Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0238200-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:7186601:7188076:1 gene:Os06g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 19, U-box protein 19 description:Similar to ubiquitin-protein ligase. (Os06t0238200-00)
Sequence	ATGGCGGGCGCCGCCGCCGCCGCCGCCGCCACCCCGCCGGAATTCGTGTGCCCGATCTCC GGCGAGCTCATGGCCGACCCGGTGATCGTCCCCAGCGGCGAGACCTTCGAGCGCGGCTGC GTCGAGGCCTGCGTGGCGCTGGGCTTCACCCCGGCGGCGCTGCCACTGTCCGTGGACCTC GCCGCCTCGCCGCCACCGGCGCTCATCCCGAACGCCAACCTCAGGAAGGCCATCTCCTCC TACTGCGACCGCGTCGGCTTGCCGCGTCCGCTCGCCGTCTCGCCGGAGGAGGCGAGGGGC ATTGTCCGCCACCTCATGGCGATGCGGGAGCCTGGTCGCGCCGGGGGAGTCAACGGCGAG CGGTTCGAGTCGTCGTCGTCGTCCTCGCCGGAGTTCGCGGCGTTGGGGTTGACCTTGGAG GAGGCTGTTCTGGTGAGGCTGCTCGACGACGAGCCGAGCCGGCAGGAGGGCGCGCTGGAG GCGCTGAAGCAGACGCTGCGCGGCGGCGAGAACGGGGTGAGGCGCGCGCTCTGCACGCCG CGGCTGCTCGACGGGCTGCGCCGCCTGATGGGGTCCGGCCACGAGGGCGTCAGGGTCAGC GCCGCCGCGTGCGTGGTCAACCTCTCGCTGGAGCCGGCGAACCGGGTGCAGCTGGTGCGC GCGGAGCTCGTGCCGGTGCTCGTCGGGCTGCTCGCCGCGGCGTCCCCGGAGCTCCGCGAC CACGCCGCCGGCGCGGTGTACAGCCTCTCGATCGAGGAGAGGAACCGGATCCCGATCGGC GTGCTCGGCGCCGTCCCGCCGCTGCTGCGCCTCCTCGCGAGCGCCGCCGACGGCGACCGC GCGCGGCGCGACGCTGGCATGGCGCTGTACTACCTCTCCCTCGACGAGATGAACCGGTCG AGGCTCGCGAGGTCGGCCGGCGCGGTGGCGGCCCTCGTCGGCGCCGCGGGGGACGCCGCG CTGCGCCGCCCGGCGCTGATGGTCATGGCCAACCTCGCCGGCTGCGGCGAGGGGAGGGAG GCGCTCATCGACGGCGGCGCGGTGGCGGCGGTGGCGGGGCTCATGCGCCGCGCCACCGTG GCGCCGGGGTCCACGGAGGAGGAGTACTGCCTCTCGGCGCTGCACGGGATGAGCCGCGGC AACGTCCGGTTCGGCGGGCTGGCGCGCGCCGCGGGCGCCGGCGAGGTGCTCCGGCGCGTC GCGGAGGGCCCCGGCGGCGGGGTGCGGCGGGACGTGGCGTGGCGGACGCTGCGCGCCGTG GGCGGGGTGGCCGCCGCCGCCACCGGCGAGTCTCTGTACGGCGGCGAGGACGCCGCCGCC GCCGCGCCGTGGATGGACGACGTGAGCGTCATGTCGGAGGCCATGGCGATGCCGCAGTTC CCGAGACGGCTGGTGGAGCACGCGCACGCGCACGGGGCGCCGCCGCGGTCGAACACCACG GCGCTCGACAGGCTCAGGCAAGCGCCCAACGGCTGA

Peptide Sequence

PEP ID	Os06t0238200-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:7186601:7188076:1 gene:Os06g0238200 transcript:Os06t0238200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 19, U-box protein 19 description:Similar to ubiquitin-protein ligase. (Os06t0238200-00)
Sequence	MAGAAAAAAATPPEFVCPISGELMADPVIVPSGETFERGCVEACVALGFTPAALPLSVDL AASPPPALIPNANLRKAISSYCDRVGLPRPLAVSPEEARGIVRHLMAMREPGRAGGVNGE RFESSSSSSPEFAALGLTLEEAVLVRLLDDEPSRQEGALEALKQTLRGGENGVRRALCTP RLLDGLRRLMGSGHEGVRVSAAACVVNLSLEPANRVQLVRAELVPVLVGLLAAASPELRD HAAGAVYSLSIEERNRIPIGVLGAVPPLLRLLASAADGDRARRDAGMALYYLSLDEMNRS RLARSAGAVAALVGAAGDAALRRPALMVMANLAGCGEGREALIDGGAVAAVAGLMRRATV APGSTEEEYCLSALHGMSRGNVRFGGLARAAGAGEVLRRVAEGPGGGVRRDVAWRTLRAV GGVAAAATGESLYGGEDAAAAAPWMDDVSVMSEAMAMPQFPRRLVEHAHAHGAPPRSNTT ALDRLRQAPNG

Transcript Sequence

Transcript ID	Os06t0238200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:7186601:7188076:1 gene:Os06g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 19, U-box protein 19 description:Similar to ubiquitin-protein ligase. (Os06t0238200-00)
Sequence	ATGGCGGGCGCCGCCGCCGCCGCCGCCGCCACCCCGCCGGAATTCGTGTGCCCGATCTCC GGCGAGCTCATGGCCGACCCGGTGATCGTCCCCAGCGGCGAGACCTTCGAGCGCGGCTGC GTCGAGGCCTGCGTGGCGCTGGGCTTCACCCCGGCGGCGCTGCCACTGTCCGTGGACCTC GCCGCCTCGCCGCCACCGGCGCTCATCCCGAACGCCAACCTCAGGAAGGCCATCTCCTCC TACTGCGACCGCGTCGGCTTGCCGCGTCCGCTCGCCGTCTCGCCGGAGGAGGCGAGGGGC ATTGTCCGCCACCTCATGGCGATGCGGGAGCCTGGTCGCGCCGGGGGAGTCAACGGCGAG CGGTTCGAGTCGTCGTCGTCGTCCTCGCCGGAGTTCGCGGCGTTGGGGTTGACCTTGGAG GAGGCTGTTCTGGTGAGGCTGCTCGACGACGAGCCGAGCCGGCAGGAGGGCGCGCTGGAG GCGCTGAAGCAGACGCTGCGCGGCGGCGAGAACGGGGTGAGGCGCGCGCTCTGCACGCCG CGGCTGCTCGACGGGCTGCGCCGCCTGATGGGGTCCGGCCACGAGGGCGTCAGGGTCAGC GCCGCCGCGTGCGTGGTCAACCTCTCGCTGGAGCCGGCGAACCGGGTGCAGCTGGTGCGC GCGGAGCTCGTGCCGGTGCTCGTCGGGCTGCTCGCCGCGGCGTCCCCGGAGCTCCGCGAC CACGCCGCCGGCGCGGTGTACAGCCTCTCGATCGAGGAGAGGAACCGGATCCCGATCGGC GTGCTCGGCGCCGTCCCGCCGCTGCTGCGCCTCCTCGCGAGCGCCGCCGACGGCGACCGC GCGCGGCGCGACGCTGGCATGGCGCTGTACTACCTCTCCCTCGACGAGATGAACCGGTCG AGGCTCGCGAGGTCGGCCGGCGCGGTGGCGGCCCTCGTCGGCGCCGCGGGGGACGCCGCG CTGCGCCGCCCGGCGCTGATGGTCATGGCCAACCTCGCCGGCTGCGGCGAGGGGAGGGAG GCGCTCATCGACGGCGGCGCGGTGGCGGCGGTGGCGGGGCTCATGCGCCGCGCCACCGTG GCGCCGGGGTCCACGGAGGAGGAGTACTGCCTCTCGGCGCTGCACGGGATGAGCCGCGGC AACGTCCGGTTCGGCGGGCTGGCGCGCGCCGCGGGCGCCGGCGAGGTGCTCCGGCGCGTC GCGGAGGGCCCCGGCGGCGGGGTGCGGCGGGACGTGGCGTGGCGGACGCTGCGCGCCGTG GGCGGGGTGGCCGCCGCCGCCACCGGCGAGTCTCTGTACGGCGGCGAGGACGCCGCCGCC GCCGCGCCGTGGATGGACGACGTGAGCGTCATGTCGGAGGCCATGGCGATGCCGCAGTTC CCGAGACGGCTGGTGGAGCACGCGCACGCGCACGGGGCGCCGCCGCGGTCGAACACCACG GCGCTCGACAGGCTCAGGCAAGCGCCCAACGGCTGA