Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0238000-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:7181620:7183510:1 gene:Os06g0238000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 20, U-box protein 20 description:Armadillo-like helical domain containing protein. (Os06t0238000-00)
Sequence	ATGGCCACCGCCTGGCCACGGTGGCGGCCGTCCTCGCCGCCGATGCCGTCCTCGTCGTCG TCGTCGCCGTCGTCGTCGTTCACGGCGGACCCGCCGGCGGAGTTCCTCTGCCCGATCTCC GGGACGCTGATGGCGGACCCGGTGGTCGTCCCGCCGGGGCAGACGTTCGAGCGCGCCTGC ATCCAGGCGTGCGCCGCGCTCGCCTTCTCCCCGCCGGCCGTCGCCGCCGACCTCTCCTCC CTCCCGCCCTCCGCCTCCTCCCCTCTCGTCCTCGTCCCCAACGTCGCGCTCCGCACCGCC ATACTCAACTGGTGCGACCGCCTCTCCCTCCCCTACCCCGCCCCTCTCTCCCCCGACACC GCGCGCGACGTCGTCCGCCGTCTCATGCCCTCGCCACCGCCTCCCCCGCCGAGGTCGCAG GCGCCGCCGCCCCCGCCGCCGGCCTCCTCCGTCCGGACGAGGAGCTACTACAGCGACGAC CTCGTGCAGCAGCAGCAGGAGGCGAGGCGGGAGGGTGGGTCTACGGAGGAGAGGATCATG GCCATGCTCGGCGCTGGCCCCGCGGAGCAGGAGGCGGCGATGGCGTTGCTGCGGAAGATG GCGCGGGAGAACAGGGAGATGCGGAGGGAGCTCTGCACGCCGCGGCTCCTCGCCGCGCTC CGCCCGATGCTGCTGTCCGGGGACGCCGGGGTCCAGGTCAACGCGGCGGCGGCGCTGGTC AACCTGTCGCTGGAGGCGGAGAACAAGGTGCGGATCGTGCGGTCCGGGGCGGTGTCGCCG CTGGTGGAGGTGCTCCGCAGCGGCCACCCGGAGGCGCGGGATCACGCCGCGGGCGCCGTA TACAGCCTCGCCGTGGAGGACGAGAACCGCGCGGCCATCGGCGTGCTCGGCGCGATCCCG CCGCTCCTGGAGCTCTTCGCGTGCGCCGGCGCCGCCCACCTCGCCCGCCGCGAGGCCGGC ATGGCGCTGTACCACGTCTCCCTCTCCGGGATGAACCGGTCCAAGATCGCGCGCACGCCG GGGGTGGTGCGGACGCTGCTCGCCGCGGCGGAGGCGGCGAGGGACGACCGCGCCAACGAG GCCGACGCCGCCGCCCTCCGCAGGATCGCCGTGATGATCCTCGCGAACCTCGCCGGCTGC CCGGACGGGAGGACCGCGCTGATGGACGGCGGCGCGGTGGCCGCCGTGGTGAGGCTGATG AGCAGCGGCTCCGCCGCGCCGGGGAGCGCGGAGGAGGAGTACTGCATCTCGTCGCTGTAC GGGATGAGCCGGGGGAGCCTGAGGTTCCGAGGGCTCGCGCGCGCCGCCGGCGTCGAGGCC GCGCTCACGCCGGTGGCCGAGGGCGCCGGCGGCGTGGGCCGGGACATGGCGCGGCGGACG CTCCGGGCGATGCGCGGGGAGGACGACGAGGCGGCGGTCACGGCCACGGGGCTGCTCGGC CGGCAGTGGGACGACGGGAGCGTCGTGTCGGAGGGGCTCGTGTCGATCCGGCGGCCGCCG CCGCGCCGGAGCAGCTACGGCGCCGGGGCGTCCGGGTCAAACACCACGCAGTTCTGA

Peptide Sequence

PEP ID	Os06t0238000-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:7181620:7183510:1 gene:Os06g0238000 transcript:Os06t0238000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 20, U-box protein 20 description:Armadillo-like helical domain containing protein. (Os06t0238000-00)
Sequence	MATAWPRWRPSSPPMPSSSSSSPSSSFTADPPAEFLCPISGTLMADPVVVPPGQTFERAC IQACAALAFSPPAVAADLSSLPPSASSPLVLVPNVALRTAILNWCDRLSLPYPAPLSPDT ARDVVRRLMPSPPPPPPRSQAPPPPPPASSVRTRSYYSDDLVQQQQEARREGGSTEERIM AMLGAGPAEQEAAMALLRKMARENREMRRELCTPRLLAALRPMLLSGDAGVQVNAAAALV NLSLEAENKVRIVRSGAVSPLVEVLRSGHPEARDHAAGAVYSLAVEDENRAAIGVLGAIP PLLELFACAGAAHLARREAGMALYHVSLSGMNRSKIARTPGVVRTLLAAAEAARDDRANE ADAAALRRIAVMILANLAGCPDGRTALMDGGAVAAVVRLMSSGSAAPGSAEEEYCISSLY GMSRGSLRFRGLARAAGVEAALTPVAEGAGGVGRDMARRTLRAMRGEDDEAAVTATGLLG RQWDDGSVVSEGLVSIRRPPPRRSSYGAGASGSNTTQF

Transcript Sequence

Transcript ID	Os06t0238000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:7181620:7183510:1 gene:Os06g0238000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 20, U-box protein 20 description:Armadillo-like helical domain containing protein. (Os06t0238000-00)
Sequence	GTAGCCGTCGCTACAAACCACGGTGCGCAGCGCATCCAAGCAAACAAACCAATCACACGA GACGCAGCCGACGAACGCGTCCATGGCCACCGCCTGGCCACGGTGGCGGCCGTCCTCGCC GCCGATGCCGTCCTCGTCGTCGTCGTCGCCGTCGTCGTCGTTCACGGCGGACCCGCCGGC GGAGTTCCTCTGCCCGATCTCCGGGACGCTGATGGCGGACCCGGTGGTCGTCCCGCCGGG GCAGACGTTCGAGCGCGCCTGCATCCAGGCGTGCGCCGCGCTCGCCTTCTCCCCGCCGGC CGTCGCCGCCGACCTCTCCTCCCTCCCGCCCTCCGCCTCCTCCCCTCTCGTCCTCGTCCC CAACGTCGCGCTCCGCACCGCCATACTCAACTGGTGCGACCGCCTCTCCCTCCCCTACCC CGCCCCTCTCTCCCCCGACACCGCGCGCGACGTCGTCCGCCGTCTCATGCCCTCGCCACC GCCTCCCCCGCCGAGGTCGCAGGCGCCGCCGCCCCCGCCGCCGGCCTCCTCCGTCCGGAC GAGGAGCTACTACAGCGACGACCTCGTGCAGCAGCAGCAGGAGGCGAGGCGGGAGGGTGG GTCTACGGAGGAGAGGATCATGGCCATGCTCGGCGCTGGCCCCGCGGAGCAGGAGGCGGC GATGGCGTTGCTGCGGAAGATGGCGCGGGAGAACAGGGAGATGCGGAGGGAGCTCTGCAC GCCGCGGCTCCTCGCCGCGCTCCGCCCGATGCTGCTGTCCGGGGACGCCGGGGTCCAGGT CAACGCGGCGGCGGCGCTGGTCAACCTGTCGCTGGAGGCGGAGAACAAGGTGCGGATCGT GCGGTCCGGGGCGGTGTCGCCGCTGGTGGAGGTGCTCCGCAGCGGCCACCCGGAGGCGCG GGATCACGCCGCGGGCGCCGTATACAGCCTCGCCGTGGAGGACGAGAACCGCGCGGCCAT CGGCGTGCTCGGCGCGATCCCGCCGCTCCTGGAGCTCTTCGCGTGCGCCGGCGCCGCCCA CCTCGCCCGCCGCGAGGCCGGCATGGCGCTGTACCACGTCTCCCTCTCCGGGATGAACCG GTCCAAGATCGCGCGCACGCCGGGGGTGGTGCGGACGCTGCTCGCCGCGGCGGAGGCGGC GAGGGACGACCGCGCCAACGAGGCCGACGCCGCCGCCCTCCGCAGGATCGCCGTGATGAT CCTCGCGAACCTCGCCGGCTGCCCGGACGGGAGGACCGCGCTGATGGACGGCGGCGCGGT GGCCGCCGTGGTGAGGCTGATGAGCAGCGGCTCCGCCGCGCCGGGGAGCGCGGAGGAGGA GTACTGCATCTCGTCGCTGTACGGGATGAGCCGGGGGAGCCTGAGGTTCCGAGGGCTCGC GCGCGCCGCCGGCGTCGAGGCCGCGCTCACGCCGGTGGCCGAGGGCGCCGGCGGCGTGGG CCGGGACATGGCGCGGCGGACGCTCCGGGCGATGCGCGGGGAGGACGACGAGGCGGCGGT CACGGCCACGGGGCTGCTCGGCCGGCAGTGGGACGACGGGAGCGTCGTGTCGGAGGGGCT CGTGTCGATCCGGCGGCCGCCGCCGCGCCGGAGCAGCTACGGCGCCGGGGCGTCCGGGTC AAACACCACGCAGTTCTGAAAAGTCAAAGTCTTCGCTTCTCTTCTTTTATTTCTTTCTTT TTTATTTCTTTTTTTTTTTGCTGGCTCTTGTTGAAGTATTTGGAACTGTATTTGCCATAG GCCCCAAAAAATCTGGTGGTTAACTACTTCTGATGAATGGTGTTGGTGTAATTGGATGGT GGATTCTTTTGTTGGAATTAAGCTGTAATTTAATTGGATCTTTGCACATGTTAAATTCTT TATGACTGAATAGTGGAACCTAGAACTGTGA