Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0233400-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:6928598:6932468:-1 gene:Os06g0233400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defective in cullin neddylation domain containing protein. (Os06t0233400-01);Defective in cullin neddylation domain containing protein. (Os06t0233400-02)
Sequence

ATGCATAAGCTGGGGAGAGGAAGCCGCGACAAGGTGCAGCAGTTCATGACCATAACTGGT
GCGAGTGAGAAGGTCGCCCTTCAGGCCCTGAAAGCTAGTGATTGGCACTTGGAAGGAGCT
TTTGATTTTTTCTACAGCCAACCACAAATTTCTCTGACGAACTCTCGGCATCTTGAAGAT
CTGTACAACAGATACAAAGAACCTGATGTTGATATGATCATGGTGGAAGGTGTATCTCAG
TTTTGCACTGATCTTCAGGTGGATCCCCAGGATATTGTTATGCTTGTCATATCATGGCAC
ATGAAAGCTGCCACAATGTGTGAATTTACTCGCCAGGAATTCATTGGTGGACTGCAGTCA
ATTGGGGTGGATTCAATTGAAAAGCTCCGTGAGAAATTGCCATCTTTACGGGCTGAGATA
AAAGATGACCATAAATTCCGTGAGATATACAACTTTGCTTTTGCTTGGGCTAGGGAAAAG
GGTCAAAAATCTCTCGCACTGGAGACTGCTCTTGGAATGTGGCAGTTGCTCTTTGCTGAA
AGGCACTGGCCCCTTATCGACCATTGGTGCCAGTTTTTACAGGTGAGGCATAATAAAGCC
ATTTCTAGGGACACATGGTCTCAACTGTTGGAATTTGTCAAGACGATCGATCCACAGTTA
TCCAACTACGACGAAGAAGGTGCTTGGCCCTACCTAATAGATGAATTTGTGGAGTACCTA
ACCGAGAATGGATTCGTTCAGCTTAGGAAGTGA

Peptide Sequence

PEP ID

Os06t0233400-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:6928598:6932468:-1 gene:Os06g0233400 transcript:Os06t0233400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defective in cullin neddylation domain containing protein. (Os06t0233400-01);Defective in cullin neddylation domain containing protein. (Os06t0233400-02)
Sequence

MHKLGRGSRDKVQQFMTITGASEKVALQALKASDWHLEGAFDFFYSQPQISLTNSRHLED
LYNRYKEPDVDMIMVEGVSQFCTDLQVDPQDIVMLVISWHMKAATMCEFTRQEFIGGLQS
IGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWAREKGQKSLALETALGMWQLLFAE
RHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDPQLSNYDEEGAWPYLIDEFVEYL
TENGFVQLRK

Transcript Sequence

Transcript ID

Os06t0233400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6928598:6932468:-1 gene:Os06g0233400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defective in cullin neddylation domain containing protein. (Os06t0233400-01);Defective in cullin neddylation domain containing protein. (Os06t0233400-02)
Sequence

AAAGCCAGCCAGGCGAGGGAGGAAGGAAGGAAGAAGAGCAGGAGGAGCCCAACGCCCGCG
AAACCCTAGCCCTCGCGCTCGCCCACCGCCTTCCTCTCCCCCCCTACCCTACCCCGAGCT
CGCCACCCGATCCGATCGAAGATGCATAAGCTGGGGAGAGGAAGCCGCGACAAGGTGCAG
CAGTTCATGACCATAACTGGTGCGAGTGAGAAGGTCGCCCTTCAGGCCCTGAAAGCTAGT
GATTGGCACTTGGAAGGAGCTTTTGATTTTTTCTACAGCCAACCACAAATTTCTCTGACG
AACTCTCGGCATCTTGAAGATCTGTACAACAGATACAAAGAACCTGATGTTGATATGATC
ATGGTGGAAGGTGTATCTCAGTTTTGCACTGATCTTCAGGTGGATCCCCAGGATATTGTT
ATGCTTGTCATATCATGGCACATGAAAGCTGCCACAATGTGTGAATTTACTCGCCAGGAA
TTCATTGGTGGACTGCAGTCAATTGGGGTGGATTCAATTGAAAAGCTCCGTGAGAAATTG
CCATCTTTACGGGCTGAGATAAAAGATGACCATAAATTCCGTGAGATATACAACTTTGCT
TTTGCTTGGGCTAGGGAAAAGGGTCAAAAATCTCTCGCACTGGAGACTGCTCTTGGAATG
TGGCAGTTGCTCTTTGCTGAAAGGCACTGGCCCCTTATCGACCATTGGTGCCAGTTTTTA
CAGGTGAGGCATAATAAAGCCATTTCTAGGGACACATGGTCTCAACTGTTGGAATTTGTC
AAGACGATCGATCCACAGTTATCCAACTACGACGAAGAAGGTGCTTGGCCCTACCTAATA
GATGAATTTGTGGAGTACCTAACCGAGAATGGATTCGTTCAGCTTAGGAAGTGAACAATG
GGAGGCCCACATTCTCACTACTTCAAATACAATCATGATTGGGCTGTACAAACGTGTGAG
ATTCATCTCGGTCTATACAGTGTTCAGGGCTTGGCCTTGGCGTTCTTGCGCAACTGATCG
CAAACAGTGGACATGTATCCTTACGTGATGACATTTGCTCGCGCAAGGGGACGATTTGAT
TTGGGAAGTGGTGACTGCCATTGTGGAATTATCACTTACGGTTTATTTAATATATATTGT
GGTCGGCGCAG