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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0226600-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:6559760:6563305:-1 gene:Os06g0226600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-01);TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-02)
Sequence

ATGGGGTCTGGATCTTTCCTCAAGCTGCTGGCCAACAACTTCGACGTCCTCGCCGGGCCA
TTAGTTTCACTTGCTTATCCATTATATGCCTCTGTGAGAGCAATAGAAACAAAATCTCCT
GTTGATGATCAGCAATGGCTCACTTACTGGGTGCTGTACTCGTTTATCACTTTGTTTGAG
CTTACTTTTGCTCCAGTAATTGAATGGCTTCCTTTTTGGTCCTATGCAAAGTTGTTCTTC
AACTGCTGGTTGGTCTTACCTTGCTTCCATGGTGCTGCTTATGTTTATGATCACTTTGTG
CGGCCAATGTTTGTGAATCGTCAAATAGTAAATGTCTGGTATGTTCCAAGAAAAGAAAAC
CTGAGTAAACCTGATGATGTGCTATCAGCTGCGGAGAGATATATTGAACAGAATGGACCA
GAAGCATTTGAGAAACTCATCAGCAAGTCTACGAGGCCTTCAACCTCCAAAAGAAGCACA
AAGCAATCTATCTTGGAGGAGGTAGAATCTGAACACATGGCCAGGGCTGAAAGAGAATCA
TGGGGCGAAAATCCATTCTATGATAAAAATTATCGATGCTAG

Peptide Sequence

PEP ID

Os06t0226600-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:6559760:6563305:-1 gene:Os06g0226600 transcript:Os06t0226600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-01);TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-02)
Sequence

MGSGSFLKLLANNFDVLAGPLVSLAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITLFE
LTFAPVIEWLPFWSYAKLFFNCWLVLPCFHGAAYVYDHFVRPMFVNRQIVNVWYVPRKEN
LSKPDDVLSAAERYIEQNGPEAFEKLISKSTRPSTSKRSTKQSILEEVESEHMARAERES
WGENPFYDKNYRC

Transcript Sequence

Transcript ID

Os06t0226600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6559760:6563305:-1 gene:Os06g0226600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-01);TB2/DP1 and HVA22 related protein family protein. (Os06t0226600-02)
Sequence

GAGCAACGGCTCTCCACTACTAGCCCACAGCTCCCAAGAATCTCTGCCATTTCTTGAGCT
GGTCGATCCATCGGGGAGGGAGAGAGGTCGAGGAGGCGGCGGAAGGGGAGAGGATGGGGT
CTGGATCTTTCCTCAAGCTGCTGGCCAACAACTTCGACGTCCTCGCCGGGCCATTAGTTT
CACTTGCTTATCCATTATATGCCTCTGTGAGAGCAATAGAAACAAAATCTCCTGTTGATG
ATCAGCAATGGCTCACTTACTGGGTGCTGTACTCGTTTATCACTTTGTTTGAGCTTACTT
TTGCTCCAGTAATTGAATGGCTTCCTTTTTGGTCCTATGCAAAGTTGTTCTTCAACTGCT
GGTTGGTCTTACCTTGCTTCCATGGTGCTGCTTATGTTTATGATCACTTTGTGCGGCCAA
TGTTTGTGAATCGTCAAATAGTAAATGTCTGGTATGTTCCAAGAAAAGAAAACCTGAGTA
AACCTGATGATGTGCTATCAGCTGCGGAGAGATATATTGAACAGAATGGACCAGAAGCAT
TTGAGAAACTCATCAGCAAGTCTACGAGGCCTTCAACCTCCAAAAGAAGCACAAAGCAAT
CTATCTTGGAGGAGGTAGAATCTGAACACATGGCCAGGGCTGAAAGAGAATCATGGGGCG
AAAATCCATTCTATGATAAAAATTATCGATGCTAGAACAATCTGTTGTTCACGACCACAT
ACTCATCAGGTTGCCGGCTTATCTGGGTTGAGGATAAAGCTTTCCATGTATCTGACTTCA
GGATTTGTACTTTGATGCATCATGCATCCACTGAATGTCATTCAGTCCCAGTTCCCAGAA
CCAATTGTGCATTGGCTGAACTATTGTAAATAGGTGCTAGTGTTGACAATATCCCTTAGT
TCTTAAATGATGTTATGTAATTCTGTTAATCTGCCTTGCGTGGTAGTGACAACCTCTGGA
CTTGGTTGGCAGTTATATTTTTCCCTTCTTGGAGAAGGGCCAGAATTCAAAAATAGTCCT
GATATCTATATTCTACTGCTTGCAAGGCAGAGGAGCTGTTGACATCCCCTGC