Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0237300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:7133968:7140003:-1 gene:Os06g0237300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LIM domain protein WLIM-1. (Os06t0237300-01)
Sequence	ATGGCGGCGGCGGCGTGGGGCGGCACGACGCAGAAGTGCGACTCGTGCGGGAGGACGGTC TACCCCGTCGAGGAGCTCGCCGCCGACGGCCGCGTCTACCACCGCCCGTGCTTCCGCTGC ACCCACTGCAAGGCCACCCTCCAGTTTAGTAACTATTCTTCTGTCGAAGGTGTCCTATAT TGCAAACCTCACTATGACCAGATATTGAAATCAACCGGCAGTTTGGAGAAAAGTTTTGAA GGGACATCAAAATCAGCTAAAGCAGAAAAATCGAATGGAAACAAGGGGCAACCGAACAGA TTCTCTAGCATGTTTGTTGGCACACAAGACAAGTGCGTAGTTTGTAACAAGACTGTGTAC CCTCTTGAAAAGGTTAATCTTAACGGGAGCTCATATCATAAATCATGCTTCCGTTGCACC CATGGAGGCTGTACTCTTAGCCCATCCAACAATGTCACACATGAAGGCAAACTTTATTGC AAGACCCATCACTCTCAATTATTTATGGTTAAGGGAAACTTCAGCAATTTTGAGGATAGT ACTCCAAATGCAAAAGTGGATATCGAGAAGCAACCAGAACATGAAGATGCTACCAAGAAT CCAGGAGGCCCAGGTCAAGGTGATGGGCTCACTGAGAAACCTTTAGAAAGTGAACTCACT CCTGAGAAACCGTCACAAGACGATATTGTGGCTGAAAAGCAATCACAAAGTAGCGTTGAT GTCCCAAAACAATCAGAAAGCAGCACAACAGTTCAGAGGTCAGAAGAAGGGGAAAGGGTT ACCAAGGGTGAGTCAAATAGTCATGTAGTCAGCAAGAAGCCATTGGAAAGCAGTGTAGAA AAGCCATTCCAGAGCAGTGCAGTTAACTTACAGCCATCAGGAAGTAGTGCAGCCGTAAGA AAACCATGGCAGCGCAATCTTCCCACAGATAAGCCATTGCTGAGTAACACAACCACTGAA AAGTCAACTCCAAGCAGTGCTGCCATTGAGGAATCATTGCCAAGTAATGGGGTTGATGCA AAACAGCCAGAAAGCAGCACTGCCAGCACAGTGGTAAAAAGGCCATGGCAACGGAGGGTA GCTACGGAGAATCTACCGCAGAGCATTTCGCCATCAGATAAGCCATCATCAACCAGTGCA GATGATGTGAAGCCATCAGAAAACAGCAAATTGATCAGAAAACCATGGCAACGTGCTGTG GCTGCTGAGGCGCAGATACAGAACAGTGGACCAACTGAGAAGTCATCATTGACAAATGAT ACAAAGCCATCAGAAAGCACCACATCAATTAAAAGGCCATGGGAGCACAAAGTGGTCAAT GAGAAGCCACTGCAGAACAATATAGACACGGAGAAGCCACTGCAGAACAATACAGACACT GAGAAGTCATCTAGCAGTGCTATCGATGTGAAGCTGGCAGAAACCAGTACAACACCCACT GTGCCACAGGAACACAGTGGAATCACGGAGAAACCTTCACAGACCAGTGCAGATGATGTA AAGCCATCAGAGAGCACTGCAGCAGTGGTTAAAAAGCAATGGCAACGTAACATCGGATTC CAGAAACAGCCCCAGAGCAGTGTAACTGATGCAAAGACACCTGAAAGCAGGGGAATGGGC AAAAGATTGTGGCAGCGCAATGTTCCAACTGAAAAGCAATCGCAAAGCGGTGCGTCGGTT GTGACACCATCACAAGTTAGTGTGGCTAGCACCAACCCGCTCCAAAGCAGCGTGGTTGTG AAAAAGCCATGGCAAAGAAGCGTGTCTAGAGAAAAAGAGCCAGAGAAGGATATATCTAGC AACAAACCGTTACAAAACCGTGTACTTGCTGAAGAAGCAGAGAAAACCAATGTGACTGCT GATAACAAATCACAGATCATTCAAGATAAAAAGAACAATGGTGCTACCACAGAGAATTCA TCACAAATAAGTGAAAGTGCCAAAAAACTACCACTTACTGCAAATAAATCGCAAGCTGAT ACTTCCACAGAAAAATTGTCAGAAAGTGACATACTTGCTGTAGCATCATCTCAGATCACT GAACCATCTAAGAAGCCATCAGAAAACACTGCTGAAAATGAGAAGCCATCACAGACTGAT ATTGCTACTGACGAGCTACCCCTGACCCAAAGTGTAGAAGCCATGTCAGAACCATCTCCA AGTGATGCAGCTCATCAGGAAATCTCCGAGAGGGAGATACTGACAGATAAATTACCAGAA AGTACCATGGCTGTTGAGAAGCTATCTCAAACTGCTACTCTAACCGAAAAGCCATCTAAA GAAGATGCTGCAGAGAAGCTACCGCAAACCAATGAACCTTCTGAGCAGCCACACGAGAGT GAAGAGACTGCTGAGAAGCCACTTCAAAATGAAGCTAATGCTGAAAGCACAACAAAACAA AGTGATCTCAGTCTTGAGAAGCCACCTCAGGTTGATGCCAATGTTGGGAATCCTACCGAG CCTGAAAGTGATGCCACTTCTGGTGTGAACTCATCAGATGCTCAAATCAGGCCAACTGCT GAGCAGTTAGTAGGACCTCAAGGCATTGTATCTGCCGAGAAGACATCTGACCAGATATTA GAAGCTAACACCGATCCAGCTGCTGACCAGTCATCAGAGTCCCAAGATGTTGCACCTGCT AAAGTTGCAACGGAGCAACCATTAGAAAATCAAAAGGCTGCAGCTTCAGAGCAGCCATTG GAACCTCAACACGAAGCATATGAAGAGAATCCACAAGAGCATAATAGTGATGCAACTGCC AAGGAGTCATCAGAACCTGAAAGAGATACTGCTTCTGATCAGTTGGCTGAGCAGCCATCA GAATCTCGAACTGCAGGTGAGAAGGCAACACTGCGTGAAAGTGATGTGGTTACCGAGGAT CCAGCAGAACCTCAAATTGATGCAGCTGCTGAAAGGTCAGCTGAGGTGTTATCAGAATCT CAAACTGGAGTTGAGACACCAGTGCTGCATCAAAGTGATAGAACTAACGAGGTTCCATCA GAACCTCAAACTGATGAAGCTTCTGACAAGTCAACTGAGCAGCCATTGGAGCCTGAAAAT GATGCATCTGTCGAGGATGAGAAGCCACCGGAAATCGAAAGTGATGATGTGCATGATAAA CCATCAGAAAGCACCCCAGATACTGAAACCCTGCCTCATAACACTCCAAAGAGTAGCATA AGCATTAGCGAAGCTGCAGACGGCAACGTTTCTGAGGAGGCACCACCTCAGAGCAGTGCA TCCATAGAAACGCCATCAGAAAGTGCCATAGCTGTCGAGGAACCAAAACACGACGACGAG GCCAGCATAAAGCCATCCGAAGACAGCAGTGCTCTTGAGGAGCCGCCGCAGGACGATAGC GCCAGCGTGGAGCCATCAGAGAACACTATAACTCTTGAGAAGGCATCAGAGGAAGATGAG GGAAGTGTAAAGCCATCAGAAGGCAATGATGCTCTTGAGAAAACATTGGAGGAGGATGAG GCGAGTGCCAAGCTACCAGAAGACAGTACGACCTTTGAGAAGCCATCGGAGAAAGATGAT GCTGGCACCAAGCAGACAGAGGACCCTGTAACTCTTGAGAAGGAACCAGAGGAAGACAAG GGAAGTGTGGAGCCAACACAGGACAATGCTGGTCTTGAGAAACCGTTGGAGGAAGACGAG GCGAGTGCGAAGCCATCAGAGGACAGTGTGGTTCTTGATAAGCCATCAGTGGAAGATGAT GACAGCGCCAAGCCATCAGAGGATAGCATGGACCTTGAAAAGCCAGAGGCTCACAAACCA TCAGAGGAAGAAGATGGCGCGACCAAGTCATCACCGGAGGATGCTGCCGTTGAGGAGGCG CCATTGCAAGGTGACACAGAAACAGCCACTGACAAACCCTCACTAGAAGCAGACACCACA GAAACTGCCTGA

Peptide Sequence

PEP ID	Os06t0237300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:7133968:7140003:-1 gene:Os06g0237300 transcript:Os06t0237300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LIM domain protein WLIM-1. (Os06t0237300-01)
Sequence	MAAAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLY CKPHYDQILKSTGSLEKSFEGTSKSAKAEKSNGNKGQPNRFSSMFVGTQDKCVVCNKTVY PLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVKGNFSNFEDS TPNAKVDIEKQPEHEDATKNPGGPGQGDGLTEKPLESELTPEKPSQDDIVAEKQSQSSVD VPKQSESSTTVQRSEEGERVTKGESNSHVVSKKPLESSVEKPFQSSAVNLQPSGSSAAVR KPWQRNLPTDKPLLSNTTTEKSTPSSAAIEESLPSNGVDAKQPESSTASTVVKRPWQRRV ATENLPQSISPSDKPSSTSADDVKPSENSKLIRKPWQRAVAAEAQIQNSGPTEKSSLTND TKPSESTTSIKRPWEHKVVNEKPLQNNIDTEKPLQNNTDTEKSSSSAIDVKLAETSTTPT VPQEHSGITEKPSQTSADDVKPSESTAAVVKKQWQRNIGFQKQPQSSVTDAKTPESRGMG KRLWQRNVPTEKQSQSGASVVTPSQVSVASTNPLQSSVVVKKPWQRSVSREKEPEKDISS NKPLQNRVLAEEAEKTNVTADNKSQIIQDKKNNGATTENSSQISESAKKLPLTANKSQAD TSTEKLSESDILAVASSQITEPSKKPSENTAENEKPSQTDIATDELPLTQSVEAMSEPSP SDAAHQEISEREILTDKLPESTMAVEKLSQTATLTEKPSKEDAAEKLPQTNEPSEQPHES EETAEKPLQNEANAESTTKQSDLSLEKPPQVDANVGNPTEPESDATSGVNSSDAQIRPTA EQLVGPQGIVSAEKTSDQILEANTDPAADQSSESQDVAPAKVATEQPLENQKAAASEQPL EPQHEAYEENPQEHNSDATAKESSEPERDTASDQLAEQPSESRTAGEKATLRESDVVTED PAEPQIDAAAERSAEVLSESQTGVETPVLHQSDRTNEVPSEPQTDEASDKSTEQPLEPEN DASVEDEKPPEIESDDVHDKPSESTPDTETLPHNTPKSSISISEAADGNVSEEAPPQSSA SIETPSESAIAVEEPKHDDEASIKPSEDSSALEEPPQDDSASVEPSENTITLEKASEEDE GSVKPSEGNDALEKTLEEDEASAKLPEDSTTFEKPSEKDDAGTKQTEDPVTLEKEPEEDK GSVEPTQDNAGLEKPLEEDEASAKPSEDSVVLDKPSVEDDDSAKPSEDSMDLEKPEAHKP SEEEDGATKSSPEDAAVEEAPLQGDTETATDKPSLEADTTETA

Transcript Sequence

Transcript ID	Os06t0237300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:7133968:7140003:-1 gene:Os06g0237300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LIM domain protein WLIM-1. (Os06t0237300-01)
Sequence	GCTGCCGTTCCCCGTTATTCGCCAACGCTTCCCTCCACCCGCCCCCTCCCCAAGCTGAGC TGTGCTGCCGCTGCTTTCGCCTTCACTAATCATCATCGCCTCCTCCTCCTCCTTCTCCTC TTCCCCACCACCTTCCTCCCCACACACACACAACCTCGCGCGCGCGCGGCGAGAACGAGA AGCATCCAGGGCGGCGCGGAGGCGGAGGCGGAGGCGGAGGTGGAGGGGGGGGGGGGGGGG AAGCCGGGATGGCGGCGGCGGCGTGGGGCGGCACGACGCAGAAGTGCGACTCGTGCGGGA GGACGGTCTACCCCGTCGAGGAGCTCGCCGCCGACGGCCGCGTCTACCACCGCCCGTGCT TCCGCTGCACCCACTGCAAGGCCACCCTCCAGTTTAGTAACTATTCTTCTGTCGAAGGTG TCCTATATTGCAAACCTCACTATGACCAGATATTGAAATCAACCGGCAGTTTGGAGAAAA GTTTTGAAGGGACATCAAAATCAGCTAAAGCAGAAAAATCGAATGGAAACAAGGGGCAAC CGAACAGATTCTCTAGCATGTTTGTTGGCACACAAGACAAGTGCGTAGTTTGTAACAAGA CTGTGTACCCTCTTGAAAAGGTTAATCTTAACGGGAGCTCATATCATAAATCATGCTTCC GTTGCACCCATGGAGGCTGTACTCTTAGCCCATCCAACAATGTCACACATGAAGGCAAAC TTTATTGCAAGACCCATCACTCTCAATTATTTATGGTTAAGGGAAACTTCAGCAATTTTG AGGATAGTACTCCAAATGCAAAAGTGGATATCGAGAAGCAACCAGAACATGAAGATGCTA CCAAGAATCCAGGAGGCCCAGGTCAAGGTGATGGGCTCACTGAGAAACCTTTAGAAAGTG AACTCACTCCTGAGAAACCGTCACAAGACGATATTGTGGCTGAAAAGCAATCACAAAGTA GCGTTGATGTCCCAAAACAATCAGAAAGCAGCACAACAGTTCAGAGGTCAGAAGAAGGGG AAAGGGTTACCAAGGGTGAGTCAAATAGTCATGTAGTCAGCAAGAAGCCATTGGAAAGCA GTGTAGAAAAGCCATTCCAGAGCAGTGCAGTTAACTTACAGCCATCAGGAAGTAGTGCAG CCGTAAGAAAACCATGGCAGCGCAATCTTCCCACAGATAAGCCATTGCTGAGTAACACAA CCACTGAAAAGTCAACTCCAAGCAGTGCTGCCATTGAGGAATCATTGCCAAGTAATGGGG TTGATGCAAAACAGCCAGAAAGCAGCACTGCCAGCACAGTGGTAAAAAGGCCATGGCAAC GGAGGGTAGCTACGGAGAATCTACCGCAGAGCATTTCGCCATCAGATAAGCCATCATCAA CCAGTGCAGATGATGTGAAGCCATCAGAAAACAGCAAATTGATCAGAAAACCATGGCAAC GTGCTGTGGCTGCTGAGGCGCAGATACAGAACAGTGGACCAACTGAGAAGTCATCATTGA CAAATGATACAAAGCCATCAGAAAGCACCACATCAATTAAAAGGCCATGGGAGCACAAAG TGGTCAATGAGAAGCCACTGCAGAACAATATAGACACGGAGAAGCCACTGCAGAACAATA CAGACACTGAGAAGTCATCTAGCAGTGCTATCGATGTGAAGCTGGCAGAAACCAGTACAA CACCCACTGTGCCACAGGAACACAGTGGAATCACGGAGAAACCTTCACAGACCAGTGCAG ATGATGTAAAGCCATCAGAGAGCACTGCAGCAGTGGTTAAAAAGCAATGGCAACGTAACA TCGGATTCCAGAAACAGCCCCAGAGCAGTGTAACTGATGCAAAGACACCTGAAAGCAGGG GAATGGGCAAAAGATTGTGGCAGCGCAATGTTCCAACTGAAAAGCAATCGCAAAGCGGTG CGTCGGTTGTGACACCATCACAAGTTAGTGTGGCTAGCACCAACCCGCTCCAAAGCAGCG TGGTTGTGAAAAAGCCATGGCAAAGAAGCGTGTCTAGAGAAAAAGAGCCAGAGAAGGATA TATCTAGCAACAAACCGTTACAAAACCGTGTACTTGCTGAAGAAGCAGAGAAAACCAATG TGACTGCTGATAACAAATCACAGATCATTCAAGATAAAAAGAACAATGGTGCTACCACAG AGAATTCATCACAAATAAGTGAAAGTGCCAAAAAACTACCACTTACTGCAAATAAATCGC AAGCTGATACTTCCACAGAAAAATTGTCAGAAAGTGACATACTTGCTGTAGCATCATCTC AGATCACTGAACCATCTAAGAAGCCATCAGAAAACACTGCTGAAAATGAGAAGCCATCAC AGACTGATATTGCTACTGACGAGCTACCCCTGACCCAAAGTGTAGAAGCCATGTCAGAAC CATCTCCAAGTGATGCAGCTCATCAGGAAATCTCCGAGAGGGAGATACTGACAGATAAAT TACCAGAAAGTACCATGGCTGTTGAGAAGCTATCTCAAACTGCTACTCTAACCGAAAAGC CATCTAAAGAAGATGCTGCAGAGAAGCTACCGCAAACCAATGAACCTTCTGAGCAGCCAC ACGAGAGTGAAGAGACTGCTGAGAAGCCACTTCAAAATGAAGCTAATGCTGAAAGCACAA CAAAACAAAGTGATCTCAGTCTTGAGAAGCCACCTCAGGTTGATGCCAATGTTGGGAATC CTACCGAGCCTGAAAGTGATGCCACTTCTGGTGTGAACTCATCAGATGCTCAAATCAGGC CAACTGCTGAGCAGTTAGTAGGACCTCAAGGCATTGTATCTGCCGAGAAGACATCTGACC AGATATTAGAAGCTAACACCGATCCAGCTGCTGACCAGTCATCAGAGTCCCAAGATGTTG CACCTGCTAAAGTTGCAACGGAGCAACCATTAGAAAATCAAAAGGCTGCAGCTTCAGAGC AGCCATTGGAACCTCAACACGAAGCATATGAAGAGAATCCACAAGAGCATAATAGTGATG CAACTGCCAAGGAGTCATCAGAACCTGAAAGAGATACTGCTTCTGATCAGTTGGCTGAGC AGCCATCAGAATCTCGAACTGCAGGTGAGAAGGCAACACTGCGTGAAAGTGATGTGGTTA CCGAGGATCCAGCAGAACCTCAAATTGATGCAGCTGCTGAAAGGTCAGCTGAGGTGTTAT CAGAATCTCAAACTGGAGTTGAGACACCAGTGCTGCATCAAAGTGATAGAACTAACGAGG TTCCATCAGAACCTCAAACTGATGAAGCTTCTGACAAGTCAACTGAGCAGCCATTGGAGC CTGAAAATGATGCATCTGTCGAGGATGAGAAGCCACCGGAAATCGAAAGTGATGATGTGC ATGATAAACCATCAGAAAGCACCCCAGATACTGAAACCCTGCCTCATAACACTCCAAAGA GTAGCATAAGCATTAGCGAAGCTGCAGACGGCAACGTTTCTGAGGAGGCACCACCTCAGA GCAGTGCATCCATAGAAACGCCATCAGAAAGTGCCATAGCTGTCGAGGAACCAAAACACG ACGACGAGGCCAGCATAAAGCCATCCGAAGACAGCAGTGCTCTTGAGGAGCCGCCGCAGG ACGATAGCGCCAGCGTGGAGCCATCAGAGAACACTATAACTCTTGAGAAGGCATCAGAGG AAGATGAGGGAAGTGTAAAGCCATCAGAAGGCAATGATGCTCTTGAGAAAACATTGGAGG AGGATGAGGCGAGTGCCAAGCTACCAGAAGACAGTACGACCTTTGAGAAGCCATCGGAGA AAGATGATGCTGGCACCAAGCAGACAGAGGACCCTGTAACTCTTGAGAAGGAACCAGAGG AAGACAAGGGAAGTGTGGAGCCAACACAGGACAATGCTGGTCTTGAGAAACCGTTGGAGG AAGACGAGGCGAGTGCGAAGCCATCAGAGGACAGTGTGGTTCTTGATAAGCCATCAGTGG AAGATGATGACAGCGCCAAGCCATCAGAGGATAGCATGGACCTTGAAAAGCCAGAGGCTC ACAAACCATCAGAGGAAGAAGATGGCGCGACCAAGTCATCACCGGAGGATGCTGCCGTTG AGGAGGCGCCATTGCAAGGTGACACAGAAACAGCCACTGACAAACCCTCACTAGAAGCAG ACACCACAGAAACTGCCTGAGCTGGTTACAGTTAGTTAGCAACAGTACACAGTTTTTAAC CCAGATGGGTGGATACTACTGTTGATACTTTGGTTTGCCATTTTGCTTGTTTTCTTGTTT TGTACAATGCTTGAGTTGTAAAATTTGAGGGAAAACAGAAAAGGAACTATAGGTATTGAT TTG