Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0233800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6953695:6956081:-1 gene:Os06g0233800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0233800-01)
Sequence

ATGGATGAGCAGCTGAGCCCGGTGGCCGTGACGCACTTGCTGCAGCACACGCTGCGGAGC
CTCTGCACCAGCGGCGACGACTCCCAGTGGGTCTACGCCGTCTTCTGGCGCATCCTCCCC
CGCAACTACCCTCCCCCAAAATGGGATCTCCCCGGTGGGGCATACGACAGGACAAGAGGA
AACAGGAGGAACTGGATCTTGGCGTGGGAGGACGGGTTCTGCAACTTCGCGGCCACCTCC
GCCGCCTGCGGCGACGGCGCGGCGGCGGCTTACGCGGCCGCGGAATGCGAGGAGACGAAG
CAGGTTGGCGTCGCCGGCGGCGGCCTGCAGCCTGAGCTCTTCTTCAAGATGTCCCATGAC
ATCTACAACTACGGCGAAGGGTTGATAGGGAAGGTGGCGGCGGACCACAGCCACAAGTGG
GTGTTCAAGGAGCCGCAGGAGCAAGAGATCAACCTCATCTCCTCCTGGAACAACCCTGCC
GATTCTCATCCGAGGACATGGGAGGCGCAGTTCCAGTCTGGTATCCAGACCATCGCCCTG
ATCGCTGTCAGAGAAGGCGTCGTGCAGCTCGGCTCCATGAAAAAGGTGGCGGAGGACCTG
AGCTACGTGGTGGCGCTGCGGCGGAAGTTCGGGTACCTGGAGAGCATCCCGGGTGTGCTG
CTGCCACACCCGTCGTCGGCGGCGGCGGCGTTCCCGGGAGGGCCGCCGGACGCCGCGGGG
TGGCCAGCCGGAATGATGGTGTCGCCGCCGGTGCCACCGGAGCTCTACGTCGACCCCTAC
GGCGGGGCGGCGGCCGGGGCCGTGCCGCCGCCGTCCATGCAGATAATGCCGTCGATGAGC
AGCCTCGAGGCGCTGCTCTCGAAGCTGCCCTCCGTCGTGCCGGCGGCGGCGGCGCCCTCG
CCGCCGCCGGGGTCGTCGTCCATGCCACCTACCGGCGCCGCCGCCGCGTCGTCAGCGCCG
CCCAAGGAGGAAGCGGCCGAGGACGACTACGTCCATTGCCACGGCATGGACATGGCGACG
TCGTCGACCAACGGCGGCGGCGAGAGCACCGGCGGCGCTCCATTGCCGTCGTCCTACTTC
GTCAACGTGGGCGTCAAGCCCAGCGAGGGGTTTTAG

Peptide Sequence

PEP ID

Os06t0233800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6953695:6956081:-1 gene:Os06g0233800 transcript:Os06t0233800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0233800-01)
Sequence

MDEQLSPVAVTHLLQHTLRSLCTSGDDSQWVYAVFWRILPRNYPPPKWDLPGGAYDRTRG
NRRNWILAWEDGFCNFAATSAACGDGAAAAYAAAECEETKQVGVAGGGLQPELFFKMSHD
IYNYGEGLIGKVAADHSHKWVFKEPQEQEINLISSWNNPADSHPRTWEAQFQSGIQTIAL
IAVREGVVQLGSMKKVAEDLSYVVALRRKFGYLESIPGVLLPHPSSAAAAFPGGPPDAAG
WPAGMMVSPPVPPELYVDPYGGAAAGAVPPPSMQIMPSMSSLEALLSKLPSVVPAAAAPS
PPPGSSSMPPTGAAAASSAPPKEEAAEDDYVHCHGMDMATSSTNGGGESTGGAPLPSSYF
VNVGVKPSEGF

Transcript Sequence

Transcript ID

Os06t0233800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6953695:6956081:-1 gene:Os06g0233800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0233800-01)
Sequence

GTGGTGGCCTGGCCGCACAAGTCACAGCCATACAGGGAGAGAGAGAGAGAGATCACTTCA
CAAGCAAGAATGGAAGCACCTCCTTGTTGCCACTCCAAGATCCTTCACTACCATAGCTAA
GCTAGCTACTCGTATCCTCTTCTCTCTCTGCTTCTGCTCTTCCGACGAGTAGAGCATAAT
CCATCCGGAGGAAGAGAGTGCAATCGATCAGCTGAGCTAAGCTTGCCTGGTGATCGATCG
ATCACGGAGCTCGCCACCGGCGGCGGCGGAGGAGGAGACGATGGATGAGCAGCTGAGCCC
GGTGGCCGTGACGCACTTGCTGCAGCACACGCTGCGGAGCCTCTGCACCAGCGGCGACGA
CTCCCAGTGGGTCTACGCCGTCTTCTGGCGCATCCTCCCCCGCAACTACCCTCCCCCAAA
ATGGGATCTCCCCGGTGGGGCATACGACAGGACAAGAGGAAACAGGAGGAACTGGATCTT
GGCGTGGGAGGACGGGTTCTGCAACTTCGCGGCCACCTCCGCCGCCTGCGGCGACGGCGC
GGCGGCGGCTTACGCGGCCGCGGAATGCGAGGAGACGAAGCAGGTTGGCGTCGCCGGCGG
CGGCCTGCAGCCTGAGCTCTTCTTCAAGATGTCCCATGACATCTACAACTACGGCGAAGG
GTTGATAGGGAAGGTGGCGGCGGACCACAGCCACAAGTGGGTGTTCAAGGAGCCGCAGGA
GCAAGAGATCAACCTCATCTCCTCCTGGAACAACCCTGCCGATTCTCATCCGAGGACATG
GGAGGCGCAGTTCCAGTCTGGTATCCAGACCATCGCCCTGATCGCTGTCAGAGAAGGCGT
CGTGCAGCTCGGCTCCATGAAAAAGGTGGCGGAGGACCTGAGCTACGTGGTGGCGCTGCG
GCGGAAGTTCGGGTACCTGGAGAGCATCCCGGGTGTGCTGCTGCCACACCCGTCGTCGGC
GGCGGCGGCGTTCCCGGGAGGGCCGCCGGACGCCGCGGGGTGGCCAGCCGGAATGATGGT
GTCGCCGCCGGTGCCACCGGAGCTCTACGTCGACCCCTACGGCGGGGCGGCGGCCGGGGC
CGTGCCGCCGCCGTCCATGCAGATAATGCCGTCGATGAGCAGCCTCGAGGCGCTGCTCTC
GAAGCTGCCCTCCGTCGTGCCGGCGGCGGCGGCGCCCTCGCCGCCGCCGGGGTCGTCGTC
CATGCCACCTACCGGCGCCGCCGCCGCGTCGTCAGCGCCGCCCAAGGAGGAAGCGGCCGA
GGACGACTACGTCCATTGCCACGGCATGGACATGGCGACGTCGTCGACCAACGGCGGCGG
CGAGAGCACCGGCGGCGCTCCATTGCCGTCGTCCTACTTCGTCAACGTGGGCGTCAAGCC
CAGCGAGGGGTTTTAGCCTCAGTCCCTAGCTAAGCTACAGTTAGCTTAGCTACTAGCTAC
CTCTTCCTCATGCCTCTCTCTCAAAGTGTACGTGTAGTCTCGTGTACTATTATTACCTGT
GGGCGCCAAGGCATGGCAATGCATGGCAATGGTGTTCATTCATGATCATATCTCTAGTGT
CAATTAAATTCAATTAATGAATTAATCACTTGCTAATTG