Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0222900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:6349120:6352936:-1 gene:Os06g0222900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.56) (At5PTase2). (Os06t0222900-01)
Sequence	ATGTCGTCCAACATGTTCGGCAAGAAAGGGTGGGACTCGAATGGGATGGATACATCTGGT TCTGTCTGCAGAAGTTCTTCAGATATCAATTACATTAATCAACGGGCAAGATTGAAGAGT GCGAGCCTAAACTGTGTGGGTTCGCCGCCAAGGAAGAACAACAATGCTACACAGTACCGG ATGTTTGTTGCCACATGGAATGTGGGAGGAAGAACTCCTAATAAACGACTTAACCTTCAA GACTTTCTGCAGGTTGAAGAATCTCCTGACATCTACGTCTTAGGGTTTCAGGAGATTGTC CCCCTGACCGCCGGCAATGTGCTCGTCCTCGAAGACAACGAGCCGGCGGCGAGGTGGCTG GCGCTGATCCACCAGGCGCTGAACATGCCCCAAGAACCGGCCGACGGCGACGAGCCATCG CCTTTGACGCCGCCGCCGTCGTCGTCGACGACGACGTCGGAGTCGTCGAACGGCGCCCGG ACCCGGCGGCGCGACGCCGTGTCGAGGTCAGCCAGCGGCAACCTCTTCTTCCACACGCCG TCGCTCAAGATGCTCAGCAACAGCTACCGCGTCGACAGCGCGCTAGTCAAGACGTGCAAC TGCTCGCCGGAGCACTCCTCCGTGCGCCGCCGTGCCGCGGAGGTGCGCGAGTCCGTGTAC CTCGCCGACGCACCCGCGCCAGCCGGCGAGACGGCGGCGCCAGCTGCCGACGAAGACGAC GCGCCGACGACGGAGGCGCAGTGCGAGGCAGGATGCGGCGGCGGCGGCGGCATGAGCTAC TGCCTGATCGCGAGCAAGCAGATGGTGGGGCTCTTCCTGTCGGTGTGGGTGAGGAAGGAG CTCGTCGAGCACGTCGGCCATCTCCGGGTGGACTGCGTCGGGCGCGGCATCATGGGGTGG CTCGGCAACAAGGGCTGCATCGCCATCAGCATGACGCTGCACCACACCAGCCTCTGCTTC GTCTGCAGCCACCTCGCCTCCGGCGAGAAGGAAGGCGACGAGCTGCGGCGCAACGCCGAC GTCGCCGAGATCCTCAAGAGCGCGCACTTCCCGCGCGCCTGCCGCCCGGCGCCCGCCGCC GCCCGCCGCGTCCCCGAGAGGATTCTTGACCACGACCGAATGATCTGGCTCGGCGATCTG AACTACCGCATGTCGTTAAGCTACGACGAGACAAGAACACTACTGGAGGACAACGACTGG GACGCTCTACTGGAGAAAGATCAGCTGTTGATCGAGAGAGAAGCGGGGAGAGTGTTCAGA GGCTGGAACGAAGGAAAGATCTGCTTCGCGCCGACGTACAAGTACACGCACAACTCCGAC GCGTACGCCGGCGAGACGGCCAAGTCCAAGAAGAAGCGGAGGACGCCCGCATGGTGCGAC CGGATACTGTGGCAGGGAGACGGCATCGAGCAGCTTCAGTACCTGCGCGGAGAGTCGAGG TTCTCCGACCACCGGCCGGTCTGCGGCGTGTTCGCCGTCGAGGTGGACGGCGGCGATGGC GACGGCGGCGGCGCCGCCGGCAAGATCATGAAGGGTTACTACTCCCTCAACGCCCGGATC GGCGGTGACAGATCGCAGTGTCACCAGGGTGACGTGTCGTGA

Peptide Sequence

PEP ID	Os06t0222900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:6349120:6352936:-1 gene:Os06g0222900 transcript:Os06t0222900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.56) (At5PTase2). (Os06t0222900-01)
Sequence	MSSNMFGKKGWDSNGMDTSGSVCRSSSDINYINQRARLKSASLNCVGSPPRKNNNATQYR MFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNEPAARWL ALIHQALNMPQEPADGDEPSPLTPPPSSSTTTSESSNGARTRRRDAVSRSASGNLFFHTP SLKMLSNSYRVDSALVKTCNCSPEHSSVRRRAAEVRESVYLADAPAPAGETAAPAADEDD APTTEAQCEAGCGGGGGMSYCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGW LGNKGCIAISMTLHHTSLCFVCSHLASGEKEGDELRRNADVAEILKSAHFPRACRPAPAA ARRVPERILDHDRMIWLGDLNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFR GWNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESR FSDHRPVCGVFAVEVDGGDGDGGGAAGKIMKGYYSLNARIGGDRSQCHQGDVS

Transcript Sequence

Transcript ID	Os06t0222900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:6349120:6352936:-1 gene:Os06g0222900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.56) (At5PTase2). (Os06t0222900-01)
Sequence	AGGCTAACCACCCTCGACGTTTCTCTCCCTCGATTCACGGCAACCTCTCGGAGCGTGGTC GCAGCAACGGCCGCGGCGTTGGTGGCAATGGAACGCCCAATCTCCATGCTTCTTCTTGCT GTCGAACACCAGATCGCAGGAGACAAGAATCAGTGAGCATGCATCATGTCGTCCAACATG TTCGGCAAGAAAGGGTGGGACTCGAATGGGATGGATACATCTGGTTCTGTCTGCAGAAGT TCTTCAGATATCAATTACATTAATCAACGGGCAAGATTGAAGAGTGCGAGCCTAAACTGT GTGGGTTCGCCGCCAAGGAAGAACAACAATGCTACACAGTACCGGATGTTTGTTGCCACA TGGAATGTGGGAGGAAGAACTCCTAATAAACGACTTAACCTTCAAGACTTTCTGCAGGTT GAAGAATCTCCTGACATCTACGTCTTAGGGTTTCAGGAGATTGTCCCCCTGACCGCCGGC AATGTGCTCGTCCTCGAAGACAACGAGCCGGCGGCGAGGTGGCTGGCGCTGATCCACCAG GCGCTGAACATGCCCCAAGAACCGGCCGACGGCGACGAGCCATCGCCTTTGACGCCGCCG CCGTCGTCGTCGACGACGACGTCGGAGTCGTCGAACGGCGCCCGGACCCGGCGGCGCGAC GCCGTGTCGAGGTCAGCCAGCGGCAACCTCTTCTTCCACACGCCGTCGCTCAAGATGCTC AGCAACAGCTACCGCGTCGACAGCGCGCTAGTCAAGACGTGCAACTGCTCGCCGGAGCAC TCCTCCGTGCGCCGCCGTGCCGCGGAGGTGCGCGAGTCCGTGTACCTCGCCGACGCACCC GCGCCAGCCGGCGAGACGGCGGCGCCAGCTGCCGACGAAGACGACGCGCCGACGACGGAG GCGCAGTGCGAGGCAGGATGCGGCGGCGGCGGCGGCATGAGCTACTGCCTGATCGCGAGC AAGCAGATGGTGGGGCTCTTCCTGTCGGTGTGGGTGAGGAAGGAGCTCGTCGAGCACGTC GGCCATCTCCGGGTGGACTGCGTCGGGCGCGGCATCATGGGGTGGCTCGGCAACAAGGGC TGCATCGCCATCAGCATGACGCTGCACCACACCAGCCTCTGCTTCGTCTGCAGCCACCTC GCCTCCGGCGAGAAGGAAGGCGACGAGCTGCGGCGCAACGCCGACGTCGCCGAGATCCTC AAGAGCGCGCACTTCCCGCGCGCCTGCCGCCCGGCGCCCGCCGCCGCCCGCCGCGTCCCC GAGAGGATTCTTGACCACGACCGAATGATCTGGCTCGGCGATCTGAACTACCGCATGTCG TTAAGCTACGACGAGACAAGAACACTACTGGAGGACAACGACTGGGACGCTCTACTGGAG AAAGATCAGCTGTTGATCGAGAGAGAAGCGGGGAGAGTGTTCAGAGGCTGGAACGAAGGA AAGATCTGCTTCGCGCCGACGTACAAGTACACGCACAACTCCGACGCGTACGCCGGCGAG ACGGCCAAGTCCAAGAAGAAGCGGAGGACGCCCGCATGGTGCGACCGGATACTGTGGCAG GGAGACGGCATCGAGCAGCTTCAGTACCTGCGCGGAGAGTCGAGGTTCTCCGACCACCGG CCGGTCTGCGGCGTGTTCGCCGTCGAGGTGGACGGCGGCGATGGCGACGGCGGCGGCGCC GCCGGCAAGATCATGAAGGGTTACTACTCCCTCAACGCCCGGATCGGCGGTGACAGATCG CAGTGTCACCAGGGTGACGTGTCGTGAACTGATTATATATTTCATCCCCTTTTGCAAGTT TGCAATGATAGGGTCTTGTGTATAAGAAGGTTTATTACCAAGAACAGAGGATATTGTAGA TACTAGTATCTGACAAGAATCCCATGACTGAAATTAGTACGAGTACTGACTAATTAAGAA TACAGTAATTTTCGTAATTTGTAGAACCTGTCTAGCTGTATGGTTATTTTTGTCCACTTA TATGAACCCCTTGGGCAGAGAAAGTTGTCTCGTATATATGTATAGACAAATTATGTACTC GTTATATTGTTATATTTTTTTC