Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0229066-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:6702956:6704431:-1 gene:Os06g0229066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP-dependent zinc metalloprotease FTSH 6, chloroplastic. (Os06t0229066-00)
Sequence	ATGTCGCCGACGGCGATGTCGCTGACGACGACGACGAGCCGGCTGCCGATCTGCAGGGCG CAGGGCGGCGGCGTCGCCAAGGAGAAGCGGACGACGCCGCCACCTGCCAAGATCACGCCG CCTTCGTCGTCGTCGTCGGAGGCCGCCGGACTAAGCAGGAGGAGGCTGCTGCAATCGGCC GGCCTCGGGCTCGGCCTCGGCCTAACGGCGGCGAGGCCGGCGCGAGCCGAGGCGACGGCG CCGGAGGAGGTGACGTCGAACAGGATGTCCTACTCCCGGTTCCTGGAGTACCTCGACGCC GGCGCCGTCAAGAAGGTGGACTTCTTCGAGAACGGCACGGTGGCCGTCGCCGAGGTGGAC GACGCGGCGGCGCTGTCGAGGGTGCACCGCGTCAAGGTGCAGCTCCCGGGCCTCCCCGCC GAGCTCGTCCGGAAGCTCCGGGACAAGGGCGTCGACTTCGCGGCGCACCCGGTGGAGCCC AGCGCCGGGGTGATGCTGCTCGACCTCCTCGTCAACTTCGGCTTCCCTCTCCTCTTCGTC GCCTCGCTCCTGTGGCGGTCGCCGACCATGAACAACCCCGGCGGCGGGCCTAGCCTCCCG TTCGGGCTCGGCAAGTCCAAGGCCAAGTTCCAGATGGAGCCCAAAACCGGCGTCACGTTC GACGACGTCGCCGGCGTGGACGAGGCCAAGCAGGACTTCCAGGAGATCGTCCAGTTCTTG AAGTTCCCGGAGAAGTTCACGGCGGTCGGTGCGAGGACCCCCAAGGGCGTGCTGCTGGTC GGCCCGCCGGGGACGGGGAAGACGCTGCTGGCCAAGGCGATCGCCGGCGAGGCCGGCGTG CCCTTCTTCTCGCTGTCCGGCTCCGAGTTCATCGAGATGTTCGTCGGCGTCGGCGCGTCG CGGGTGCGCGACCTGTTCGACAGGGCCAAGGCGAGCGCGCCGTGCCTCGTCTTCATCGAC GAGATCGACGCCGTGGGGCGGCAGCGCGGCGCGGGGATCGGCGGCGGGAACGACGAGAGG GAGCAGACGCTGAACCAGCTGCTCACCGAGATGGACGGGTTCGGCGGCGGCGACGGCGGC GTCGTCGTGATCGCCGCCACCAACCGGCCGGAGATCCTCGACGCGGCGCTGCTCCGGCCG GGGCGCTTCGACCGGCGGGTGTCCGTCGGCCTCCCCGACGTGCGCGGACGGGAGGAGATC CTCCTCGTGCACGGCGCCAACAAGCGGCTCGACCCCGGCGTGTCGCTCGCCGTGGTCGCC ATGCGCACGCCGGGGTTCAGCGGCGCCGACCTCGCCAACCTCATGAACGAGGCCGCCATC CTCGCCGGCCGCCGCGGCAAGGACCGCATCACCGTCAGCGAGATCGACGACTCCATCGAC CGCATCGTCGCCGGCCTCGAGGGCACCAGCATGACCGACGGCAAGAGCAAGATGCTCGTC GCCTACCATGAGATCGGCCACGCCGTGTGCGCGTAA

Peptide Sequence

PEP ID	Os06t0229066-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:6702956:6704431:-1 gene:Os06g0229066 transcript:Os06t0229066-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP-dependent zinc metalloprotease FTSH 6, chloroplastic. (Os06t0229066-00)
Sequence	MSPTAMSLTTTTSRLPICRAQGGGVAKEKRTTPPPAKITPPSSSSSEAAGLSRRRLLQSA GLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVD DAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVNFGFPLLFV ASLLWRSPTMNNPGGGPSLPFGLGKSKAKFQMEPKTGVTFDDVAGVDEAKQDFQEIVQFL KFPEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGAS RVRDLFDRAKASAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFGGGDGG VVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGREEILLVHGANKRLDPGVSLAVVA MRTPGFSGADLANLMNEAAILAGRRGKDRITVSEIDDSIDRIVAGLEGTSMTDGKSKMLV AYHEIGHAVCA

Transcript Sequence

Transcript ID	Os06t0229066-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6702956:6704431:-1 gene:Os06g0229066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATP-dependent zinc metalloprotease FTSH 6, chloroplastic. (Os06t0229066-00)
Sequence	ATGTCGCCGACGGCGATGTCGCTGACGACGACGACGAGCCGGCTGCCGATCTGCAGGGCG CAGGGCGGCGGCGTCGCCAAGGAGAAGCGGACGACGCCGCCACCTGCCAAGATCACGCCG CCTTCGTCGTCGTCGTCGGAGGCCGCCGGACTAAGCAGGAGGAGGCTGCTGCAATCGGCC GGCCTCGGGCTCGGCCTCGGCCTAACGGCGGCGAGGCCGGCGCGAGCCGAGGCGACGGCG CCGGAGGAGGTGACGTCGAACAGGATGTCCTACTCCCGGTTCCTGGAGTACCTCGACGCC GGCGCCGTCAAGAAGGTGGACTTCTTCGAGAACGGCACGGTGGCCGTCGCCGAGGTGGAC GACGCGGCGGCGCTGTCGAGGGTGCACCGCGTCAAGGTGCAGCTCCCGGGCCTCCCCGCC GAGCTCGTCCGGAAGCTCCGGGACAAGGGCGTCGACTTCGCGGCGCACCCGGTGGAGCCC AGCGCCGGGGTGATGCTGCTCGACCTCCTCGTCAACTTCGGCTTCCCTCTCCTCTTCGTC GCCTCGCTCCTGTGGCGGTCGCCGACCATGAACAACCCCGGCGGCGGGCCTAGCCTCCCG TTCGGGCTCGGCAAGTCCAAGGCCAAGTTCCAGATGGAGCCCAAAACCGGCGTCACGTTC GACGACGTCGCCGGCGTGGACGAGGCCAAGCAGGACTTCCAGGAGATCGTCCAGTTCTTG AAGTTCCCGGAGAAGTTCACGGCGGTCGGTGCGAGGACCCCCAAGGGCGTGCTGCTGGTC GGCCCGCCGGGGACGGGGAAGACGCTGCTGGCCAAGGCGATCGCCGGCGAGGCCGGCGTG CCCTTCTTCTCGCTGTCCGGCTCCGAGTTCATCGAGATGTTCGTCGGCGTCGGCGCGTCG CGGGTGCGCGACCTGTTCGACAGGGCCAAGGCGAGCGCGCCGTGCCTCGTCTTCATCGAC GAGATCGACGCCGTGGGGCGGCAGCGCGGCGCGGGGATCGGCGGCGGGAACGACGAGAGG GAGCAGACGCTGAACCAGCTGCTCACCGAGATGGACGGGTTCGGCGGCGGCGACGGCGGC GTCGTCGTGATCGCCGCCACCAACCGGCCGGAGATCCTCGACGCGGCGCTGCTCCGGCCG GGGCGCTTCGACCGGCGGGTGTCCGTCGGCCTCCCCGACGTGCGCGGACGGGAGGAGATC CTCCTCGTGCACGGCGCCAACAAGCGGCTCGACCCCGGCGTGTCGCTCGCCGTGGTCGCC ATGCGCACGCCGGGGTTCAGCGGCGCCGACCTCGCCAACCTCATGAACGAGGCCGCCATC CTCGCCGGCCGCCGCGGCAAGGACCGCATCACCGTCAGCGAGATCGACGACTCCATCGAC CGCATCGTCGCCGGCCTCGAGGGCACCAGCATGACCGACGGCAAGAGCAAGATGCTCGTC GCCTACCATGAGATCGGCCACGCCGTGTGCGCGTAA