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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0225000-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:6475161:6479028:1 gene:Os06g0225000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAR1B-like gene, secretion-associated Ras-superfamily protein 1, ARF-like protein 1c description:Similar to NTGB3 (Fragment). (Os06t0225000-00)
Sequence

ATGTCGTTTCTGCTGGATTGGTTCTACGACGTGCTGGCGTCGATCGGGCTGTGGCAGAAG
GAGGCCAAGATCCTCTTCCTCGGCCTCGACAACGCCGGCAAAACCACCCTCTTCTACATG
CTCTCACAAGAGAATCTGGCGGTGCACCAGCCGACGCAGCACCCGACGTCGGAGGAGCTG
AGCATCGGGCGGATCAGGTTCAAGGCGTTCGACCTCGGCGGCCACCGGATCGCTCGCCGC
GTCTGGAGGGACTACTACGCCCAGGTTGATGCAGTAGTTTACGTGGTGGACGCTGCCGAC
AGGTGCCGGTTCGCCGAGTCGAAGATGGAGCTGGACGCCCTCCTGTCTGACGACGCGCTC
GCTGGCGTGCCGTTCCTCGTCCTCGGGAACAAGATAGACATCCCGTACGCGGTGCCCGAG
CAGGAGCTGTGCTACTACCTCGGGCTCACCGGCCTCACCACCGGCAAGGGCAATGTCAAC
CTTGCAGGAACCGGAGTGCGGCCGGTCGAGGTCTTCATGTGCAGCGTCGTCCGCCGGATG
GGCTACGGCGATGGCTTCAGGTGGATGTCACAGTACATCAAGTAG

Peptide Sequence

PEP ID

Os06t0225000-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:6475161:6479028:1 gene:Os06g0225000 transcript:Os06t0225000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAR1B-like gene, secretion-associated Ras-superfamily protein 1, ARF-like protein 1c description:Similar to NTGB3 (Fragment). (Os06t0225000-00)
Sequence

MSFLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEEL
SIGRIRFKAFDLGGHRIARRVWRDYYAQVDAVVYVVDAADRCRFAESKMELDALLSDDAL
AGVPFLVLGNKIDIPYAVPEQELCYYLGLTGLTTGKGNVNLAGTGVRPVEVFMCSVVRRM
GYGDGFRWMSQYIK

Transcript Sequence

Transcript ID

Os06t0225000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6475161:6479028:1 gene:Os06g0225000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAR1B-like gene, secretion-associated Ras-superfamily protein 1, ARF-like protein 1c description:Similar to NTGB3 (Fragment). (Os06t0225000-00)
Sequence

ATCAAATCAACAACAGGAAGAAGAGAAGAAGAACATAACATACCTGGAGATGTCGTTTCT
GCTGGATTGGTTCTACGACGTGCTGGCGTCGATCGGGCTGTGGCAGAAGGAGGCCAAGAT
CCTCTTCCTCGGCCTCGACAACGCCGGCAAAACCACCCTCTTCTACATGCTCTCACAAGA
GAATCTGGCGGTGCACCAGCCGACGCAGCACCCGACGTCGGAGGAGCTGAGCATCGGGCG
GATCAGGTTCAAGGCGTTCGACCTCGGCGGCCACCGGATCGCTCGCCGCGTCTGGAGGGA
CTACTACGCCCAGGTTGATGCAGTAGTTTACGTGGTGGACGCTGCCGACAGGTGCCGGTT
CGCCGAGTCGAAGATGGAGCTGGACGCCCTCCTGTCTGACGACGCGCTCGCTGGCGTGCC
GTTCCTCGTCCTCGGGAACAAGATAGACATCCCGTACGCGGTGCCCGAGCAGGAGCTGTG
CTACTACCTCGGGCTCACCGGCCTCACCACCGGCAAGGGCAATGTCAACCTTGCAGGAAC
CGGAGTGCGGCCGGTCGAGGTCTTCATGTGCAGCGTCGTCCGCCGGATGGGCTACGGCGA
TGGCTTCAGGTGGATGTCACAGTACATCAAGTAGAACATGGTAGAGACTCAGAGCATGTA
TCTATATGCCTCTTGTATCAATTAATCAAGACATTTCATATGA