Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0237502-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:7148668:7155342:-1 gene:Os06g0237502 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2004. (Os06t0237502-00)
Sequence

ATGGAGTCCTCCCTCCTCCTCAAGCCCTTCGTCCTCCTCCCCTCCGCCCCGCGCCGCCGC
CACCATCACCACCTCTCCCTCCCCACGCCGCCGCATCGGCGCCTCCCCTCCTCCTCGTCC
TCGTCCCGCCACGCATCGCCCGCGTCCTACTCGTTCGCCGTGACCCGCGCCGCGCGCGAG
CTGTTCGACGGCAGCGCGGACAGGCCCCCCGGGGGGGTCGGCCGCGGGGGCGCGCGCCGG
AGGGAGTACCGCGTGGAGCAGGGGGAGGCACCACCGGCGGCGGCGGCGGCGGCGGCGGTC
AGGGGCGTCTCGCCGTACGTCGTCCCGGCCGCGGCGGTCCTCGCCCTGAGCTTTGTCATA
TGGAGGGTGGTTCAGAATTTGCTTCCCGGGAAGACAAAGGACCAGAGTTCTGGAGAATCT
ACCCCTTCTGGGATCATGTGGTCCTTTGCCGCTGGTTCCAATTTGTCAACATCTGCAAGC
TTTAATGCTGAAAAGGAATCAAGGAAGAATTTAAATAAGTTCTATAAGGAAATCAGGACT
CTGAAAAATGTTAACATGGCAGGTCGTCAATTTGGGGATGAGGGTCTGTTTTTTCTAGCA
GAAAGCTTAGCCTATAACAAGAGTGCAGAAGAGGTAGACTTTTCTGGCAATGGGATAACA
GCTGTGGGGATAGAAGCCTTTGATGGCATTCTTCAGATAAATACAGCCTTAAAATCTCTC
AACTTATCTGGAAATGCCATTGGAGACGAAGGAGCTAAGTGTCTTTCAGATATATTGGTA
GAGAATGTAGGTATCCAGAAGCTCCTATTGAACAGTACAAATATTGGAGACGAGGGGGCA
AAAGCAATTTCGGATATGTTGAAAAAGAACAAGACGATACGTACTTTACAACTCAGCAAC
AACACAATAGAATACAGCGGTTTTGCAAGTATTGCAGAAGCACTCCTTGAGAATAATGTG
CTACGGAGCTTATTTGTCAATGGCAACTATGGTGGTCCTCTTGGTGCATCCAGCCTAGCA
AAAGGAATTCTAGGGAACAAAACTTTGAGGGAACTTCATTTGCATGGCAATGGTTTTGGG
AATGAGGGAGTACGTGCATTGATGTCAGCGTTGTCTGCTCACAAAGGGAAGATCACTGTT
TTGGATATTGGTAACAACAACATTACCTCTGAAGGTTCTCTTCATGTTGCTGAGTTCATC
AAAAGGACAAAGTCTTTACTATGGCTCAGTCTATACATGAACGATATAAGTGATGAGGGA
GCTGAAAAGGTTGCAGATGCTCTGAAACAGAATAAAACAATTTCTACTGTAGACTTGGGT
GGTAATAACATTCACTCTAAAGGGGTAAGTGCAATAGCTGAAACTCTGAAGGATAATTCA
GTGGTGACAACATTGGAGTTGAGCTATAATCCGATTGGGCCAGAGGGGGTAAAGGCTCTT
TGTGATGTTCTCAAGTTCAATGGGAAAATCCAAACCCTTAAACTTGGTTGGTGCCAGATA
GGTGTATCAGGTGCAGAATTTGTTGCTGATTGTTTGAAGTACAACACAACATTATCTACA
TTGGATTTGAGGGCAAATGGACTTGGAGATGATGGTGCTATCTGCTTGGCTCGAAGTTTC
AAGATCATCAATGAATCTTTGACTTCACTTGACCTGGGCTTTAATGAGATTAGAGATGAT
GGAGCATTTGCATTGGCACAAGCACTTAAAGCTAATGAAGATCTTGCAGTCACATCATTA
AATCTTGCAAACAACTTCTTCACTAAATTTGGACAGGTTGCTCTGTCTGAGGCACGGGAT
CATGTATATGAGATGAGCGAAAAGGAAATAGACATTTTCTTTTAG

Peptide Sequence

PEP ID

Os06t0237502-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:7148668:7155342:-1 gene:Os06g0237502 transcript:Os06t0237502-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2004. (Os06t0237502-00)
Sequence

MESSLLLKPFVLLPSAPRRRHHHHLSLPTPPHRRLPSSSSSSRHASPASYSFAVTRAARE
LFDGSADRPPGGVGRGGARRREYRVEQGEAPPAAAAAAAVRGVSPYVVPAAAVLALSFVI
WRVVQNLLPGKTKDQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRT
LKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSL
NLSGNAIGDEGAKCLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSN
NTIEYSGFASIAEALLENNVLRSLFVNGNYGGPLGASSLAKGILGNKTLRELHLHGNGFG
NEGVRALMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEG
AEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKAL
CDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAICLARSF
KIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEARD
HVYEMSEKEIDIFF

Transcript Sequence

Transcript ID

Os06t0237502-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:7148668:7155342:-1 gene:Os06g0237502 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2004. (Os06t0237502-00)
Sequence

CTCTCCGACTCTCCCCTTCCTCGTCTCCATCTCGACACCACCCCTCCCGCCTCCCATGGA
GTCCTCCCTCCTCCTCAAGCCCTTCGTCCTCCTCCCCTCCGCCCCGCGCCGCCGCCACCA
TCACCACCTCTCCCTCCCCACGCCGCCGCATCGGCGCCTCCCCTCCTCCTCGTCCTCGTC
CCGCCACGCATCGCCCGCGTCCTACTCGTTCGCCGTGACCCGCGCCGCGCGCGAGCTGTT
CGACGGCAGCGCGGACAGGCCCCCCGGGGGGGTCGGCCGCGGGGGCGCGCGCCGGAGGGA
GTACCGCGTGGAGCAGGGGGAGGCACCACCGGCGGCGGCGGCGGCGGCGGCGGTCAGGGG
CGTCTCGCCGTACGTCGTCCCGGCCGCGGCGGTCCTCGCCCTGAGCTTTGTCATATGGAG
GGTGGTTCAGAATTTGCTTCCCGGGAAGACAAAGGACCAGAGTTCTGGAGAATCTACCCC
TTCTGGGATCATGTGGTCCTTTGCCGCTGGTTCCAATTTGTCAACATCTGCAAGCTTTAA
TGCTGAAAAGGAATCAAGGAAGAATTTAAATAAGTTCTATAAGGAAATCAGGACTCTGAA
AAATGTTAACATGGCAGGTCGTCAATTTGGGGATGAGGGTCTGTTTTTTCTAGCAGAAAG
CTTAGCCTATAACAAGAGTGCAGAAGAGGTAGACTTTTCTGGCAATGGGATAACAGCTGT
GGGGATAGAAGCCTTTGATGGCATTCTTCAGATAAATACAGCCTTAAAATCTCTCAACTT
ATCTGGAAATGCCATTGGAGACGAAGGAGCTAAGTGTCTTTCAGATATATTGGTAGAGAA
TGTAGGTATCCAGAAGCTCCTATTGAACAGTACAAATATTGGAGACGAGGGGGCAAAAGC
AATTTCGGATATGTTGAAAAAGAACAAGACGATACGTACTTTACAACTCAGCAACAACAC
AATAGAATACAGCGGTTTTGCAAGTATTGCAGAAGCACTCCTTGAGAATAATGTGCTACG
GAGCTTATTTGTCAATGGCAACTATGGTGGTCCTCTTGGTGCATCCAGCCTAGCAAAAGG
AATTCTAGGGAACAAAACTTTGAGGGAACTTCATTTGCATGGCAATGGTTTTGGGAATGA
GGGAGTACGTGCATTGATGTCAGCGTTGTCTGCTCACAAAGGGAAGATCACTGTTTTGGA
TATTGGTAACAACAACATTACCTCTGAAGGTTCTCTTCATGTTGCTGAGTTCATCAAAAG
GACAAAGTCTTTACTATGGCTCAGTCTATACATGAACGATATAAGTGATGAGGGAGCTGA
AAAGGTTGCAGATGCTCTGAAACAGAATAAAACAATTTCTACTGTAGACTTGGGTGGTAA
TAACATTCACTCTAAAGGGGTAAGTGCAATAGCTGAAACTCTGAAGGATAATTCAGTGGT
GACAACATTGGAGTTGAGCTATAATCCGATTGGGCCAGAGGGGGTAAAGGCTCTTTGTGA
TGTTCTCAAGTTCAATGGGAAAATCCAAACCCTTAAACTTGGTTGGTGCCAGATAGGTGT
ATCAGGTGCAGAATTTGTTGCTGATTGTTTGAAGTACAACACAACATTATCTACATTGGA
TTTGAGGGCAAATGGACTTGGAGATGATGGTGCTATCTGCTTGGCTCGAAGTTTCAAGAT
CATCAATGAATCTTTGACTTCACTTGACCTGGGCTTTAATGAGATTAGAGATGATGGAGC
ATTTGCATTGGCACAAGCACTTAAAGCTAATGAAGATCTTGCAGTCACATCATTAAATCT
TGCAAACAACTTCTTCACTAAATTTGGACAGGTTGCTCTGTCTGAGGCACGGGATCATGT
ATATGAGATGAGCGAAAAGGAAATAGACATTTTCTTTTAGGTGTTCTTGTTTATTTTTGC
AAAGTAGCTTCGAAAAAATGGCCTAAACCATGACTTCTGCTTGGAAGGGATACTTTCTGC
ATAATTAGCCACACAATCATGGTTGTTTTGGCACTACTTGAAGAAACGAAAGAAGAACAT
GGGGAAGAGCAATAGAGCATGATTTATGCTTGTCATAGAAAATTTTGGTAAACTAGTTAA
CTCTGTAGGTTAGTCATTGAACTGTCCATATGCATTTTTTCTGGAAGCATTGATCTCAAA
TTGATCATTCATATTGGTTGAAATAGACCATAT