Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0231300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6794151:6796570:1 gene:Os06g0231300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Regulator of XA21-3 description:CS domain domain containing protein. (Os06t0231300-01)
Sequence

ATGGCGATCATCTCCGACTTCCAGGAGGAAGAGGCTCCGCCGCGGCAGCAGCAGCAACCG
GCTTCGGTGGCGGCGGCGGCGGGGAGCGGCGACGAGGTCCTCGCGGCGGAGCTGGAGCGG
AGGGGCGGCGCGATCCCCTTCCTCCAGGCGGCAATCGACGTGGCGAGGCGGCGGTCCGAC
CTGTTCCGCGACCCCTCCGCGGTGAGCAGGGTCACATCGATGGCGTCGGCGGCGAGGGCG
GTGGTGGAGGCGGAGGAGAGGAAGGCGAGGGAGGCCAAGAGGAAGGCGGAGGAGGCGGAG
AGGAAGGCGGCCGAGGCCGAGAGGAAGGCGAAGGCGCCCGCGGAGCCGAAGCCGGAGAGC
TCGGCGGGGAAGGATAGCATGGAGGTGGACAAGAAGGAGGAGGGCAACGTGAGGAAACCA
AATGCTGGCAATGGTCTTGATTTGGAGAAGTACTCTTGGATTCAGCAATTGCCAGAGGTT
ACCATCACCGTACCTGTTCCTCAAGGAACGAAGTCAAGGTTTGTCGTCTGTGATATTAAG
AAGAACCATCTGAAGGTTGGGCTGAAGGGCCAGCCTCCTATCATTGATGGTGAGCTTTTC
AAACCAGTCAAAGTTGATGACTGCTTCTGGAGCATAGAGGATGGAAAATCGCTGTCCATT
TTGCTGACAAAGCAAAATCAAATGGAGTGGTGGAAATCCGTAGTGAAGGGTGACCCTGAA
GTTGATACACAGAAGGTGGAACCGGAGAACAGCAAACTCGCTGATTTGGATCCAGAGACT
CGACAAACTGTGGAGAAGATGATGTTTGATCAACGCCAGAAGCAGATGGGTCTTCCAACA
AGTGATGAAATGCAGAAGCAAGACATGCTCAAGAAATTCATGGCTCAGCACCCGGAGATG
GACTTCTCCAATGCAAAAATAGCTTAG

Peptide Sequence

PEP ID

Os06t0231300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6794151:6796570:1 gene:Os06g0231300 transcript:Os06t0231300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Regulator of XA21-3 description:CS domain domain containing protein. (Os06t0231300-01)
Sequence

MAIISDFQEEEAPPRQQQQPASVAAAAGSGDEVLAAELERRGGAIPFLQAAIDVARRRSD
LFRDPSAVSRVTSMASAARAVVEAEERKAREAKRKAEEAERKAAEAERKAKAPAEPKPES
SAGKDSMEVDKKEEGNVRKPNAGNGLDLEKYSWIQQLPEVTITVPVPQGTKSRFVVCDIK
KNHLKVGLKGQPPIIDGELFKPVKVDDCFWSIEDGKSLSILLTKQNQMEWWKSVVKGDPE
VDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKQMGLPTSDEMQKQDMLKKFMAQHPEM
DFSNAKIA

Transcript Sequence

Transcript ID

Os06t0231300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6794151:6796570:1 gene:Os06g0231300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Regulator of XA21-3 description:CS domain domain containing protein. (Os06t0231300-01)
Sequence

CTCGAAAACCCTCGCGAATCTGAGATCCCCAAGAATTCCTTCTCGAAAACCCTAGAGGAG
AGCGAGAGAGAAGAGGAGGCGGCGGCGGCGGCGGCGGAAGCACATGGCGATCATCTCCGA
CTTCCAGGAGGAAGAGGCTCCGCCGCGGCAGCAGCAGCAACCGGCTTCGGTGGCGGCGGC
GGCGGGGAGCGGCGACGAGGTCCTCGCGGCGGAGCTGGAGCGGAGGGGCGGCGCGATCCC
CTTCCTCCAGGCGGCAATCGACGTGGCGAGGCGGCGGTCCGACCTGTTCCGCGACCCCTC
CGCGGTGAGCAGGGTCACATCGATGGCGTCGGCGGCGAGGGCGGTGGTGGAGGCGGAGGA
GAGGAAGGCGAGGGAGGCCAAGAGGAAGGCGGAGGAGGCGGAGAGGAAGGCGGCCGAGGC
CGAGAGGAAGGCGAAGGCGCCCGCGGAGCCGAAGCCGGAGAGCTCGGCGGGGAAGGATAG
CATGGAGGTGGACAAGAAGGAGGAGGGCAACGTGAGGAAACCAAATGCTGGCAATGGTCT
TGATTTGGAGAAGTACTCTTGGATTCAGCAATTGCCAGAGGTTACCATCACCGTACCTGT
TCCTCAAGGAACGAAGTCAAGGTTTGTCGTCTGTGATATTAAGAAGAACCATCTGAAGGT
TGGGCTGAAGGGCCAGCCTCCTATCATTGATGGTGAGCTTTTCAAACCAGTCAAAGTTGA
TGACTGCTTCTGGAGCATAGAGGATGGAAAATCGCTGTCCATTTTGCTGACAAAGCAAAA
TCAAATGGAGTGGTGGAAATCCGTAGTGAAGGGTGACCCTGAAGTTGATACACAGAAGGT
GGAACCGGAGAACAGCAAACTCGCTGATTTGGATCCAGAGACTCGACAAACTGTGGAGAA
GATGATGTTTGATCAACGCCAGAAGCAGATGGGTCTTCCAACAAGTGATGAAATGCAGAA
GCAAGACATGCTCAAGAAATTCATGGCTCAGCACCCGGAGATGGACTTCTCCAATGCAAA
AATAGCTTAGAACTTATAAATCGAGAGTGACCAGCAGTATGGAGAAGGTTGGAGATGCTG
AATGGAGAACTACATTTCATCTCGTTCTTAGTGTCTGTCGATGGATGGTTTACGGGTAGT
GTCTGTCGATGGATGGTTTACGGGTTTAGCCGTGAGGTGATTGGCCTCACGTCATTTTGT
GAATTTTGTGTTCTTCAGAAACGTGAATCCGTGCTGTTTCCTGAACCTTTGAATGGATAG
TAAAATCAGTTGCACCCCAGTG