCGG
CGCCATATCAGCCGCCGCGGCTGGCGGTGGCCGACGGAGCGGGAGGTGGCGGCGGCGGCG
GCGGGAAGCCGTGCAGGCACCACGCGTACAGCCGCAAGCAGAAGTCGCTCGGCCTCCTCT
GCACCAACTTCGTGGCGCTGTACGACCGGGAGGACGTGGAGTCGGTGGGGCTGGACGACG
CGGCGAGGCGGCTGGGCGTCGAGAGGCGCCGGATCTACGACATCGTCAACGTGCTCGAGA
GCATCGGGATGCTCGTGAGGAGGGCCAAGAATCGGTATACGTGGATCGGCTTCGGTGGAG
TCCCTGCGGCGCTCGCGAAACTCAAGGAGATGTCACTGAGGGCGGTGTCAAGCGTGGCGT
CACCGTCGCTGGATGAAACATCTGCTGCTAATGTCTCGGATGATGAGGATGATGACAAGT
TAGATGATGCTGAGGGCGATGCGGAGAGCGAGAAGCTCAGCCTCAGCCAGTCCATTGACA
ATCCTTCTGATAAGCCTGATGCACCCCCTTGCAAGCTTCGATCCGAGCATAGGAAGGAGA
AGTCCCTTGGGCTGCTCACTCAGAATTTTGTCAAGCTCTTCCTCACCATGGAGATTGAGA
CGATCTCACTTGATGAAGCCGCAAAGCGGCTCCTTGGAGAGGGACATGCGGCGAACAATA
TGAGAACCAAAGTTCGGCGATTGTACGATATTGCCAATGTGCTGTCTTCTTTGAATCTTA
TTGAGAAGACACAACAGGCGGACTCAAGAAAACCTGCATTCCGGTGGCTGGGCCAGGCAA
AACGGAATGAAGGCGTCACGGTTGCTTTACCCCCAACCAAGACGTTGCCTAACAAGAGAG
CATTTGGTACTGATCTGACTAACATTGACAATAAGAGGGGTAAGTTGGACTCCACAATGG
AGAACAGAGGCAAGCCCACGCAGGATGGTGGCAACCTATTCAATAATTTGCAGAGGCAAT
TAGGGCAAGAGAACAGGAGCGATTTTGTTTATGGCCCCTTCCACCCTGCTGTTGCAAGGA
AACAAGAACATGGTAATCGCACAGTACAAGAGAAGGAGAGGAAGAGCATTCAAGACTGGG
AGAACCTTGCTTCTTCTTTCCGTCCGCAATATCAAAATCCAGGACTGAACGATCTTTTTG
GCCACTACATGGAAGCATGGAGGTCATGGTACTCGGATCTCAGGCGAGACAGAGCATCAT
AAAACCAGATTCAGGCCGGTCCGTTGTAAACAAAATTCTTGTAGGCAGATAAACTCATTT
GTTGATGCATGGTTAGGGATTTTTGAGTTATACAAGATGTCACAAAAACAAAGGCTAGTG
CTGGCCTTTGATTGATTGTATTTACTCAGTGCAAGAAATTGGAAAGTCGTTTCGTCAATA
ATACTAGGATACCTGATTGTCGATTTGTTT