Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0216400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:5921695:5923664:-1 gene:Os06g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os06t0216400-01)
Sequence	ATGCAGCTTCGGGTGCTCCCGAACGCCCGCGCGGCCCTCATCCGCGCGGTGGCGGATGCC CCCGGCCGCCGCGAGGAGCAGGCCCTCCACTGCCTCGCCTGCAAGCTGGGCCTCGCCGGC GATGCGGTGCTGGCCACCGCACTGCTCACCCGCTACGCCAGGCGCGGCCTCCTGGATCCC GCCCGGAGGCTGTTCGACGAAATGCCTCGCAGGGATGCGGTCGCGTTCAACGCCATGCTG GCCGCGCTCGTCGCGTCCCGGAGGATGGCCGACGCACGGGAGCTGTTCGAGCGGATGCCG GACAGGACCCCCGCCTCGTGGAACACCATGGTTACGTGTTACTGCAAGGCCGGCGACCTC GGCTCCGCCAGGGAGGTGTTCGAGGCGAGCCTCGGGGCGACGGCGAGCAATGTCGTGTCG TGGAACACGATGATCGATGGGTACTGCAAGGCCGGGAGAATGGACGCTGCGCAGGAGCTT TTCGATTGTATGGGCTGCTCTTTCTCCTCTTCCCCGTCGCCGGACGTTGTCACATGGAAC ACGATGATGGCCGGGTATTTGCGCCGAGGTGACCCCGCTACCGCCATCGCCATGTTCCGC CGGTTGATGCGACAGACAGTGCAGCAACAGACGCTCATGATGCCCACCACGGTCACCATA GCCACCGTGGTGACCGCGTGCACGCAGGCAGGGGACTTTGCCTTTGGCCGGCGAGTCCAT CACTACATCCGTCAGCTCGGGACAAGGATCGACGCCGTGCTAAGCAACGCCCTCATCGAC ATGTACTTCAAGTGCGGGAGCGTGGACCGCGCGCTCGACGTCTTCGCCACCATGCCCGAC GGCCCCAACCTCTTCTGCTGGAACACGGTGATCGCGGGGCTAGGCATGAACGGCCGCGGC GAGGACGCCGTCAGGGCGTTCCACGACATGGTCGGGAGGAGTCGAACGTGCCGCGGGATC ATCCGGCCCGACGGGGTGACGTTCGTGGCGCTCCTGTCGGCGTGCAGCCACTCCGGCCTG GTAGCGGAGGGCCGGAGGTTCTTCGCCGAGATGGTGCCGGTCCATGGCGTCGAGCCCCGG GAGGAGCACTACGGCTGCATGGTCGACCTCCTCTGCCGCGCCGGACTCCTCGGCGACGCC GTGCGCGTCGTGCGGGCGATGCCCGTCAGGCCGAACGCCAAGATTCTCGGGTGTCTCCTG CTTCACGCCCGCCGCTTGTCGTCGGCGTCGGAGGAGGACGGCGTCAGGGTGGGCGAGTGG GTGGCGGACCGGATATCGGAGCTGGACCTGGACGACGGCGCTGCCTATGGCCTGTCCAAC ATGTACGCCTCGTTGCAGAGGTGGGATCATGTGGAGATGCACCGGATCAAGGTGAACGCG GCGGTGCGCCATAAGCAGCCTGGTCAGAGCAGCTGCATGATCTAG

Peptide Sequence

PEP ID	Os06t0216400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:5921695:5923664:-1 gene:Os06g0216400 transcript:Os06t0216400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os06t0216400-01)
Sequence	MQLRVLPNARAALIRAVADAPGRREEQALHCLACKLGLAGDAVLATALLTRYARRGLLDP ARRLFDEMPRRDAVAFNAMLAALVASRRMADARELFERMPDRTPASWNTMVTCYCKAGDL GSAREVFEASLGATASNVVSWNTMIDGYCKAGRMDAAQELFDCMGCSFSSSPSPDVVTWN TMMAGYLRRGDPATAIAMFRRLMRQTVQQQTLMMPTTVTIATVVTACTQAGDFAFGRRVH HYIRQLGTRIDAVLSNALIDMYFKCGSVDRALDVFATMPDGPNLFCWNTVIAGLGMNGRG EDAVRAFHDMVGRSRTCRGIIRPDGVTFVALLSACSHSGLVAEGRRFFAEMVPVHGVEPR EEHYGCMVDLLCRAGLLGDAVRVVRAMPVRPNAKILGCLLLHARRLSSASEEDGVRVGEW VADRISELDLDDGAAYGLSNMYASLQRWDHVEMHRIKVNAAVRHKQPGQSSCMI

Transcript Sequence

Transcript ID	Os06t0216400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:5921695:5923664:-1 gene:Os06g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os06t0216400-01)
Sequence	GAGGGGATCTCATTCCTCTCCCTACACCCGGGCACCCGGCGGCCGGCGGTGGAGCTCCAC CCCGACGAGCCCACCCCGCGGCATTGTCTGCTGCTAAAGCCGAGCTCTACGGGTGAGCCG GTGAGGCACGGCCACACGAGCACCCACCCCCATGGACGGAGACCACGTTGGGAGGAAGGC CACCACCATCAGCGCTCGGGGCGCCGAGGAGCAGCCGTTCGGAGGAGCAACGAGTTGTTC ACAGGCGCCGCCTATCTGATCTGATGCAGCTTCGGGTGCTCCCGAACGCCCGCGCGGCCC TCATCCGCGCGGTGGCGGATGCCCCCGGCCGCCGCGAGGAGCAGGCCCTCCACTGCCTCG CCTGCAAGCTGGGCCTCGCCGGCGATGCGGTGCTGGCCACCGCACTGCTCACCCGCTACG CCAGGCGCGGCCTCCTGGATCCCGCCCGGAGGCTGTTCGACGAAATGCCTCGCAGGGATG CGGTCGCGTTCAACGCCATGCTGGCCGCGCTCGTCGCGTCCCGGAGGATGGCCGACGCAC GGGAGCTGTTCGAGCGGATGCCGGACAGGACCCCCGCCTCGTGGAACACCATGGTTACGT GTTACTGCAAGGCCGGCGACCTCGGCTCCGCCAGGGAGGTGTTCGAGGCGAGCCTCGGGG CGACGGCGAGCAATGTCGTGTCGTGGAACACGATGATCGATGGGTACTGCAAGGCCGGGA GAATGGACGCTGCGCAGGAGCTTTTCGATTGTATGGGCTGCTCTTTCTCCTCTTCCCCGT CGCCGGACGTTGTCACATGGAACACGATGATGGCCGGGTATTTGCGCCGAGGTGACCCCG CTACCGCCATCGCCATGTTCCGCCGGTTGATGCGACAGACAGTGCAGCAACAGACGCTCA TGATGCCCACCACGGTCACCATAGCCACCGTGGTGACCGCGTGCACGCAGGCAGGGGACT TTGCCTTTGGCCGGCGAGTCCATCACTACATCCGTCAGCTCGGGACAAGGATCGACGCCG TGCTAAGCAACGCCCTCATCGACATGTACTTCAAGTGCGGGAGCGTGGACCGCGCGCTCG ACGTCTTCGCCACCATGCCCGACGGCCCCAACCTCTTCTGCTGGAACACGGTGATCGCGG GGCTAGGCATGAACGGCCGCGGCGAGGACGCCGTCAGGGCGTTCCACGACATGGTCGGGA GGAGTCGAACGTGCCGCGGGATCATCCGGCCCGACGGGGTGACGTTCGTGGCGCTCCTGT CGGCGTGCAGCCACTCCGGCCTGGTAGCGGAGGGCCGGAGGTTCTTCGCCGAGATGGTGC CGGTCCATGGCGTCGAGCCCCGGGAGGAGCACTACGGCTGCATGGTCGACCTCCTCTGCC GCGCCGGACTCCTCGGCGACGCCGTGCGCGTCGTGCGGGCGATGCCCGTCAGGCCGAACG CCAAGATTCTCGGGTGTCTCCTGCTTCACGCCCGCCGCTTGTCGTCGGCGTCGGAGGAGG ACGGCGTCAGGGTGGGCGAGTGGGTGGCGGACCGGATATCGGAGCTGGACCTGGACGACG GCGCTGCCTATGGCCTGTCCAACATGTACGCCTCGTTGCAGAGGTGGGATCATGTGGAGA TGCACCGGATCAAGGTGAACGCGGCGGTGCGCCATAAGCAGCCTGGTCAGAGCAGCTGCA TGATCTAGCAGGCTGCAAGAACTGAAGATTATTGCTAGCCTGGGATTGATGACAATTGTC GTCAATTGCTGTCAATGATGTACCTGGTAGCTATGTACAGGTATTCGATTTTCCTCTAAG GGCCCCTTTGAATTGGAGGATTTGCATAGGAATTTTGGAGGATTTAATTTCCTAAGGATT TTTTCCTATCAAACCCTTTGATTCATAGGAAAGTATATGAAATTTTTCTTAGGATTGCAT TCCTATAGCTCAATTTCATAGGAAAATAAGCAAGAGATTCAACCTCTTGG