Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0226500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6556697:6557748:1 gene:Os06g0226500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRASSINOSTEROID UPREGULATED 1 description:Helix-loop-helix protein, Brassinosteroid signaling (Os06t0226500-01)
Sequence

ATGTCGAGCCGGAGGTCGTCGCGCTCCTCCGTGTCGGAGGAGGAGATCAACGAGCTCATC
TCCAAGCTCCAGTCCCTCCTCCCCAGCTCCCGCCGCCGCGGCGCCAACCAGGCGTCGACG
ACGAAGCTGCTGAAGGAGACGTGCAGCTACATCAAGAGCCTGCACCGGGAGGTGGACGAC
CTCAGCGACAGGCTCTCCGACCTCATGGCCGGCATGGATCACAACAGCCCAGGCGCCGAG
ATCATCCGCAGCCTCCTCCGCTAG

Peptide Sequence

PEP ID

Os06t0226500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6556697:6557748:1 gene:Os06g0226500 transcript:Os06t0226500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRASSINOSTEROID UPREGULATED 1 description:Helix-loop-helix protein, Brassinosteroid signaling (Os06t0226500-01)
Sequence

MSSRRSSRSSVSEEEINELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDD
LSDRLSDLMAGMDHNSPGAEIIRSLLR

Transcript Sequence

Transcript ID

Os06t0226500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6556697:6557748:1 gene:Os06g0226500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRASSINOSTEROID UPREGULATED 1 description:Helix-loop-helix protein, Brassinosteroid signaling (Os06t0226500-01)
Sequence

AATTCCTACCTCACACTTCTGCAACAAGCTTTAGCTCCAGCCACCGGAACGAGAGATCGA
TACAGCTCGATCAGCTAGCCGCATTCGCCCTCGCCGCCGCCGACGATGTCGAGCCGGAGG
TCGTCGCGCTCCTCCGTGTCGGAGGAGGAGATCAACGAGCTCATCTCCAAGCTCCAGTCC
CTCCTCCCCAGCTCCCGCCGCCGCGGCGCCAACCAGGCGTCGACGACGAAGCTGCTGAAG
GAGACGTGCAGCTACATCAAGAGCCTGCACCGGGAGGTGGACGACCTCAGCGACAGGCTC
TCCGACCTCATGGCCGGCATGGATCACAACAGCCCAGGCGCCGAGATCATCCGCAGCCTC
CTCCGCTAGCTCATCTCTTCTCATCTGTTCTTCCTCCTCGATGATCGATCGATCTCGTGT
TATTCTACGTACATGAAGGATGATATGAATGCAGCTCGTGCCCTGTAGCTACGTATAAAT
ATACACATATGTATACATGCATACAGTACATGATATGCATATGCCTAGATCTGATCTAGC
TCAGTAGAAAATCTACTCATCTCGGTGTACTACTGATGATGATGATGATTAAGGCATGCA
GCTGGCTTGATGATCGGTACTACTACTACTACTTCACTTCAGTTCAGTAGGGGCATTAGC
TAGCTAGCTAGGGCCGGCTGCCTAATTAAGTAATTAAGTAATTTATTATTTGTAGTAGCC
AGCTTGATCTCATCTCTCCTCATGAGCCATATGACATGTGGTTAAGTTAATTAATCCTTG
ATGCAGTAGAGTCGTCCC