Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0239700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:7260409:7263955:1 gene:Os06g0239700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0239700-01)
Sequence

CCCTGTACACCACCTGTTCGATCAATTGCGCCGCCGCCGCCGCCGCCGCCTATGAGCTTC
CTAGCCGGCCGCCTCGCCGCCAAGGAGGGCGCCTACTTCCTCCAGGAGTCCAAGCACGCC
GCCGGCCGCCTCGCGGAGAAGCTCCCCGCCTCCGCCCCCGCCCCCGCCCCCGCCCCCGGG
TCGACGTCGCCGTCGCCCGACGTGCTCCCGGAGATCCTCCGCCACGCCGTGCCCATCAAG
GCGACGCCGCCTCCGGGTGAGCCCTCGCTCTCCGCGTCCTCCCGCTGGGCCGTCCCGCGG
GGCGGCGCCGAGGCTGCCGGCTTGTCCCCCGACGCGCTCAACCCGCTCCGCTCCTACGTC
TCTCTCCCGCAGGCGACCTTCGGCCCCAAAAGATGGCAGCTTCCAAATGAGCAGCCAAAC
TACTCTTCCTCAACGGCCAATGAGCGACGGCGTGATAGGCACCCACCTCCCATGGACCCT
GAAAAGTTGAAGGCTGTAATCGCTGGATACTCGCAGATTGGAAAGGCATTTATTGCTGCA
ACTATATTGGTGTTTGGAGGATCAACGGCTGTCCTATTATACACAGCAGATAAGCTGCAG
TTGCATTCAGTAGATGATGTCAGAACTAAAGGAAGAGATGCTGTGCAACCACGAGCCGAC
ATGATCAAAGAACAAATAGCTCCATTGAGAAGCTGGGCTGAAGAGATGTCCCGAAAATGG
CATTTCGAAGGAGATAAAGATGCCAAGGAGAAGTCCATTATCAGAGAGCTTTCAAGAGCA
CTCGGCTCTAGGACGCCGCCAACTTGA

Peptide Sequence

PEP ID

Os06t0239700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:7260409:7263955:1 gene:Os06g0239700 transcript:Os06t0239700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0239700-01)
Sequence

PCTPPVRSIAPPPPPPPMSFLAGRLAAKEGAYFLQESKHAAGRLAEKLPASAPAPAPAPG
STSPSPDVLPEILRHAVPIKATPPPGEPSLSASSRWAVPRGGAEAAGLSPDALNPLRSYV
SLPQATFGPKRWQLPNEQPNYSSSTANERRRDRHPPPMDPEKLKAVIAGYSQIGKAFIAA
TILVFGGSTAVLLYTADKLQLHSVDDVRTKGRDAVQPRADMIKEQIAPLRSWAEEMSRKW
HFEGDKDAKEKSIIRELSRALGSRTPPT

Transcript Sequence

Transcript ID

Os06t0239700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7260409:7263955:1 gene:Os06g0239700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0239700-01)
Sequence

CTCCCTGTACACCACCTGTTCGATCAATTGCGCCGCCGCCGCCGCCGCCGCCTATGAGCT
TCCTAGCCGGCCGCCTCGCCGCCAAGGAGGGCGCCTACTTCCTCCAGGAGTCCAAGCACG
CCGCCGGCCGCCTCGCGGAGAAGCTCCCCGCCTCCGCCCCCGCCCCCGCCCCCGCCCCCG
GGTCGACGTCGCCGTCGCCCGACGTGCTCCCGGAGATCCTCCGCCACGCCGTGCCCATCA
AGGCGACGCCGCCTCCGGGTGAGCCCTCGCTCTCCGCGTCCTCCCGCTGGGCCGTCCCGC
GGGGCGGCGCCGAGGCTGCCGGCTTGTCCCCCGACGCGCTCAACCCGCTCCGCTCCTACG
TCTCTCTCCCGCAGGCGACCTTCGGCCCCAAAAGATGGCAGCTTCCAAATGAGCAGCCAA
ACTACTCTTCCTCAACGGCCAATGAGCGACGGCGTGATAGGCACCCACCTCCCATGGACC
CTGAAAAGTTGAAGGCTGTAATCGCTGGATACTCGCAGATTGGAAAGGCATTTATTGCTG
CAACTATATTGGTGTTTGGAGGATCAACGGCTGTCCTATTATACACAGCAGATAAGCTGC
AGTTGCATTCAGTAGATGATGTCAGAACTAAAGGAAGAGATGCTGTGCAACCACGAGCCG
ACATGATCAAAGAACAAATAGCTCCATTGAGAAGCTGGGCTGAAGAGATGTCCCGAAAAT
GGCATTTCGAAGGAGATAAAGATGCCAAGGAGAAGTCCATTATCAGAGAGCTTTCAAGAG
CACTCGGCTCTAGGACGCCGCCAACTTGATCAAACATCTTCCGCCGATAGTTGATGTTAC
CAAGTTTACCATCGAGTCCATCGCTTGTACGTTGTGTATATTATGTTTGTTATAAGCCTA
TAAGTAATGTAAAGTTCGATCAAATAAGAGAGTTTGTTACTACCCCTTCTGGTCTGCGTA
AAAGACCAGATCGAAAAGGCGGACTCTTGGATAAAAACATTGTGATTGTTAACGGTGTTA
GGTAAAATATAAAGAGAAGCTAGTGTGAGT