Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0221000-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:6239975:6241172:1 gene:Os06g0221000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P-type R2R3 Myb protein (Fragment). (Os06t0221000-00)
Sequence

ATGGGGAGGCCTCCTTGTTGTGATGAGAATGGCCTCAAGAAGGGCCCCTGGACTCCTGAA
GAAGATGAGAAGCTCATGAGCTACATTCAGAAACATGGCCATGCAAGCTGGAGAGTCTTA
CCTGAACTTGCTGGCTTGAACAGATGTGGTAAGAGCTGCAGGCTAAGATGGACCAACTAT
CTGAAACCAGACATCAAGAGAGGGAACTTCTCGCGTGAGGAAGAGCAAACTATCCTCCAG
CTGCATTCCATCCTTGGCAACAAGTGGTCAGCTATTGCAAAGCATCTCCCTGGACGGACA
GATAACGAGATCAAGAACTTCTGGAACACCCACCTCAGGAAGAAACTGATCAAGATGGGC
ATTGATCCAATGACCCACTGCCCAAGAACAGACTTCTTTCAGTCCCTCCCGCAGCTCATT
GCACTTGCCAACCTCCGCCAGATTATCGAGCGACAACCGTGGGATGGCCACATTGAGGGC
CTGCAGACTGTGGCAGTTCAGGCTGCCAAGCTCGAATACATGCAATCACTGCTACATTCT
GCAGTGTCCATTGTGACCAGCCCCACCACCACCACCACCACCAGCAGCTTAAACACCTTC
ACCACCGAACTGGAGCAGACCAACCACCTATGCCCTCCACAGGTGCCTTCTTCAAGTGTC
CCTGAATTAGCTGTACAGGTGCCTCACAGCCAAATGCCTAGCACTTCATTTGATCAGGAA
ATTGGCAAAACCAACCTGTTCTCAAATAACATTGTCAATGGCAATGAGTGGTGCAGCATG
GAGGCAGATAACAGCAGCCAGAAAAGCTTGTTGGTCCCTGAAAACTCCATTCCACCACTC
ATTGACATGCCAGTGCAAAACTTTTGTAATACTATCAGCACACCAAACTGTGACGGCGGC
AATAGTATTCCACTGCCCAGTTGGTCTGAAATCCTACTTGATGAAGAACTCATGGGTGAA
TTTGCTTGA

Peptide Sequence

PEP ID

Os06t0221000-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:6239975:6241172:1 gene:Os06g0221000 transcript:Os06t0221000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P-type R2R3 Myb protein (Fragment). (Os06t0221000-00)
Sequence

MGRPPCCDENGLKKGPWTPEEDEKLMSYIQKHGHASWRVLPELAGLNRCGKSCRLRWTNY
LKPDIKRGNFSREEEQTILQLHSILGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMG
IDPMTHCPRTDFFQSLPQLIALANLRQIIERQPWDGHIEGLQTVAVQAAKLEYMQSLLHS
AVSIVTSPTTTTTTSSLNTFTTELEQTNHLCPPQVPSSSVPELAVQVPHSQMPSTSFDQE
IGKTNLFSNNIVNGNEWCSMEADNSSQKSLLVPENSIPPLIDMPVQNFCNTISTPNCDGG
NSIPLPSWSEILLDEELMGEFA

Transcript Sequence

Transcript ID

Os06t0221000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6239975:6241172:1 gene:Os06g0221000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P-type R2R3 Myb protein (Fragment). (Os06t0221000-00)
Sequence

AGGGACCAAGTAGAGGCAACTCATCTGCCCTCTCCTACTAGGATTGTCGTCCTACTTCTT
ATCCATCAATGGGGAGGCCTCCTTGTTGTGATGAGAATGGCCTCAAGAAGGGCCCCTGGA
CTCCTGAAGAAGATGAGAAGCTCATGAGCTACATTCAGAAACATGGCCATGCAAGCTGGA
GAGTCTTACCTGAACTTGCTGGCTTGAACAGATGTGGTAAGAGCTGCAGGCTAAGATGGA
CCAACTATCTGAAACCAGACATCAAGAGAGGGAACTTCTCGCGTGAGGAAGAGCAAACTA
TCCTCCAGCTGCATTCCATCCTTGGCAACAAGTGGTCAGCTATTGCAAAGCATCTCCCTG
GACGGACAGATAACGAGATCAAGAACTTCTGGAACACCCACCTCAGGAAGAAACTGATCA
AGATGGGCATTGATCCAATGACCCACTGCCCAAGAACAGACTTCTTTCAGTCCCTCCCGC
AGCTCATTGCACTTGCCAACCTCCGCCAGATTATCGAGCGACAACCGTGGGATGGCCACA
TTGAGGGCCTGCAGACTGTGGCAGTTCAGGCTGCCAAGCTCGAATACATGCAATCACTGC
TACATTCTGCAGTGTCCATTGTGACCAGCCCCACCACCACCACCACCACCAGCAGCTTAA
ACACCTTCACCACCGAACTGGAGCAGACCAACCACCTATGCCCTCCACAGGTGCCTTCTT
CAAGTGTCCCTGAATTAGCTGTACAGGTGCCTCACAGCCAAATGCCTAGCACTTCATTTG
ATCAGGAAATTGGCAAAACCAACCTGTTCTCAAATAACATTGTCAATGGCAATGAGTGGT
GCAGCATGGAGGCAGATAACAGCAGCCAGAAAAGCTTGTTGGTCCCTGAAAACTCCATTC
CACCACTCATTGACATGCCAGTGCAAAACTTTTGTAATACTATCAGCACACCAAACTGTG
ACGGCGGCAATAGTATTCCACTGCCCAGTTGGTCTGAAATCCTACTTGATGAAGAACTCA
TGGGTGAATTTGCTTGA