Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0233200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6923330:6924997:-1 gene:Os06g0233200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0233200-01)
Sequence	ATGGAGGCGCTCTCCCGGACCGAGCGTGTAGGAGGAGGAGGTGGAGCCATGGTTGAAGTG GCCTTCGCTTCGTCCGCCGGATCCTCCGCCGCGGCCCCGCGCCGCCTTCGTGGGGAGCTC GTCGTCAGGGACGCTATTCCGTATGCCGGGGTGGCTCCTCCGCCGCCCGCGCTGCCGCTG CCGCAGCCGCAGCTGCAGCCGCAGGTGCAGGCTACGACGAGTGGGGGCGGCGGCGGGGGG AAGATTAGCCCCGCGGTGCTGTTCATCATCGTGATTCTCGCGGTGGTGTTCTTCATCTCC GGCTTGCTCCACCTCCTGGTGCGGCTACTCATGAAGAAGCAGCATCGCCGCGGAGGAGGA GGGGGTGCGGCGGCCGGGGTGTCGCGGTCGGCCGCCGGGGATGACGCGGGGGGAGGAGGG GACGCGGCGCTGCAGCGGCAGCTGCAGCAGCTGTTCCACCTTCACGACTCCGGGCTGGAC CAGGCGTTCATCGACGCGCTGCCGGTGTTCGCCTACCGGGAGATCGTCGTGGGCGGCGGC GGCGACGGCGACAAGGAGCCCTTCGACTGCGCGGTGTGCCTGTGCGAGTTCGACGCCGAG GACCGCCTCCGGCTGCTGCCGCTGTGCGGGCACGCCTTCCACCTGCATTGCATCGACACA TGGCTGCTGTCCAACTCCACCTGCCCGCTCTGTCGCGGGGTGCTCTTTGTCCCTGGGCTC ACGGAGAACAATCCGATGTTTGATTTCGATGAGGGGTTGGAAGAAGGGAGGCTGTCTGAA GATTGCGATAACGGATTCGGATATCCCGGGCACAAGGCTACGGAGGGGATGCAGACGCCA GGGACTGAGAAGAGGGTGTTCCCTGTGAGGCTTGGGAAGTTCAAGAATGTCGGGACCCAG GGCGCTGTCGAAGGCGGTGGCATCGGCAATGCCAATGGTGCTGTCTTGAGGAGAGAGGAA GGGGAGAGCAGCAGCAGCAGCTTGGATGCAAGGAGATGCTTCTCAATGGGGACTTACCAG TATGTTCTAGGGACCTCAGAGCTCAGGGTGTCTCTCCAGCCAGACCGAATTAGAAATGGC GGCGGCGGTGTGACGAGGGCAAGGCCGACAGGGTTAAGCTCTGTCAATGCTGAGATCATG GAGGGGAAGAAGATATGCGCACGGAACAAAGGGGAGAGCTTCTCTGTGTCGAAGATTTGG CAGTGGTCTAATCTGAAGGGCAAGCTACCTACTGGCTCAGATGAATGTTCGGAAGCAGGG AGCCTTCCATGGATGAAGAGAGGTGGCATTGGGGATACATCAAATATGTGA

Peptide Sequence

PEP ID	Os06t0233200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6923330:6924997:-1 gene:Os06g0233200 transcript:Os06t0233200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0233200-01)
Sequence	MEALSRTERVGGGGGAMVEVAFASSAGSSAAAPRRLRGELVVRDAIPYAGVAPPPPALPL PQPQLQPQVQATTSGGGGGGKISPAVLFIIVILAVVFFISGLLHLLVRLLMKKQHRRGGG GGAAAGVSRSAAGDDAGGGGDAALQRQLQQLFHLHDSGLDQAFIDALPVFAYREIVVGGG GDGDKEPFDCAVCLCEFDAEDRLRLLPLCGHAFHLHCIDTWLLSNSTCPLCRGVLFVPGL TENNPMFDFDEGLEEGRLSEDCDNGFGYPGHKATEGMQTPGTEKRVFPVRLGKFKNVGTQ GAVEGGGIGNANGAVLRREEGESSSSSLDARRCFSMGTYQYVLGTSELRVSLQPDRIRNG GGGVTRARPTGLSSVNAEIMEGKKICARNKGESFSVSKIWQWSNLKGKLPTGSDECSEAG SLPWMKRGGIGDTSNM

Transcript Sequence

Transcript ID	Os06t0233200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6923330:6924997:-1 gene:Os06g0233200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os06t0233200-01)
Sequence	ATCACATCACGCGGCCTCCTCCTCCTCCACCACCGCCGCGCCGTCGCGTTCGCCTTTTTT CCTCCTTCCCGGACCTCGTGCGCTCCCACCACCACCACCCCGCGGCTTCGCTCGCGCCAC CGCCACTGATTCGCCGGAGAGTTGCTGTTCCCTTCGTGATTTCGTCGGCGGTGGCGGCGG CGGGGGTGGTCTCCTGTTGCTGTACAGACCAGCATCGTTGGGGGGAATCGGATGAGATGA GATGAGATGAGATGCGGGGGTGGTGGTGATGGAGGCGCTCTCCCGGACCGAGCGTGTAGG AGGAGGAGGTGGAGCCATGGTTGAAGTGGCCTTCGCTTCGTCCGCCGGATCCTCCGCCGC GGCCCCGCGCCGCCTTCGTGGGGAGCTCGTCGTCAGGGACGCTATTCCGTATGCCGGGGT GGCTCCTCCGCCGCCCGCGCTGCCGCTGCCGCAGCCGCAGCTGCAGCCGCAGGTGCAGGC TACGACGAGTGGGGGCGGCGGCGGGGGGAAGATTAGCCCCGCGGTGCTGTTCATCATCGT GATTCTCGCGGTGGTGTTCTTCATCTCCGGCTTGCTCCACCTCCTGGTGCGGCTACTCAT GAAGAAGCAGCATCGCCGCGGAGGAGGAGGGGGTGCGGCGGCCGGGGTGTCGCGGTCGGC CGCCGGGGATGACGCGGGGGGAGGAGGGGACGCGGCGCTGCAGCGGCAGCTGCAGCAGCT GTTCCACCTTCACGACTCCGGGCTGGACCAGGCGTTCATCGACGCGCTGCCGGTGTTCGC CTACCGGGAGATCGTCGTGGGCGGCGGCGGCGACGGCGACAAGGAGCCCTTCGACTGCGC GGTGTGCCTGTGCGAGTTCGACGCCGAGGACCGCCTCCGGCTGCTGCCGCTGTGCGGGCA CGCCTTCCACCTGCATTGCATCGACACATGGCTGCTGTCCAACTCCACCTGCCCGCTCTG TCGCGGGGTGCTCTTTGTCCCTGGGCTCACGGAGAACAATCCGATGTTTGATTTCGATGA GGGGTTGGAAGAAGGGAGGCTGTCTGAAGATTGCGATAACGGATTCGGATATCCCGGGCA CAAGGCTACGGAGGGGATGCAGACGCCAGGGACTGAGAAGAGGGTGTTCCCTGTGAGGCT TGGGAAGTTCAAGAATGTCGGGACCCAGGGCGCTGTCGAAGGCGGTGGCATCGGCAATGC CAATGGTGCTGTCTTGAGGAGAGAGGAAGGGGAGAGCAGCAGCAGCAGCTTGGATGCAAG GAGATGCTTCTCAATGGGGACTTACCAGTATGTTCTAGGGACCTCAGAGCTCAGGGTGTC TCTCCAGCCAGACCGAATTAGAAATGGCGGCGGCGGTGTGACGAGGGCAAGGCCGACAGG GTTAAGCTCTGTCAATGCTGAGATCATGGAGGGGAAGAAGATATGCGCACGGAACAAAGG GGAGAGCTTCTCTGTGTCGAAGATTTGGCAGTGGTCTAATCTGAAGGGCAAGCTACCTAC TGGCTCAGATGAATGTTCGGAAGCAGGGAGCCTTCCATGGATGAAGAGAGGTGGCATTGG GGATACATCAAATATGTGACTGTAGTCTGTATTATGATAGTGGCTAATCTTTTCTCTTGT TGGTGCTGCTCACTTAATCTCTTACCTATAGTTATCTTGACTTTTTTC