Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0221100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6243743:6247717:-1 gene:Os06g0221100 gene_biotype:protein_coding transcript_biotype:protein_coding description:TLDc domain containing protein. (Os06t0221100-01)
Sequence

ATGGGGTACCTGCCGTCGCTGGGCGGGAAGGCGGCGCACCTGGTGTCCGACCTCGCCACC
GTCATCCTCAACCCCGTCTCCGAGCGGGAGAGCCAGCGCCACCCCTCCCACCTCCCCGAG
GCCACTGAAGTGCAAGAAAATATCTATGAGGATGACGATGATGATAATTCAGTCAAGAAT
TCTGAGATTCCTAATGGCCCTGACACATCTTCCTTCAGAGCATTCCTGATGTCATTTATG
TCGTCATCAAACTCCAGCAGTGATTCTATAGAAATCATACCTGAGCACAATATGAATATG
GAATATCCAACTTTAACACCTGTTGGGAAGGGAAGCAATGGAAGGAAGGGCCTGTTTAGC
AGAGGGAAGCATTCCATTGGAAAAATCATTAACAAAGCAGGCAGAATTGGTGGTTTCAGA
CAAAAACCCAGCTACAGCATTGATGGTGAAACTGTTCAAACAGAATATGATGCACCTGGG
TTGGAACTTAAGGGATCAAAGGAATCTGCTTCACATGATAAGTTACCAGCCATGTCTGAA
CCATCAATGCTTTTGTCTGAAACAATGCGAACTGTTCTTTATACATCTCTTCCTGTACTT
GTCCAAGGAAGGAACTGGATGTTGGTATACAGTACCTGGAGACATGGAATATCTTTATCT
ACTCTGTATAGAAGGAGCATGCTTTGTGCAGGCTACTCACTTTTGATAGTTGGGGATCGA
AAAGGAGCGGTTTTCGGTGGGTTGGTTGAGGCCCCATTGCAACCATTAATAAAAAAGAAG
TATCAGGGGACCAACAACTGCTTTGTGTTCACCAATATAGCTGGCCGTCCTGTTATATAT
CGTCCAACAGGTGCTAATAACTATTTCACATTTTGCTCCACCGATTATTTGGCAATGGGA
GGTGGTGGTCACTTTGCACTTTATCTTGATGGAGACCTTCTGAATGGTTCAAGTTCCACT
TCAGAGACATTTAACAACCCGTGCTTATCACGTTCCCGGGAGTTTGAAGTCAAAGATGTC
GAGCTATGGGGCTTCGTCAATGCTTCCAAGTATGATGAGATGCTCACTATCTGCCGTACT
GAGAAGCAAGGGATCTGGAATCTGTGA

Peptide Sequence

PEP ID

Os06t0221100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6243743:6247717:-1 gene:Os06g0221100 transcript:Os06t0221100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TLDc domain containing protein. (Os06t0221100-01)
Sequence

MGYLPSLGGKAAHLVSDLATVILNPVSERESQRHPSHLPEATEVQENIYEDDDDDNSVKN
SEIPNGPDTSSFRAFLMSFMSSSNSSSDSIEIIPEHNMNMEYPTLTPVGKGSNGRKGLFS
RGKHSIGKIINKAGRIGGFRQKPSYSIDGETVQTEYDAPGLELKGSKESASHDKLPAMSE
PSMLLSETMRTVLYTSLPVLVQGRNWMLVYSTWRHGISLSTLYRRSMLCAGYSLLIVGDR
KGAVFGGLVEAPLQPLIKKKYQGTNNCFVFTNIAGRPVIYRPTGANNYFTFCSTDYLAMG
GGGHFALYLDGDLLNGSSSTSETFNNPCLSRSREFEVKDVELWGFVNASKYDEMLTICRT
EKQGIWNL

Transcript Sequence

Transcript ID

Os06t0221100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6243743:6247717:-1 gene:Os06g0221100 gene_biotype:protein_coding transcript_biotype:protein_coding description:TLDc domain containing protein. (Os06t0221100-01)
Sequence

CCCTTCTGACCCTCCTGACCTCCCCGAGCCCCAACACGACGACACGGAGCACAAACCTCC
CGCGCCTCACCACTTCCCCTCGCCTCCGCCGCCCCCACTTGGCCACATCTCCTCCGGTCT
CGGTCCCCGCGGCGGCGGCGGCGGAGGAGCTCGCCCATGTTGTTCCGCGGACTTCTCGCT
TGGGCTGTCGGGTAGGGAACCCTGAGAAAACGCATACCGGCGGTCGCGGAGAGCAGAGCA
AAGGCGGGGGATGGGGTACCTGCCGTCGCTGGGCGGGAAGGCGGCGCACCTGGTGTCCGA
CCTCGCCACCGTCATCCTCAACCCCGTCTCCGAGCGGGAGAGCCAGCGCCACCCCTCCCA
CCTCCCCGAGGCCACTGAAGTGCAAGAAAATATCTATGAGGATGACGATGATGATAATTC
AGTCAAGAATTCTGAGATTCCTAATGGCCCTGACACATCTTCCTTCAGAGCATTCCTGAT
GTCATTTATGTCGTCATCAAACTCCAGCAGTGATTCTATAGAAATCATACCTGAGCACAA
TATGAATATGGAATATCCAACTTTAACACCTGTTGGGAAGGGAAGCAATGGAAGGAAGGG
CCTGTTTAGCAGAGGGAAGCATTCCATTGGAAAAATCATTAACAAAGCAGGCAGAATTGG
TGGTTTCAGACAAAAACCCAGCTACAGCATTGATGGTGAAACTGTTCAAACAGAATATGA
TGCACCTGGGTTGGAACTTAAGGGATCAAAGGAATCTGCTTCACATGATAAGTTACCAGC
CATGTCTGAACCATCAATGCTTTTGTCTGAAACAATGCGAACTGTTCTTTATACATCTCT
TCCTGTACTTGTCCAAGGAAGGAACTGGATGTTGGTATACAGTACCTGGAGACATGGAAT
ATCTTTATCTACTCTGTATAGAAGGAGCATGCTTTGTGCAGGCTACTCACTTTTGATAGT
TGGGGATCGAAAAGGAGCGGTTTTCGGTGGGTTGGTTGAGGCCCCATTGCAACCATTAAT
AAAAAAGAAGTATCAGGGGACCAACAACTGCTTTGTGTTCACCAATATAGCTGGCCGTCC
TGTTATATATCGTCCAACAGGTGCTAATAACTATTTCACATTTTGCTCCACCGATTATTT
GGCAATGGGAGGTGGTGGTCACTTTGCACTTTATCTTGATGGAGACCTTCTGAATGGTTC
AAGTTCCACTTCAGAGACATTTAACAACCCGTGCTTATCACGTTCCCGGGAGTTTGAAGT
CAAAGATGTCGAGCTATGGGGCTTCGTCAATGCTTCCAAGTATGATGAGATGCTCACTAT
CTGCCGTACTGAGAAGCAAGGGATCTGGAATCTGTGACTGTCTGTTTACAATTGATCTGA
GCTGTTTAGTGCTTGTACCTGATGCCAACCCATCCTGGTGGTTTGTACAGTTTTGTAGTT
CTGTCTGTTAAGTATAGTATATATAGGCCTTGTTGGAGTTCTGTCTGTATGTATAGTAAA
ATGCCCCTTGTAAAACAAGTTCATCAACGGAGTTATGGAGCTTAAAATGAGTAACTCTGA
AACATG