Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0229300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6725343:6734351:1 gene:Os06g0229300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAZ1 description:Similar to Hox2b protein. (Os06t0229300-01)
Sequence	ATGGATAAGACAACTACTTCTGATCTTGTTTTGGACAACGACAACATTGGGAGTAATGCT GGTTCTGCACAGGAGCCTCTTACTACCAATGGTAAGACTAGTGGGGTCAGAAATAGATAC AAACAAACTGTTAAAAGGGGAAGGAAAGGCTCCCAAATATCACCAAGTAAAACATATCCC CTGAGATCTTCACATAGTAATGTCAGGGTGCTTCGCTCTGCCTCAAAAAAGAAGAATGAG ACACCTATTGTGCCCACAAATGATAATACTGCTGTTCAACGAGTTGCGAAGAAAAGGAAA AGAAGCAAACCCTTGAGACCTGCACCTAGCAGGGTGCTTCGCTCTACCTCGGAAAAGAAG AATAAGGCACATAATGAGCTTCTAAATGATGGTGCTGGTGTTCAACCAGCCGAAAAGAAA AGAAAGGTAGGCAGACCCCCAAAAGGAGGAACTCCCAAGGACGATTACCTCATGATCCGA AAGCGAGTTAGATATGTTTTGAATCGAATGAACTATGAACAAAGTTTAATTCAAGCCTAT GCCAGTGAAGGTTGGAAAGGTCAAAGCTTGGAAAAAATAAGACCTGAGAAGGAGCTTGAA CGAGCCAAGGTGGAAATTCTGCGATGCAAGTCAAGAATACGGGAAGCTTTTCGGAATTTG GATTCCCTCCTATCTGAGGGAAAGCTGGATGAATCTATGTTTGATTCTGCTGGAGAAATA TCTAGTGAAGATATTTTCTGTGCTGCATGTGGTTCAAAGGATGTTACATTAAAAAATGAC ATAATTCTTTGTGATGGAATCTGCGACAGAGGGTTCCACCAGTATTGTTTAAACCCTCCT TTGCTTGCTGAAGATATTCCACAGGGGGATGAAGGATGGCTTTGCCCTGCATGTGATTGC AAAATTGACTGCATAGATGTATTAAATGAACTCCAAGGGGTCAAACTCTCTATCCATGAC TCTTGGGAGAAAGTTTTTCCTGAGGCAGCATCCTTTTTGAATGGTTCTAAGCAAATTGAT GCGTCCGATCTTCCATCAGATGATTCAGCAGACAATGATTATGACCCTACTTTGGCTCAA GGGCACAAGGTGGATGAAGAAAAATCTTCTGGAGAAGATGGTGGTGAAGGATTAGATTCT GATGACTCATCTTCTGAGGATTCTGAATCTTCTGAGAAGGAAAAGTCTAAAACTTCACAG AATGGAAGGACAGTTGATGATCTTGGTTTGCCTTCTGAGGATTCAGAGGATGGTGACTTT GATCCAGCAGGTCCAGATTCCGACAAAGAACAAAATGATGAATCAAACTCAGATCAGTCA GATGAATCAGATTTTACATCTGACTCTGATGATTTTTGTGCTGAGATTGCTAAATCCTGT GGTCAGGATGAAATCTCAGGCCCTTCATCATCACAAATCAGAACAGTCGATCGCACCGAT GGAAGTGGTTTTGATGGTGAGCCTAATGCAGAAAATTCGAATCTTGCATTTATGGAGACA GAGCTAGAGCAAGACATGGTGCTACCAATTTCTAGTAAACGACAAGTTGAACGTTTGGAT TACAAAAAACTGTATAATGAGGCTTATGGTAAAGCATCATCTGATTCAAGTGACGATGAA GAGTGGTATGGAAATAGTACACCCGAAAAAGGTAATTTAGAAGACAGTGAAACAGATTCG CTTGCTGAATCACCTCAGGGTGGAAAAGGATTCTCTAGAAGAGCACCAGTTAGGTACCAT AATAATGAACATACTCCACAGAATGTAAGGCCCGGTGGTTCAGTAAGCGACCAGCAAACT GAAGTACTTTGCTCCAATAGCAATGGTAGCACAGCCAAAAACAGACATTTTGGTCCTGCA ATTAATCAGAAACTGAAGGCACATTTCAAGGAAGATCCATACCCTAGTCGTGCAACAAAA GAAAATCTGGCACAAGAGTTAGGCCTCACATTTAATCAGGTCACTAAATGGTTTTCCAGT ACTCGTCATTACGCAAGAGTGGCAGCCACAAAAAAGGAGAACAACATTGAAAATCATACG GCTGAGAATAATAACAATACCAACACTGTTGATAGCATACAACTGAGAGGATCCAATGAT ATTGTTAGTGTAGATAGAAATGATATGGTCTCCGAGGAAAGGACAGGACAAAGTAATCTC AATGAAGGTACTCCATTAAGATCAGATACCAGCTGTGGGCAGAGTGTGGCTGTGACTCCT ATGGTACACCCAGAAAACCAGGGCAATGATTCCTCAAGTAATGTTAGAACACCAAATGCT AAGTCTGCGGAGAAATTGATCCCTGGACTGGAAAATTCAGATGAGGCTAGGCGAAAGGCG GTACAACGGGAACTGAGAAAGATGAAGACTGGCAGGTGA

Peptide Sequence

PEP ID	Os06t0229300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6725343:6734351:1 gene:Os06g0229300 transcript:Os06t0229300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAZ1 description:Similar to Hox2b protein. (Os06t0229300-01)
Sequence	MDKTTTSDLVLDNDNIGSNAGSAQEPLTTNGKTSGVRNRYKQTVKRGRKGSQISPSKTYP LRSSHSNVRVLRSASKKKNETPIVPTNDNTAVQRVAKKRKRSKPLRPAPSRVLRSTSEKK NKAHNELLNDGAGVQPAEKKRKVGRPPKGGTPKDDYLMIRKRVRYVLNRMNYEQSLIQAY ASEGWKGQSLEKIRPEKELERAKVEILRCKSRIREAFRNLDSLLSEGKLDESMFDSAGEI SSEDIFCAACGSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPACDC KIDCIDVLNELQGVKLSIHDSWEKVFPEAASFLNGSKQIDASDLPSDDSADNDYDPTLAQ GHKVDEEKSSGEDGGEGLDSDDSSSEDSESSEKEKSKTSQNGRTVDDLGLPSEDSEDGDF DPAGPDSDKEQNDESNSDQSDESDFTSDSDDFCAEIAKSCGQDEISGPSSSQIRTVDRTD GSGFDGEPNAENSNLAFMETELEQDMVLPISSKRQVERLDYKKLYNEAYGKASSDSSDDE EWYGNSTPEKGNLEDSETDSLAESPQGGKGFSRRAPVRYHNNEHTPQNVRPGGSVSDQQT EVLCSNSNGSTAKNRHFGPAINQKLKAHFKEDPYPSRATKENLAQELGLTFNQVTKWFSS TRHYARVAATKKENNIENHTAENNNNTNTVDSIQLRGSNDIVSVDRNDMVSEERTGQSNL NEGTPLRSDTSCGQSVAVTPMVHPENQGNDSSSNVRTPNAKSAEKLIPGLENSDEARRKA VQRELRKMKTGR

Transcript Sequence

Transcript ID	Os06t0229300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6725343:6734351:1 gene:Os06g0229300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAZ1 description:Similar to Hox2b protein. (Os06t0229300-01)
Sequence	GGCGTTGGCACTTAGCAGGCGGCGGCTGCTGCTGCGGCGGCGCAGGGCGGCGGCGGTGCA GAGCGGCGGCGCACGGCTGAGGCGGCGGCGTAGTCGGCGCTCTCCTTCCCTGCTTCTTCC CTCCTTTTTCCTCCCAACCCCGACTCCCGGCGACCGAGGGCTGCAGCTGAGGGCGGCGCG CGGAGGCGGAGGCGGCGGGCGCACGGCTGCGGAGGCTGCTGAGGACGAGCGCGACAACGG AGGCTGCGCGCGGCGGAGGCTGACGGCGGTGAAAGGCACATGCTCATTTATCTAGACTGT ATCTTGGTTATAACCCCTTCCTCAAAGCATTTATCCAGGACTTCCCTAAGCTTATCAAGA CTGATCTATCTGTTCCTACAGAGGAGGTCCATTTGCAGCTATCATTTGTATGGATAAGAC AACTACTTCTGATCTTGTTTTGGACAACGACAACATTGGGAGTAATGCTGGTTCTGCACA GGAGCCTCTTACTACCAATGGTAAGACTAGTGGGGTCAGAAATAGATACAAACAAACTGT TAAAAGGGGAAGGAAAGGCTCCCAAATATCACCAAGTAAAACATATCCCCTGAGATCTTC ACATAGTAATGTCAGGGTGCTTCGCTCTGCCTCAAAAAAGAAGAATGAGACACCTATTGT GCCCACAAATGATAATACTGCTGTTCAACGAGTTGCGAAGAAAAGGAAAAGAAGCAAACC CTTGAGACCTGCACCTAGCAGGGTGCTTCGCTCTACCTCGGAAAAGAAGAATAAGGCACA TAATGAGCTTCTAAATGATGGTGCTGGTGTTCAACCAGCCGAAAAGAAAAGAAAGGTAGG CAGACCCCCAAAAGGAGGAACTCCCAAGGACGATTACCTCATGATCCGAAAGCGAGTTAG ATATGTTTTGAATCGAATGAACTATGAACAAAGTTTAATTCAAGCCTATGCCAGTGAAGG TTGGAAAGGTCAAAGCTTGGAAAAAATAAGACCTGAGAAGGAGCTTGAACGAGCCAAGGT GGAAATTCTGCGATGCAAGTCAAGAATACGGGAAGCTTTTCGGAATTTGGATTCCCTCCT ATCTGAGGGAAAGCTGGATGAATCTATGTTTGATTCTGCTGGAGAAATATCTAGTGAAGA TATTTTCTGTGCTGCATGTGGTTCAAAGGATGTTACATTAAAAAATGACATAATTCTTTG TGATGGAATCTGCGACAGAGGGTTCCACCAGTATTGTTTAAACCCTCCTTTGCTTGCTGA AGATATTCCACAGGGGGATGAAGGATGGCTTTGCCCTGCATGTGATTGCAAAATTGACTG CATAGATGTATTAAATGAACTCCAAGGGGTCAAACTCTCTATCCATGACTCTTGGGAGAA AGTTTTTCCTGAGGCAGCATCCTTTTTGAATGGTTCTAAGCAAATTGATGCGTCCGATCT TCCATCAGATGATTCAGCAGACAATGATTATGACCCTACTTTGGCTCAAGGGCACAAGGT GGATGAAGAAAAATCTTCTGGAGAAGATGGTGGTGAAGGATTAGATTCTGATGACTCATC TTCTGAGGATTCTGAATCTTCTGAGAAGGAAAAGTCTAAAACTTCACAGAATGGAAGGAC AGTTGATGATCTTGGTTTGCCTTCTGAGGATTCAGAGGATGGTGACTTTGATCCAGCAGG TCCAGATTCCGACAAAGAACAAAATGATGAATCAAACTCAGATCAGTCAGATGAATCAGA TTTTACATCTGACTCTGATGATTTTTGTGCTGAGATTGCTAAATCCTGTGGTCAGGATGA AATCTCAGGCCCTTCATCATCACAAATCAGAACAGTCGATCGCACCGATGGAAGTGGTTT TGATGGTGAGCCTAATGCAGAAAATTCGAATCTTGCATTTATGGAGACAGAGCTAGAGCA AGACATGGTGCTACCAATTTCTAGTAAACGACAAGTTGAACGTTTGGATTACAAAAAACT GTATAATGAGGCTTATGGTAAAGCATCATCTGATTCAAGTGACGATGAAGAGTGGTATGG AAATAGTACACCCGAAAAAGGTAATTTAGAAGACAGTGAAACAGATTCGCTTGCTGAATC ACCTCAGGGTGGAAAAGGATTCTCTAGAAGAGCACCAGTTAGGTACCATAATAATGAACA TACTCCACAGAATGTAAGGCCCGGTGGTTCAGTAAGCGACCAGCAAACTGAAGTACTTTG CTCCAATAGCAATGGTAGCACAGCCAAAAACAGACATTTTGGTCCTGCAATTAATCAGAA ACTGAAGGCACATTTCAAGGAAGATCCATACCCTAGTCGTGCAACAAAAGAAAATCTGGC ACAAGAGTTAGGCCTCACATTTAATCAGGTCACTAAATGGTTTTCCAGTACTCGTCATTA CGCAAGAGTGGCAGCCACAAAAAAGGAGAACAACATTGAAAATCATACGGCTGAGAATAA TAACAATACCAACACTGTTGATAGCATACAACTGAGAGGATCCAATGATATTGTTAGTGT AGATAGAAATGATATGGTCTCCGAGGAAAGGACAGGACAAAGTAATCTCAATGAAGGTAC TCCATTAAGATCAGATACCAGCTGTGGGCAGAGTGTGGCTGTGACTCCTATGGTACACCC AGAAAACCAGGGCAATGATTCCTCAAGTAATGTTAGAACACCAAATGCTAAGTCTGCGGA GAAATTGATCCCTGGACTGGAAAATTCAGATGAGGCTAGGCGAAAGGCGGTACAACGGGA ACTGAGAAAGATGAAGACTGGCAGGTGAAACTCCCTAGTGTTCGAGTTATTTGACCAGAT GTGCAGAGAAGCAAGTTTTTGTATGCTGCCTAGATTGCTTTTAATCAGATGTGCAGAGAA GCAAAGATTTTTTTTCCTTCTTGTTTGTGGTCGCAAAAAAGCCTGATTGTTGTAGCTGCT ATGTTTGTTCCCTTTGGCTGTCCATCCAGAATTTCTGATAAGATGACACTTGGAAGCACA TCCTGCAGCACTCCAGTTACAGGAATGGGTTCAGTTGACTGTAACAGTTTAGCATAGTCC GTAGTGGACAGTAGCTGTGTTGTTTGTCGTGCCCTGTAGTCCTGTACTACCTTGAATTAG GACTGCTAAGTGAACCGATACAAGTACTTGTGACTGAAATCTATACCTCTTTTTTTCTTT CCACCTTGGGAATTTGTAGAACAAAACCGATGTCTGATGATATGCTATCTAGGAATAGCA ACTGTTGTATTTTTGT