Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0224200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6440527:6447606:-1 gene:Os06g0224200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRX-like protein 12, glutaredoxin-like protein 12 description:Thioredoxin fold domain containing protein. (Os06t0224200-01)
Sequence	ATGGAGAATGGAGACAAGGATGAGAAAAATGTTGCTGTCACGGAAGGATCTACCAATTCT GAAGAAAAGGATCAAGATGAGGATTTGTTGAGGAGAACAGAAATGCTGAATGCAAAAGAA GCAATAAATTCTTCAAATGAGAATTCAGGCAATGATTCAGAAGCACAGATCCATGTGAGA GATGATTCACAAAAAGAATTCAATGAGAAGATGAATAAAGAAGGAAGCTCAGATCCAATG GAACCTACAGATTCAAGCCAGACAGAGGAAGATATCCTTGCTGAAGACAAATCTGAAGAA CCTGTTTTTGATGGAACTGAGGTTGCTGAAATGGAAGATTTGAGGCGTTCGTCCAATCAA TCTGTGGAACTTGATTCAGATGCCCATGGGTCTGTACTCAATGAAAGAGCTACTGCAATC AAGAATTTTGTTAAGGAAAAGGGTGCCATTGCAGTTTCAACATTTATAAGGCGCCTTTCT GGCAAAAAGGACGAAAATGAATTTTCTGTTGAAGATGAAAAGAATGAAGGATCAGAAAGC ATCAGTAGTGGCAATATTGGCTCAGATGCTGAACCTAAATCAAAAGAGGTGCAGCCCAAA TCTGAGGAGAGAACTACATGGAATCCACTCAACTTGATTAAAATCGGACGAGATTTTGAT ACCTTCATGACTGGGGAAGCTGGGCATGAAAATGTGCCAGATTTGATAGAGCAACCAACA GGGAAGGGAAGAATTATTATATACACAAAACTGGGTTGTGAAGATTGCAAAATGGTTCGC TCATTCATGCGTCAGAAAATGCTCAAGTATGTTGAGATCAACATCGACATATTCCCCAGT AGAAAGATGGAACTAGAAAATAATACTGGGTCATCCACAGTACCAAAAGTGTATTTCAAT GACTTGCTGATTGGAGGGTTAACTGAATTGAAGAAAATGGAGGAGTCTGGCATTCTTGAT GACAGAACTGATGCTCTTTTCAAAGATGAACCCTCATCTGCTGCTCCGTTGCCTCCCTTA CCTGGAGAAGATGATGAATCTGGTAGTGGGAAGATAGATGAGTTGGCAACCATTGTCAGA AAAATGAGAGAGTCAATCACTCTGAAGGATAGATTTTACAAAATGAGAAGATTTAGCAGC TGCTTTCTTGGTAGTGAAGCTGTAGATTTCTTATCAGAAGATCAATATTTAGAGAGAGAT GAGGCGGTGGAATTTGGAAGAAAGCTTGCAAGCAAATATTTCTATCGCCATGTTTTAGAC GAAGATGTATTTGAAGATGGAAATCACTTGTATCGCTTCCTGGATAATGATCCCATAATT ATGAGCCAGTGCTACAACATCCCTAAGGGTATCATTGATGTTGAACCGAAACCAATTGTT GAAGTGGCATCAAGGTTAAGAAAGTTGTCTGAAACCATGTTTGAAGCTTATGTATCTGAA GATGGTAAACATGTTGACTACAGAAGCATCCAGGGTTGTGAAGAATTTAAAAGGTATGTT AGAACAACTGAGGAGCTCCAGAGGGTGGAAACCCATGAGTTATCACGGGAAGAAAAGCTC GCTTTCTTCATAAATCTCTACAATATGATGGCTATCCATGCATTAGTGACATGTGGTCAT CCTGCTGGACCATTGGACAGGAGAAAGTTCTTTGGAGATTTTAAGTATGTCATTGGTGGA TGTGCTTATTCAATGTCAGCTATTCAAAATGGCATACTGCGTGGTAACCAAAGGCCACCA TACAACCTTGCCAAGCCTTTTGGACAGAAAGACCAAAGATCCAAGGTGGCCCTTCCATAT GCTGAACCTCTTGTTCACTTTGCTTTGGTATGTGGGACCAAATCTGGACCTGCACTTAGG TGTTACTCGCCAGGAAACATCGATAAAGAACTGGTGGAAGCTGCACGTGATTTCCTAAGA AATGTAGGAATTGTTGTTGATCCTGAAGCCAAGGTTGCATCTGTAAGCAAGATTTTGCGA TGGTATAGCACAGACTTTGGTAAGAACGAGACGGAAGTGCTGAAGCATGCGGCAAATTAT CTGGAACCAGCAGAGTCGGAGCAATTCTTGGAACTACTTGCGAACACTCAACTGAAAGTC TTGTATCAACCCTATGACTGGAGCTTAAACATTTAG

Peptide Sequence

PEP ID	Os06t0224200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6440527:6447606:-1 gene:Os06g0224200 transcript:Os06t0224200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRX-like protein 12, glutaredoxin-like protein 12 description:Thioredoxin fold domain containing protein. (Os06t0224200-01)
Sequence	MENGDKDEKNVAVTEGSTNSEEKDQDEDLLRRTEMLNAKEAINSSNENSGNDSEAQIHVR DDSQKEFNEKMNKEGSSDPMEPTDSSQTEEDILAEDKSEEPVFDGTEVAEMEDLRRSSNQ SVELDSDAHGSVLNERATAIKNFVKEKGAIAVSTFIRRLSGKKDENEFSVEDEKNEGSES ISSGNIGSDAEPKSKEVQPKSEERTTWNPLNLIKIGRDFDTFMTGEAGHENVPDLIEQPT GKGRIIIYTKLGCEDCKMVRSFMRQKMLKYVEINIDIFPSRKMELENNTGSSTVPKVYFN DLLIGGLTELKKMEESGILDDRTDALFKDEPSSAAPLPPLPGEDDESGSGKIDELATIVR KMRESITLKDRFYKMRRFSSCFLGSEAVDFLSEDQYLERDEAVEFGRKLASKYFYRHVLD EDVFEDGNHLYRFLDNDPIIMSQCYNIPKGIIDVEPKPIVEVASRLRKLSETMFEAYVSE DGKHVDYRSIQGCEEFKRYVRTTEELQRVETHELSREEKLAFFINLYNMMAIHALVTCGH PAGPLDRRKFFGDFKYVIGGCAYSMSAIQNGILRGNQRPPYNLAKPFGQKDQRSKVALPY AEPLVHFALVCGTKSGPALRCYSPGNIDKELVEAARDFLRNVGIVVDPEAKVASVSKILR WYSTDFGKNETEVLKHAANYLEPAESEQFLELLANTQLKVLYQPYDWSLNI

Transcript Sequence

Transcript ID	Os06t0224200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6440527:6447606:-1 gene:Os06g0224200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRX-like protein 12, glutaredoxin-like protein 12 description:Thioredoxin fold domain containing protein. (Os06t0224200-01)
Sequence	AGTTTCACTTCCCCCTTGGTCTTGGTCCGTCTCCACTCTCTCCACTCCGCCGCCGCCACC GCTCGTCGTCGCCTCCCCCCCCAAATCAAAAATCAAAATCAAAACCCCCCCATCTCTTCT TCTAGTTTCTTCTAGAAGCCGGGACGAACACCGCGTCGTCTTCGCCTTCGCCTTCGTCGT CTCCCGCTCGCTTCCTCCCTCCTGGGTTAGACTGTTAAGCTTATCCTGCATCATGGAGAA TGGAGACAAGGATGAGAAAAATGTTGCTGTCACGGAAGGATCTACCAATTCTGAAGAAAA GGATCAAGATGAGGATTTGTTGAGGAGAACAGAAATGCTGAATGCAAAAGAAGCAATAAA TTCTTCAAATGAGAATTCAGGCAATGATTCAGAAGCACAGATCCATGTGAGAGATGATTC ACAAAAAGAATTCAATGAGAAGATGAATAAAGAAGGAAGCTCAGATCCAATGGAACCTAC AGATTCAAGCCAGACAGAGGAAGATATCCTTGCTGAAGACAAATCTGAAGAACCTGTTTT TGATGGAACTGAGGTTGCTGAAATGGAAGATTTGAGGCGTTCGTCCAATCAATCTGTGGA ACTTGATTCAGATGCCCATGGGTCTGTACTCAATGAAAGAGCTACTGCAATCAAGAATTT TGTTAAGGAAAAGGGTGCCATTGCAGTTTCAACATTTATAAGGCGCCTTTCTGGCAAAAA GGACGAAAATGAATTTTCTGTTGAAGATGAAAAGAATGAAGGATCAGAAAGCATCAGTAG TGGCAATATTGGCTCAGATGCTGAACCTAAATCAAAAGAGGTGCAGCCCAAATCTGAGGA GAGAACTACATGGAATCCACTCAACTTGATTAAAATCGGACGAGATTTTGATACCTTCAT GACTGGGGAAGCTGGGCATGAAAATGTGCCAGATTTGATAGAGCAACCAACAGGGAAGGG AAGAATTATTATATACACAAAACTGGGTTGTGAAGATTGCAAAATGGTTCGCTCATTCAT GCGTCAGAAAATGCTCAAGTATGTTGAGATCAACATCGACATATTCCCCAGTAGAAAGAT GGAACTAGAAAATAATACTGGGTCATCCACAGTACCAAAAGTGTATTTCAATGACTTGCT GATTGGAGGGTTAACTGAATTGAAGAAAATGGAGGAGTCTGGCATTCTTGATGACAGAAC TGATGCTCTTTTCAAAGATGAACCCTCATCTGCTGCTCCGTTGCCTCCCTTACCTGGAGA AGATGATGAATCTGGTAGTGGGAAGATAGATGAGTTGGCAACCATTGTCAGAAAAATGAG AGAGTCAATCACTCTGAAGGATAGATTTTACAAAATGAGAAGATTTAGCAGCTGCTTTCT TGGTAGTGAAGCTGTAGATTTCTTATCAGAAGATCAATATTTAGAGAGAGATGAGGCGGT GGAATTTGGAAGAAAGCTTGCAAGCAAATATTTCTATCGCCATGTTTTAGACGAAGATGT ATTTGAAGATGGAAATCACTTGTATCGCTTCCTGGATAATGATCCCATAATTATGAGCCA GTGCTACAACATCCCTAAGGGTATCATTGATGTTGAACCGAAACCAATTGTTGAAGTGGC ATCAAGGTTAAGAAAGTTGTCTGAAACCATGTTTGAAGCTTATGTATCTGAAGATGGTAA ACATGTTGACTACAGAAGCATCCAGGGTTGTGAAGAATTTAAAAGGTATGTTAGAACAAC TGAGGAGCTCCAGAGGGTGGAAACCCATGAGTTATCACGGGAAGAAAAGCTCGCTTTCTT CATAAATCTCTACAATATGATGGCTATCCATGCATTAGTGACATGTGGTCATCCTGCTGG ACCATTGGACAGGAGAAAGTTCTTTGGAGATTTTAAGTATGTCATTGGTGGATGTGCTTA TTCAATGTCAGCTATTCAAAATGGCATACTGCGTGGTAACCAAAGGCCACCATACAACCT TGCCAAGCCTTTTGGACAGAAAGACCAAAGATCCAAGGTGGCCCTTCCATATGCTGAACC TCTTGTTCACTTTGCTTTGGTATGTGGGACCAAATCTGGACCTGCACTTAGGTGTTACTC GCCAGGAAACATCGATAAAGAACTGGTGGAAGCTGCACGTGATTTCCTAAGAAATGTAGG AATTGTTGTTGATCCTGAAGCCAAGGTTGCATCTGTAAGCAAGATTTTGCGATGGTATAG CACAGACTTTGGTAAGAACGAGACGGAAGTGCTGAAGCATGCGGCAAATTATCTGGAACC AGCAGAGTCGGAGCAATTCTTGGAACTACTTGCGAACACTCAACTGAAAGTCTTGTATCA ACCCTATGACTGGAGCTTAAACATTTAGCTGCAGCCATGGTATTCACATAGATGTCTAGT TATACTTGAATACCTGTCACAGATACTCGTGGAAGATCACGACTTCTTTTACACCAGAAT TTTCCCAAGAGTTGGTCACAGCTCTGGATGCTGTTTTGTTGTGGCACAAAGAAATGAGTA CCAATCCAACTCTGTTCGATTCACTGGAC