Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0216800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:5933850:5939505:-1 gene:Os06g0216800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 40A description:Similar to Cyclophilin-40 (Expressed protein). (Os06t0216800-01)
Sequence	ATGGAGGGCGGCGGCGAGGGCGCGGAGTCAGCAGCTGTCGCCTCCGCGGCGGCGGCGGAG GTGGAGGTGAAGAACCCGAGGTGCTTCATGGACGTCAGCATCGGCGGCGAGATTGAGGGG AGGATCGTTATAGAGCTCTACGCGTCGGTGGTGCCGCGGACGGCGGAGAACTTCCGCGCG CTCTGCACCGGGGAGAAGGGCGTCGGCGCCGTCACCGGGAAGCACCTACACTACAAGGGA TCTTGCTTCCATCGCGTTATCAAAGGCTTTATGGTACAAGGTGGAGATATAACTGCTGGT GATGGAACAGGAGGGGAGTCAATTTATGGGTTGAAGTTTGAGGATGAGAATTTTGTTTTG AAGCATGAGAGGAAAGGAATGCTATCAATGGCTAATTCTGGTCCCAACACAAATGGATCT CAGTTTTTCATCACTACAACTCGGACACCTCATTTAGATGGGAAACATGTAGTTTTTGGT AGAGTAATTAAGGGAATGGGGGTGGTTCGCTCTGTTGAGCATGCTCCTGTTGGAGAGGCT GACCGCCCGACTTCTGATGTTGAAATTGTCGATTGTGGGGAACTTCCGGAAGGTGCTGAT GATGGAGTTGTGAACTTCTTCAATGATGGTGATACGTATCCTGATTGGCCCAATGATCTT GATGAGAAGCCTATGGAGGTTTCATGGTGGATGGATGCTGTTGAGTCTGCTAAGGCTTTT GGGAATAATAATTTCAAGAAACAGGATTACAAGGCAGCTCTGAGAAAGTACAGGAAAGCA CTGCGTTACTTGGACGTTTGCTGGGAGAAAGAAGATATAGATGAAGAGAAGAGCTCAGCA CTGCGGAAGACCAAATCGATTATACTCACAAATAGCTCTGCATGCAAATTGAAGTTGGGA GATTTGAAGGGTGCTCTGTTGGATGCTGATTTTGCACTGCGTGAAAGTGAGGGCAATGCT AAGGCATTTTTTCGACAAGGACAGGCACACATTGCACTCAATGACATTGATGCGGCAGTG GAGAGCTTCAAGCATGCATTGGAGTTGGAGCCAAGTGATGGAGGAATTAAACGAGAGCTA GCTGCTGCAAAGAAGAAGATTGCCGACAGAAGGAATCAGGAGCGGAAGGCATTTGCAAGG ATGTTCCAACCTTCTGGAAAATCAGACAAAGACAATGAAGAGAGCAAGTGA

Peptide Sequence

PEP ID	Os06t0216800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:5933850:5939505:-1 gene:Os06g0216800 transcript:Os06t0216800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 40A description:Similar to Cyclophilin-40 (Expressed protein). (Os06t0216800-01)
Sequence	MEGGGEGAESAAVASAAAAEVEVKNPRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRA LCTGEKGVGAVTGKHLHYKGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVL KHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEA DRPTSDVEIVDCGELPEGADDGVVNFFNDGDTYPDWPNDLDEKPMEVSWWMDAVESAKAF GNNNFKKQDYKAALRKYRKALRYLDVCWEKEDIDEEKSSALRKTKSIILTNSSACKLKLG DLKGALLDADFALRESEGNAKAFFRQGQAHIALNDIDAAVESFKHALELEPSDGGIKREL AAAKKKIADRRNQERKAFARMFQPSGKSDKDNEESK

Transcript Sequence

Transcript ID	Os06t0216800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:5933850:5939505:-1 gene:Os06g0216800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 40A description:Similar to Cyclophilin-40 (Expressed protein). (Os06t0216800-01)
Sequence	GATGGCACCCACCCACAACGCAGCCTTCGCCGTTTGGCCCCCGAGGTAACCGACGGACAC CACCACCACCGCGCCGCCTCGCCTCGTGAAGCTCCACTAGTTTCTAGGGTTTAGCCTAGC CCCGACCCCGAGGAGGCCCGAGATCGCAATGGAGGGCGGCGGCGAGGGCGCGGAGTCAGC AGCTGTCGCCTCCGCGGCGGCGGCGGAGGTGGAGGTGAAGAACCCGAGGTGCTTCATGGA CGTCAGCATCGGCGGCGAGATTGAGGGGAGGATCGTTATAGAGCTCTACGCGTCGGTGGT GCCGCGGACGGCGGAGAACTTCCGCGCGCTCTGCACCGGGGAGAAGGGCGTCGGCGCCGT CACCGGGAAGCACCTACACTACAAGGGATCTTGCTTCCATCGCGTTATCAAAGGCTTTAT GGTACAAGGTGGAGATATAACTGCTGGTGATGGAACAGGAGGGGAGTCAATTTATGGGTT GAAGTTTGAGGATGAGAATTTTGTTTTGAAGCATGAGAGGAAAGGAATGCTATCAATGGC TAATTCTGGTCCCAACACAAATGGATCTCAGTTTTTCATCACTACAACTCGGACACCTCA TTTAGATGGGAAACATGTAGTTTTTGGTAGAGTAATTAAGGGAATGGGGGTGGTTCGCTC TGTTGAGCATGCTCCTGTTGGAGAGGCTGACCGCCCGACTTCTGATGTTGAAATTGTCGA TTGTGGGGAACTTCCGGAAGGTGCTGATGATGGAGTTGTGAACTTCTTCAATGATGGTGA TACGTATCCTGATTGGCCCAATGATCTTGATGAGAAGCCTATGGAGGTTTCATGGTGGAT GGATGCTGTTGAGTCTGCTAAGGCTTTTGGGAATAATAATTTCAAGAAACAGGATTACAA GGCAGCTCTGAGAAAGTACAGGAAAGCACTGCGTTACTTGGACGTTTGCTGGGAGAAAGA AGATATAGATGAAGAGAAGAGCTCAGCACTGCGGAAGACCAAATCGATTATACTCACAAA TAGCTCTGCATGCAAATTGAAGTTGGGAGATTTGAAGGGTGCTCTGTTGGATGCTGATTT TGCACTGCGTGAAAGTGAGGGCAATGCTAAGGCATTTTTTCGACAAGGACAGGCACACAT TGCACTCAATGACATTGATGCGGCAGTGGAGAGCTTCAAGCATGCATTGGAGTTGGAGCC AAGTGATGGAGGAATTAAACGAGAGCTAGCTGCTGCAAAGAAGAAGATTGCCGACAGAAG GAATCAGGAGCGGAAGGCATTTGCAAGGATGTTCCAACCTTCTGGAAAATCAGACAAAGA CAATGAAGAGAGCAAGTGATCCCTAGTTTCCTTTCCCCGGCAGAACTTTTGGTAGCTTGA TCTGGGATACATACTGGAACCGTGAAGAGGGTATAACAAGGGAGTCTGCGCAGCTAACGC AAAAGACGCTGACTCCCTATCTAGATACAAGGAAAAAAAATAGTGGGGGAGAGGATAGCC TTTGTTTTTCTTTTGCATTACTACAAAAGTAATTGTGCGTATCAACGCTGTTAAAGCCGA GACATTGAACTGAACAGCACGGTTTCCACTTTTCAGACTTTGCTGCAAGGCATGCCAATG GACATTTCCTT