Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0217700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:6007466:6010097:-1 gene:Os06g0217700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0217700-01)
Sequence

ATGGACGCCCTCGTCTGCACCAACGCCTTCGCCACCGCCATCGCCGCCGGCAGGTTTCCC
CTCCCGCGAGGCCGCTCGCCCCCGTACGCCGCGGCAGCCGTCCCCGCCCTCCGCTCCCGC
CGCTGCCTCCCGACTCGAGGGCTGCTACGCCTGCGCTGCGCCAGGGGGGTGGATTGGACT
GATCCGTCGTTCGTGGCAGTCGCGGAGAAGCCCGACGCGGGGGCGGAGGCATGGAAGGCG
CTCGCATCCGCGGGCGGCGGTGGCATCGAGGAGGAGGAGGATGGCCCGTTTGAGGCGATC
AACGGTGATGGAGGATACTCGGTGGAGGAGTCTGTGGTCTTGCCGCCATTCGAGCAGAGC
TTGGTGGCGGCGGTGGCGGACAGTGTCGAGGACGATGCGCTCAGTCAGGCGCTCAGCTCT
AAGTTGGATTTCAAGGAGACGTCTACTTTTGTCATGTATGGCAGTGGTGCTTTCATTGCC
GGATGGATTTTGTCTGCTGTTGTTTCAGCAATTGATTCCATTCCCTTGTTCCCAAAGATA
CTGCAAATTGTAGGCCTTGGCTACACAATTTGGTTCAGCACACGGTATCTTCTTTTCAAG
GAAAACAGAGATGAACTGTTTGTTAAAGTTGATGATCTCAAAAGGAAAATTACTGGGTAT
GGTGATGAATAA

Peptide Sequence

PEP ID

Os06t0217700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:6007466:6010097:-1 gene:Os06g0217700 transcript:Os06t0217700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0217700-01)
Sequence

MDALVCTNAFATAIAAGRFPLPRGRSPPYAAAAVPALRSRRCLPTRGLLRLRCARGVDWT
DPSFVAVAEKPDAGAEAWKALASAGGGGIEEEEDGPFEAINGDGGYSVEESVVLPPFEQS
LVAAVADSVEDDALSQALSSKLDFKETSTFVMYGSGAFIAGWILSAVVSAIDSIPLFPKI
LQIVGLGYTIWFSTRYLLFKENRDELFVKVDDLKRKITGYGDE

Transcript Sequence

Transcript ID

Os06t0217700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:6007466:6010097:-1 gene:Os06g0217700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0217700-01)
Sequence

AAGATAACTCTCCCACATCCTCGGCGCGAGACGTGAACGAAACGTCCCAAGCCTACCGCC
GCCGCGAGGATCTCTCGAATCGCGCAACTCACAGCAGAGGGAGAGGAAGAAGCCGAGCGC
CATGGACGCCCTCGTCTGCACCAACGCCTTCGCCACCGCCATCGCCGCCGGCAGGTTTCC
CCTCCCGCGAGGCCGCTCGCCCCCGTACGCCGCGGCAGCCGTCCCCGCCCTCCGCTCCCG
CCGCTGCCTCCCGACTCGAGGGCTGCTACGCCTGCGCTGCGCCAGGGGGGTGGATTGGAC
TGATCCGTCGTTCGTGGCAGTCGCGGAGAAGCCCGACGCGGGGGCGGAGGCATGGAAGGC
GCTCGCATCCGCGGGCGGCGGTGGCATCGAGGAGGAGGAGGATGGCCCGTTTGAGGCGAT
CAACGGTGATGGAGGATACTCGGTGGAGGAGTCTGTGGTCTTGCCGCCATTCGAGCAGAG
CTTGGTGGCGGCGGTGGCGGACAGTGTCGAGGACGATGCGCTCAGTCAGGCGCTCAGCTC
TAAGTTGGATTTCAAGGAGACGTCTACTTTTGTCATGTATGGCAGTGGTGCTTTCATTGC
CGGATGGATTTTGTCTGCTGTTGTTTCAGCAATTGATTCCATTCCCTTGTTCCCAAAGAT
ACTGCAAATTGTAGGCCTTGGCTACACAATTTGGTTCAGCACACGGTATCTTCTTTTCAA
GGAAAACAGAGATGAACTGTTTGTTAAAGTTGATGATCTCAAAAGGAAAATTACTGGGTA
TGGTGATGAATAATGTGTTAGAATGAGGCTGGACTTTAGTTTCGTCTTGTGTTTAGTTAG
ATTTTTTTTATCATGCTACAAAATTGCAATGCCTGTGCAATTATATGTATTGTTATCGGC
TATTTGTAATGAATGAATATTCTTTGCCAACAAATCGAGCAGTCATCTGCTGTTTTGAAT
AGTG