Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0228950-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:6699725:6700782:1 gene:Os06g0228950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant regulator RWP-RK domain containing protein. (Os06t0228950-00)
Sequence

ATGGAGCCCAGCCAAGAACATAGCTGGTGGCCTTATTGTACTAGCCTTTGGCCTGATAGT
TACCTGCTTGAGGAGGAAGCGCTCTTCTCCAGTCTTTCCTTCCCGAGCTTTCATCCCCAG
CCAGTCTACTCTACTGTCATGCAAAGCAACGTTTTACAAGACGAGCTTGGTGTCATCTTT
GAAGATGATGTGCTGAAGTATTGGGATGAGATGGAGCAATCGGAGAACAAGGTAGAGAAA
AGTGAGAAGGGATTGCCACTGCTCTATTACGGTGATGAGAACGGAGCAGCCTCCAAGATC
ATGAGAGACGATGTTAGATCAGAGGAGAAGGCATTGACGTTCGAGCTCGTGTCCCAGTAC
TTCTACATGCCGATCACGCAGGCGGCACGAGAGCTGAATGTTGGGCTCACCCTCCTGAAG
AAGAAGTGCAGAGAGCTGGGCATTCCAAGGTGGCCACACCGCAAGATGAAAAGCTTGCAG
ACACTCATCAACAATGTACAGGTCCTTCAGGAAGCCAGCAAGGCGAACAATGAGGAGCAG
CTGAGGATGCTGGTAGAGATGCTGCAGGAGGAGAGGAGGCTCCTGGAGCAGAAGCCGTAT
GTTCAGCTCGAGGAGAAGACGAAGAGGCTCAGGCAGGCCTGCTTCAAGGCCAACTACAAG
AAGAGGCGCCTCTTGGCTCTTGAAGCTGGGGAGCCGTGA

Peptide Sequence

PEP ID

Os06t0228950-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:6699725:6700782:1 gene:Os06g0228950 transcript:Os06t0228950-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant regulator RWP-RK domain containing protein. (Os06t0228950-00)
Sequence

MEPSQEHSWWPYCTSLWPDSYLLEEEALFSSLSFPSFHPQPVYSTVMQSNVLQDELGVIF
EDDVLKYWDEMEQSENKVEKSEKGLPLLYYGDENGAASKIMRDDVRSEEKALTFELVSQY
FYMPITQAARELNVGLTLLKKKCRELGIPRWPHRKMKSLQTLINNVQVLQEASKANNEEQ
LRMLVEMLQEERRLLEQKPYVQLEEKTKRLRQACFKANYKKRRLLALEAGEP

Transcript Sequence

Transcript ID

Os06t0228950-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6699725:6700782:1 gene:Os06g0228950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant regulator RWP-RK domain containing protein. (Os06t0228950-00)
Sequence

ATGGAGCCCAGCCAAGAACATAGCTGGTGGCCTTATTGTACTAGCCTTTGGCCTGATAGT
TACCTGCTTGAGGAGGAAGCGCTCTTCTCCAGTCTTTCCTTCCCGAGCTTTCATCCCCAG
CCAGTCTACTCTACTGTCATGCAAAGCAACGTTTTACAAGACGAGCTTGGTGTCATCTTT
GAAGATGATGTGCTGAAGTATTGGGATGAGATGGAGCAATCGGAGAACAAGGTAGAGAAA
AGTGAGAAGGGATTGCCACTGCTCTATTACGGTGATGAGAACGGAGCAGCCTCCAAGATC
ATGAGAGACGATGTTAGATCAGAGGAGAAGGCATTGACGTTCGAGCTCGTGTCCCAGTAC
TTCTACATGCCGATCACGCAGGCGGCACGAGAGCTGAATGTTGGGCTCACCCTCCTGAAG
AAGAAGTGCAGAGAGCTGGGCATTCCAAGGTGGCCACACCGCAAGATGAAAAGCTTGCAG
ACACTCATCAACAATGTACAGGTCCTTCAGGAAGCCAGCAAGGCGAACAATGAGGAGCAG
CTGAGGATGCTGGTAGAGATGCTGCAGGAGGAGAGGAGGCTCCTGGAGCAGAAGCCGTAT
GTTCAGCTCGAGGAGAAGACGAAGAGGCTCAGGCAGGCCTGCTTCAAGGCCAACTACAAG
AAGAGGCGCCTCTTGGCTCTTGAAGCTGGGGAGCCGTGA