Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0218800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6101061:6102004:1 gene:Os06g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os06t0218800-01)
Sequence

ATGGCAGCCGTGGGGAAGTCGAAGGAGGCGGACGCGGCGCGGTGCAGGAGGCACCCGAAG
CACCGGCACGCGGCGGGGGTGTGCCCGTTCTGCCTGCGCGACCGCCTCTCGCGCCTCTCC
GCCGAGGTCGCCAGCGCTGCCTCGCCGTCGCCGTCGTCGGCGTCGTCGTCGGGATCCTCC
TCCTCGCTGTGCTCGTCGACCGGGGAGGGGAGTTACTCCGCCGCGTCGGCGACCCAGGCG
CCGCCCGTCGGCCGCCGCGCGAGGCTGGGCATGCTGATGCGACAGGAGGAGCAGAGGGAG
ACGACCGCGACGGCGGCGACGGTGCTCGGCGCCGCAGGTCATGACAAGAAGGAGGTGCCC
CCTGCGGAGGAGGAGAAGAAGACGGCGAGGAGGAGCGGCTTCTGGGCGAGGCTGCAGCAG
CAGCTCCATCACGGGAGCTGGCACCGGAAGGCCGACGGGTGCTCACTGGCGCACTCCAAG
GCGGTCAGCGAGAAGGCCGCCGCCGCCGCCGCCGCGCCGGCCAAGCGGCCACCGGCGTTG
TTCTGA

Peptide Sequence

PEP ID

Os06t0218800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6101061:6102004:1 gene:Os06g0218800 transcript:Os06t0218800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os06t0218800-01)
Sequence

MAAVGKSKEADAARCRRHPKHRHAAGVCPFCLRDRLSRLSAEVASAASPSPSSASSSGSS
SSLCSSTGEGSYSAASATQAPPVGRRARLGMLMRQEEQRETTATAATVLGAAGHDKKEVP
PAEEEKKTARRSGFWARLQQQLHHGSWHRKADGCSLAHSKAVSEKAAAAAAAPAKRPPAL
F

Transcript Sequence

Transcript ID

Os06t0218800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6101061:6102004:1 gene:Os06g0218800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os06t0218800-01)
Sequence

ACGGGCAAAGCGCTATCAACGACACGCGCGCGTGTGTTCCACTCCTCCTCTACGTAGTGT
ACGACTGTACGTTAGTTGCCAGCCATGGCAGCCGTGGGGAAGTCGAAGGAGGCGGACGCG
GCGCGGTGCAGGAGGCACCCGAAGCACCGGCACGCGGCGGGGGTGTGCCCGTTCTGCCTG
CGCGACCGCCTCTCGCGCCTCTCCGCCGAGGTCGCCAGCGCTGCCTCGCCGTCGCCGTCG
TCGGCGTCGTCGTCGGGATCCTCCTCCTCGCTGTGCTCGTCGACCGGGGAGGGGAGTTAC
TCCGCCGCGTCGGCGACCCAGGCGCCGCCCGTCGGCCGCCGCGCGAGGCTGGGCATGCTG
ATGCGACAGGAGGAGCAGAGGGAGACGACCGCGACGGCGGCGACGGTGCTCGGCGCCGCA
GGTCATGACAAGAAGGAGGTGCCCCCTGCGGAGGAGGAGAAGAAGACGGCGAGGAGGAGC
GGCTTCTGGGCGAGGCTGCAGCAGCAGCTCCATCACGGGAGCTGGCACCGGAAGGCCGAC
GGGTGCTCACTGGCGCACTCCAAGGCGGTCAGCGAGAAGGCCGCCGCCGCCGCCGCCGCG
CCGGCCAAGCGGCCACCGGCGTTGTTCTGATGCGCGCGTGCCCGCGCGCACGACGAGAGG
AAGCGAGCACCATGCAGTACGTGCAGGCGTGAGCCAGCCAGCGCGGCGTGATCGATGTTT
GGTTGGTAGTGGTAGCCTCTCGTCGCGTCGCGTGCGCTGTTCATCCGGGGGGCTCACGTT
GATCACCTGGCATGTTTCGTTATCTTTCGGTGCGCTTTTTGGGTCGTGGCTTGTGGTGGG
TGCGGGGGGTGCCGAAAGGACGGCCTAATGGCAAACGTCCCGTTTTGTATAGATCTAAGA
TCTGAGGGAAGAAATGGCACTCGGCTCGAATCGGCTGCGTGATT