Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0228600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6682437:6685947:-1 gene:Os06g0228600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12C, amino acid permease 2, amino acid/auxin permease 2 description:Similar to Amino acid carrier. (Os06t0228600-01)
Sequence	ATGGCGTCGGTCGACTTGGAGCTGGGGCGACCTCTGTCGGCGGCGGCGGCGGCGTACCCT CCTCCGCTGCGGCGGAGCATCAACGACGACGACGTTGACGACGACGGGAAGCCCAAGCGA ACAGGAACGGAGTGGACGGCGAGCGCGCACATCGTCACGGCGGTGGTCGGCTCCGGCGTG CTGTCGCTGGCATGGTCCACGGCGCAGCTCGGCTGGGTCGCCGGCCCGGCCACCCTCGTC GTGTTCGCGGTCATCACCTACTACACCTCCGTGCTCCTCGCCGACTGCTACCGCGCCGGC GGCGATCAGGTCTCCGGGAAGAGGAACTACACATACATGGACGCCGTCGAGTCCTATCTA GGTGGTCGGCAAGTGTGGTTCTGTGGTCTCTGTCAGTACGTTAACCTGGTTGGAACTGCA ATCGGGTACACCATCACAGCATCCATCAGTGCCGCGGCGGTGTACAAGTCCAACTGCTTC CACAAGAACGGCCACTCCGCCGACTGCAGCGTCTTCACCACCTCGTACATGGTGGTGTTC GGCGTTGTCCAGGTCTTCTTCTCCCAGCTGCAGAGCCTCCACGAGGTGGCGTGGCTGTCC GTGCTCGCCGCCGTCATGTCCTTCTCCTACTCGGCCATCGCCGTCGGCCTCTCCTTGGCA CAAACCATATCAGGTCCTACTGGTATGACGACTATGTCTGGGACTGTAATCGGAATAGAT GTTGATTTGTCGCACAAGATATGGCAGGCACTGCAAGCCCTCGGAAACATCGCGTTCGCA TATTCCTACTCCCTGGTTCTCATTGAAATCCAGGACACGATCAGGTCGCCGCCGGCGGAG AGCAAGACGATGAGGAAGGCGAACGCGCTGGCCATGCCGGTGATCACGGCGTTCTACACG CTCTGCGGCTGCCTCGGCTACGCGGCGTTCGGGAACGCGGCGCCGGGGAACATGCTCACG GGCTTCGGCTTCTACGACCCCTACTGGCTCGTCGGCCTCGCCAACGCCTGCATCGTCGTG CACCTCGTCGGCGCCTACCAGGTGATGTCCCAGCCCGTCTTCACCGCCGTCGAGTCCTGG GCGTCCTCCCGGTGGCCCCGGTGCGGCTTCTTCGTCACCGGCGGCGGCGGAACGAGGCTG ATCAGCGTGAACGCGTTCAGGCTCGCGTGGCGCACGGCGTACGTCGTGGCGTGCACCGCG GTCGCCGCCGTGGTGCCGTTCTTCAACGACGTGCTCGGCCTCCTCGGCGCCGTCGGGTTC TGGCCGCTCACCGTGTACTTCCCCGTGGAGATGTACATCCGGCGGCGGAAGCTGGAGAGG TCGTCCAAGAGGTGGGTGGCGCTGCAGAGCCTCAACGCCGTGTGCTTCGTGGTGACGCTC GCCTCAGCGGTCGCGTCCGTGCAGGGGATCGCCGAATCGATGGCGCACTATGTACCGTTC AAGTCAAAGTTGTAA

Peptide Sequence

PEP ID	Os06t0228600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6682437:6685947:-1 gene:Os06g0228600 transcript:Os06t0228600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12C, amino acid permease 2, amino acid/auxin permease 2 description:Similar to Amino acid carrier. (Os06t0228600-01)
Sequence	MASVDLELGRPLSAAAAAYPPPLRRSINDDDVDDDGKPKRTGTEWTASAHIVTAVVGSGV LSLAWSTAQLGWVAGPATLVVFAVITYYTSVLLADCYRAGGDQVSGKRNYTYMDAVESYL GGRQVWFCGLCQYVNLVGTAIGYTITASISAAAVYKSNCFHKNGHSADCSVFTTSYMVVF GVVQVFFSQLQSLHEVAWLSVLAAVMSFSYSAIAVGLSLAQTISGPTGMTTMSGTVIGID VDLSHKIWQALQALGNIAFAYSYSLVLIEIQDTIRSPPAESKTMRKANALAMPVITAFYT LCGCLGYAAFGNAAPGNMLTGFGFYDPYWLVGLANACIVVHLVGAYQVMSQPVFTAVESW ASSRWPRCGFFVTGGGGTRLISVNAFRLAWRTAYVVACTAVAAVVPFFNDVLGLLGAVGF WPLTVYFPVEMYIRRRKLERSSKRWVALQSLNAVCFVVTLASAVASVQGIAESMAHYVPF KSKL

Transcript Sequence

Transcript ID	Os06t0228600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6682437:6685947:-1 gene:Os06g0228600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12C, amino acid permease 2, amino acid/auxin permease 2 description:Similar to Amino acid carrier. (Os06t0228600-01)
Sequence	GAGATGATGCAGTCGTCCATAGTAGTATAACACAGCTAGCAACTCGCTTAAAAAGGCGAG GACGCGCGCGTAGACGACGGAGCGATCGATCGCCGCCGATCGGCTTGGCTGAAGGCGAGA AGGTAGGGATGGCGTCGGTCGACTTGGAGCTGGGGCGACCTCTGTCGGCGGCGGCGGCGG CGTACCCTCCTCCGCTGCGGCGGAGCATCAACGACGACGACGTTGACGACGACGGGAAGC CCAAGCGAACAGGAACGGAGTGGACGGCGAGCGCGCACATCGTCACGGCGGTGGTCGGCT CCGGCGTGCTGTCGCTGGCATGGTCCACGGCGCAGCTCGGCTGGGTCGCCGGCCCGGCCA CCCTCGTCGTGTTCGCGGTCATCACCTACTACACCTCCGTGCTCCTCGCCGACTGCTACC GCGCCGGCGGCGATCAGGTCTCCGGGAAGAGGAACTACACATACATGGACGCCGTCGAGT CCTATCTAGGTGGTCGGCAAGTGTGGTTCTGTGGTCTCTGTCAGTACGTTAACCTGGTTG GAACTGCAATCGGGTACACCATCACAGCATCCATCAGTGCCGCGGCGGTGTACAAGTCCA ACTGCTTCCACAAGAACGGCCACTCCGCCGACTGCAGCGTCTTCACCACCTCGTACATGG TGGTGTTCGGCGTTGTCCAGGTCTTCTTCTCCCAGCTGCAGAGCCTCCACGAGGTGGCGT GGCTGTCCGTGCTCGCCGCCGTCATGTCCTTCTCCTACTCGGCCATCGCCGTCGGCCTCT CCTTGGCACAAACCATATCAGGTCCTACTGGTATGACGACTATGTCTGGGACTGTAATCG GAATAGATGTTGATTTGTCGCACAAGATATGGCAGGCACTGCAAGCCCTCGGAAACATCG CGTTCGCATATTCCTACTCCCTGGTTCTCATTGAAATCCAGGACACGATCAGGTCGCCGC CGGCGGAGAGCAAGACGATGAGGAAGGCGAACGCGCTGGCCATGCCGGTGATCACGGCGT TCTACACGCTCTGCGGCTGCCTCGGCTACGCGGCGTTCGGGAACGCGGCGCCGGGGAACA TGCTCACGGGCTTCGGCTTCTACGACCCCTACTGGCTCGTCGGCCTCGCCAACGCCTGCA TCGTCGTGCACCTCGTCGGCGCCTACCAGGTGATGTCCCAGCCCGTCTTCACCGCCGTCG AGTCCTGGGCGTCCTCCCGGTGGCCCCGGTGCGGCTTCTTCGTCACCGGCGGCGGCGGAA CGAGGCTGATCAGCGTGAACGCGTTCAGGCTCGCGTGGCGCACGGCGTACGTCGTGGCGT GCACCGCGGTCGCCGCCGTGGTGCCGTTCTTCAACGACGTGCTCGGCCTCCTCGGCGCCG TCGGGTTCTGGCCGCTCACCGTGTACTTCCCCGTGGAGATGTACATCCGGCGGCGGAAGC TGGAGAGGTCGTCCAAGAGGTGGGTGGCGCTGCAGAGCCTCAACGCCGTGTGCTTCGTGG TGACGCTCGCCTCAGCGGTCGCGTCCGTGCAGGGGATCGCCGAATCGATGGCGCACTATG TACCGTTCAAGTCAAAGTTGTAAAGGAAAAAAAAAAGAACGGTCTATGCACCATTTGCTG TTAACCTGATAGGAATGTGACCGTACGAGTACTTTGAGATTCATGCTGGACAACAAAACC CAAAGAGAGTTGCTACAAAACAGGATCCCGTTGCAACGGGATAGAC