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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0217500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:5977401:5980737:-1 gene:Os06g0217500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED6, Mediator 6_1 description:MED6 mediator family protein. (Os06t0217500-01)
Sequence

ATGTCGGGGACGCCTCTTCCCCCACCGGCGCTCCCGCCCCCGCCGGGCACGGACATGACC
GGGATCTGCTTCCGCGACCAGCTCTGGCTCAACACCTACCCGCTCGACCGCAACCTCGTC
TTCGACTACTTCGCGCTCTCCCCCTTCTACGACCTCACCTGCAACAACGAGTCCCTCCGC
TCGCGCCAAATCCACCCCCTCGACATGTCCCACCTCACGAAGATGACGGGGATGGAGTAC
GTGCTCAGCGACGTGATGGAGCCGCACCTGTTCGTGATCCGGAAGCAGAGGCGGGAGAGC
CCCGAGAAGTCCAACGCCATGCTCGCCTACTACATCCTCGATGGCTCCATCTACCAGGCG
CCCCAGCTCTGCAGCGTCTTCGCGTCCCGCATCAGTAGGGCTATGCATCACATCTCAAAA
GCTTTTACTACGGCATGTTCAAAGTTGGAGAAAATTGGGCATGTGGAAACAGAGCCTGAC
ACAGCAGCTTCTGAATCAAAGACGCAGAAGGAAGCAATTGATTTGAAGGAGTTGAAGCGG
GTCGACCATATCCTAATGTCGTTGCAAAGGAAGCTGCAACCTGCTCCTCCCCCTCCACCT
TTTCCAGAGGGCTATGTACCATCAGAACAAGAGAAAGCATCAGATGATCTGTTGGCCTCA
GAGGCACTGCCTCCCCAGGTTGATCCTATCATTGATCAAGGCCCTGCAAAAAGGCCTAGA
TTCCAATGA

Peptide Sequence

PEP ID

Os06t0217500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:5977401:5980737:-1 gene:Os06g0217500 transcript:Os06t0217500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED6, Mediator 6_1 description:MED6 mediator family protein. (Os06t0217500-01)
Sequence

MSGTPLPPPALPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDLTCNNESLR
SRQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQA
PQLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKR
VDHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLASEALPPQVDPIIDQGPAKRPR
FQ

Transcript Sequence

Transcript ID

Os06t0217500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:5977401:5980737:-1 gene:Os06g0217500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED6, Mediator 6_1 description:MED6 mediator family protein. (Os06t0217500-01)
Sequence

AGCTTGCCTCCTCGTCTCGCCGGCGCAGGCGGCGCCTGCATCTATCCATCCATCCACCCA
CCCACGCCACCCTCCCGTTCCGATTCGGCGCACGCGGCTGCTAGACACCGCGTTCCTGAC
CCGCCGCGAATGTCGGGGACGCCTCTTCCCCCACCGGCGCTCCCGCCCCCGCCGGGCACG
GACATGACCGGGATCTGCTTCCGCGACCAGCTCTGGCTCAACACCTACCCGCTCGACCGC
AACCTCGTCTTCGACTACTTCGCGCTCTCCCCCTTCTACGACCTCACCTGCAACAACGAG
TCCCTCCGCTCGCGCCAAATCCACCCCCTCGACATGTCCCACCTCACGAAGATGACGGGG
ATGGAGTACGTGCTCAGCGACGTGATGGAGCCGCACCTGTTCGTGATCCGGAAGCAGAGG
CGGGAGAGCCCCGAGAAGTCCAACGCCATGCTCGCCTACTACATCCTCGATGGCTCCATC
TACCAGGCGCCCCAGCTCTGCAGCGTCTTCGCGTCCCGCATCAGTAGGGCTATGCATCAC
ATCTCAAAAGCTTTTACTACGGCATGTTCAAAGTTGGAGAAAATTGGGCATGTGGAAACA
GAGCCTGACACAGCAGCTTCTGAATCAAAGACGCAGAAGGAAGCAATTGATTTGAAGGAG
TTGAAGCGGGTCGACCATATCCTAATGTCGTTGCAAAGGAAGCTGCAACCTGCTCCTCCC
CCTCCACCTTTTCCAGAGGGCTATGTACCATCAGAACAAGAGAAAGCATCAGATGATCTG
TTGGCCTCAGAGGCACTGCCTCCCCAGGTTGATCCTATCATTGATCAAGGCCCTGCAAAA
AGGCCTAGATTCCAATGAGAGAGGTTGCATTGATAAGTTAAATTTGACTAACACCACAAT
TACCTGTGTTGTAAGTTGATGATTAGATTCTTTCAGTTCCACAGCTCGGAAGTTAAATAT
AAGTTGTGGTTTCAGTCGTAATGGTTATTTTGAAGGATAAATTCAAGGGAGCATAAATCT
GATTAGGTGGTACTGGCTGTTTGTCAGGCCTGTTTCTACTGTGCT