Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0228200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6648404:6653002:-1 gene:Os06g0228200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 6 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Water transport (Os06t0228200-01);Similar to NOD26-like membrane integral protein. (Os06t0228200-03)
Sequence	ATGGCATCGACGACAGCGCCGTCGAGGACCAACTCTCGGGTGAACTACTCGAACGAGATC CATGACCTCTCCACCGTGCAGAGCGTCTCCGCCGTCCCCAGCGTCTACTACCCCGAGAAA TCCTTCGCCGACATCTTCCCTCCTAACCTCCTCAAGAAGGTGATATCGGAGGTGGTGGCG ACGTTCCTGCTTGTGTTCGTGACGTGCGGGGCGGCGTCCATCTACGGCGAGGACATGAAG CGCATCTCGCAGCTGGGGCAGTCGGTGGTCGGTGGCCTCATCGTCACCGTCATGATCTAC GCCACCGGCCACATCTCCGGCGCCCACATGAACCCGGCCGTCACCCTCTCCTTCGCCTTC TTCCGGCATTTCCCCTGGATTCAGGTGCCGTTCTACTGGGCGGCGCAGTTCACGGGGGCG ATGTGCGCGGCGTTCGTGCTGCGGGCGGTGCTGTACCCGATCGAGGTGTTGGGGACGACG ACGCCGACGGGGCCGCACTGGCACGCCCTCGTCATCGAGATCGTCGTCACCTTCAACATG ATGTTCGTCACCTGCGCCGTTGCCACCGACTCCAGAGCGGTGGGTGAGTTGGCGGGGTTA GCAGTCGGTTCCGCGGTTTGCATTACGTCGATCTTCGCAGGGCCGGTGTCAGGAGGATCG ATGAACCCGGCGAGGACGCTGGCGCCGGCGGTGGCCAGCAACGTCTACACCGGCCTCTGG ATCTACTTCCTCGGCCCCGTCGTCGGCACCCTCTCCGGCGCATGGGTCTACACCTACATC CGCTTCGAGGAGGCCCCCGCCGCCGCCGGCGGCGCCGCCCCCCAGAAGCTCTCCTCCTTC AAGCTCCGCCGCTTGCAGAGCCAGTCCATGGCCGCCGACGAGTTCGACAACGTCTAA

Peptide Sequence

PEP ID	Os06t0228200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6648404:6653002:-1 gene:Os06g0228200 transcript:Os06t0228200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 6 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Water transport (Os06t0228200-01);Similar to NOD26-like membrane integral protein. (Os06t0228200-03)
Sequence	MASTTAPSRTNSRVNYSNEIHDLSTVQSVSAVPSVYYPEKSFADIFPPNLLKKVISEVVA TFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLIVTVMIYATGHISGAHMNPAVTLSFAF FRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTGPHWHALVIEIVVTFNM MFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLW IYFLGPVVGTLSGAWVYTYIRFEEAPAAAGGAAPQKLSSFKLRRLQSQSMAADEFDNV

Transcript Sequence

Transcript ID	Os06t0228200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6648404:6653002:-1 gene:Os06g0228200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 6 description:Aquaporin NIP III subfamily protein, Aquaporin, Silicon influx transporter, Water transport (Os06t0228200-01);Similar to NOD26-like membrane integral protein. (Os06t0228200-03)
Sequence	GAGACCAGGGCAAGCAGCAGTAGCAAAGCAGAAGCAGAGGCAGAGGCAGCACAGCTTGAT CGTTCTTCCATCGATCGATCGGCAGCTAGCGCTCACAGTACTCTCGATCGCTCGCTCGCG CTGGTCCGTTGATTCGTTGTCCTAGATAGATAGCTAAAGGGGGGCCATGGCATCGACGAC AGCGCCGTCGAGGACCAACTCTCGGGTGAACTACTCGAACGAGATCCATGACCTCTCCAC CGTGCAGAGCGTCTCCGCCGTCCCCAGCGTCTACTACCCCGAGAAATCCTTCGCCGACAT CTTCCCTCCTAACCTCCTCAAGAAGGTGATATCGGAGGTGGTGGCGACGTTCCTGCTTGT GTTCGTGACGTGCGGGGCGGCGTCCATCTACGGCGAGGACATGAAGCGCATCTCGCAGCT GGGGCAGTCGGTGGTCGGTGGCCTCATCGTCACCGTCATGATCTACGCCACCGGCCACAT CTCCGGCGCCCACATGAACCCGGCCGTCACCCTCTCCTTCGCCTTCTTCCGGCATTTCCC CTGGATTCAGGTGCCGTTCTACTGGGCGGCGCAGTTCACGGGGGCGATGTGCGCGGCGTT CGTGCTGCGGGCGGTGCTGTACCCGATCGAGGTGTTGGGGACGACGACGCCGACGGGGCC GCACTGGCACGCCCTCGTCATCGAGATCGTCGTCACCTTCAACATGATGTTCGTCACCTG CGCCGTTGCCACCGACTCCAGAGCGGTGGGTGAGTTGGCGGGGTTAGCAGTCGGTTCCGC GGTTTGCATTACGTCGATCTTCGCAGGGCCGGTGTCAGGAGGATCGATGAACCCGGCGAG GACGCTGGCGCCGGCGGTGGCCAGCAACGTCTACACCGGCCTCTGGATCTACTTCCTCGG CCCCGTCGTCGGCACCCTCTCCGGCGCATGGGTCTACACCTACATCCGCTTCGAGGAGGC CCCCGCCGCCGCCGGCGGCGCCGCCCCCCAGAAGCTCTCCTCCTTCAAGCTCCGCCGCTT GCAGAGCCAGTCCATGGCCGCCGACGAGTTCGACAACGTCTAATCGCCCTGACGCCATGG ACCCACACCGTACTGCTATACTGTATACGTATATACATATGTATGTATGTACTGCACGCG TACGTACGTACGCACGTGCACGAGCGCGGGAAGCCATTGTTTGTACGATCGACGACTCTA CCAAGTCGAAATGTAATGTGTACGGTGTCTGTGTACGTGTGGTGGTGCTGTGTGTACGTG GGCCCGCTCTGCTTGAAGAAGAAGAGAGAGCTTGAGCTAGCTATACGTGTATACATGTAC CGTGTACTATACGTACGTGCGTATTTGTCTTTTTTTTTTCCTCTCTTCCCTGCGCCTACG TGCGTATGTACGTACGCTTTCTCTCGCTGGTATAATCAGCTGGCGATCGATAGCGGCAAA AATATGTTATGTGTTCGTGTCAGTCTCTTTGGCTTTGTATTAAAAATCAATCTGAGTTAA TGAAGGAGCTGAGCTTTGCTTGTC