Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0213400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:5784199:5788998:-1 gene:Os06g0213400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF829, eukaryotic family protein. (Os06t0213400-01)
Sequence	ATGTGGCCCGGCTGCGGCGGCCGCTTCTACTGGGCGCCCGCGCCGCCGTCGCCGTCGGCG GCGGGCGCGAGGGGCGTCGTGGTGGTGTTCGGGTGGGTGTGGAGCGACGAGGCGCAGCTG CGGCCGTTCGTCGAGCTCTACGCGTCGCTCGGGTGGCGCTGCCTCGTCTGCCACCCCGAC CTCGTCGCGCTGTATCTGTCTGAGAAAGCTGCGTCGCTGGCATCTGGTGTTATCAGTGAA TTAGTGAAGGAATTCAAAGTAAAGCCATTGCCAACTGTGTTTGCTTCCTTTTCTGGTGGT TCAAAGGGATGCATGTACAAGGTTATTCAGTTACTTGATGGAAACTGTGAAGGAGATGCA ACCATGAAGGACTATAGGTTGGTGAGAAACTGTATCTGTGGGCAAATCTATGACTCTGGC CCAGTAGATTTTTTCAGTGATGTGGGTACCCAGTTTCTCCAAAATCCTATGATTGGCAAC TCATCTCGACCATCCATGTTACTTTCATGGATGACAAAGGCCCTTGCATCTGGAATGGAC ACACTATTCCCAAGCAGAATTGAAGCTCAGCGTGCAGAGTACTGGCACACACTATATTCA TCAGCAGGGCTGGGTCCTGTTCTTATGCTTTGCTCTGAAGATGATGATCTTGCTCCATGT CATGTTGTCTGTGGTTTTGCCAGGCGTCTCATTGAACTGGGTACTGATGTTAAAGTTATC AAGTGGAGTGATTCCCCTCATGTTGGCCATTACATGTTGCATGAAGCAGAATACAGGAGT GCTGTAAATGATACTCTGATAAAAGCTCTTGTCACCTTTTGCCACAGAAGCCAGCTGAAT GCCACAAGTGATCAGGAATACAAGATAGCACACTCCGTGTGCAGTCTGCACAACGTGGCT GCTAATTCAAATGAGAGGCTGAGAAGGGTAGCCAACGGCCCCAGTGACCACTTCTTCTTG CCAAGTTCAAAGGACCATAATGAATCTAGGGATCCGGATTCTTTGATTGATGAACAGAGG CGACAACTATCCTATCCACCCAGCATGGAGCCTCAAGGAGTCCTTGGCCAAATTCTGTTT GATGTTTGTGTTCCGAAGAACGTTGAAGGATGGGACATCAAACCAACAGTGTCCCCAAAC GGACGGCCAACATTGGCTTCTGCGCGGCAACTCGGCCCTTTCAATCCCATCAAGTATTTT CGACGCTCAAGGCTATAA

Peptide Sequence

PEP ID	Os06t0213400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:5784199:5788998:-1 gene:Os06g0213400 transcript:Os06t0213400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF829, eukaryotic family protein. (Os06t0213400-01)
Sequence	MWPGCGGRFYWAPAPPSPSAAGARGVVVVFGWVWSDEAQLRPFVELYASLGWRCLVCHPD LVALYLSEKAASLASGVISELVKEFKVKPLPTVFASFSGGSKGCMYKVIQLLDGNCEGDA TMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQNPMIGNSSRPSMLLSWMTKALASGMD TLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSEDDDLAPCHVVCGFARRLIELGTDVKVI KWSDSPHVGHYMLHEAEYRSAVNDTLIKALVTFCHRSQLNATSDQEYKIAHSVCSLHNVA ANSNERLRRVANGPSDHFFLPSSKDHNESRDPDSLIDEQRRQLSYPPSMEPQGVLGQILF DVCVPKNVEGWDIKPTVSPNGRPTLASARQLGPFNPIKYFRRSRL

Transcript Sequence

Transcript ID	Os06t0213400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:5784199:5788998:-1 gene:Os06g0213400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF829, eukaryotic family protein. (Os06t0213400-01)
Sequence	AGCGACGAGCCAAACGCCGAAGCGACTCCTCGTTTCGTCTCCTCCCCATCTCTCCCCCCT TCCGCTTCCGAGCCAAGCAACCGAGCGGAGCAGCACAAACCCTCCTTCTCCGCCTCGATT CCGCGCGCGCGTGGGTCCCCCCACCTCACCGTCACCGGAGGAGCAGCACCGGGGGGTCGC TGGCCATGTGGCCCGGCTGCGGCGGCCGCTTCTACTGGGCGCCCGCGCCGCCGTCGCCGT CGGCGGCGGGCGCGAGGGGCGTCGTGGTGGTGTTCGGGTGGGTGTGGAGCGACGAGGCGC AGCTGCGGCCGTTCGTCGAGCTCTACGCGTCGCTCGGGTGGCGCTGCCTCGTCTGCCACC CCGACCTCGTCGCGCTGTATCTGTCTGAGAAAGCTGCGTCGCTGGCATCTGGTGTTATCA GTGAATTAGTGAAGGAATTCAAAGTAAAGCCATTGCCAACTGTGTTTGCTTCCTTTTCTG GTGGTTCAAAGGGATGCATGTACAAGGTTATTCAGTTACTTGATGGAAACTGTGAAGGAG ATGCAACCATGAAGGACTATAGGTTGGTGAGAAACTGTATCTGTGGGCAAATCTATGACT CTGGCCCAGTAGATTTTTTCAGTGATGTGGGTACCCAGTTTCTCCAAAATCCTATGATTG GCAACTCATCTCGACCATCCATGTTACTTTCATGGATGACAAAGGCCCTTGCATCTGGAA TGGACACACTATTCCCAAGCAGAATTGAAGCTCAGCGTGCAGAGTACTGGCACACACTAT ATTCATCAGCAGGGCTGGGTCCTGTTCTTATGCTTTGCTCTGAAGATGATGATCTTGCTC CATGTCATGTTGTCTGTGGTTTTGCCAGGCGTCTCATTGAACTGGGTACTGATGTTAAAG TTATCAAGTGGAGTGATTCCCCTCATGTTGGCCATTACATGTTGCATGAAGCAGAATACA GGAGTGCTGTAAATGATACTCTGATAAAAGCTCTTGTCACCTTTTGCCACAGAAGCCAGC TGAATGCCACAAGTGATCAGGAATACAAGATAGCACACTCCGTGTGCAGTCTGCACAACG TGGCTGCTAATTCAAATGAGAGGCTGAGAAGGGTAGCCAACGGCCCCAGTGACCACTTCT TCTTGCCAAGTTCAAAGGACCATAATGAATCTAGGGATCCGGATTCTTTGATTGATGAAC AGAGGCGACAACTATCCTATCCACCCAGCATGGAGCCTCAAGGAGTCCTTGGCCAAATTC TGTTTGATGTTTGTGTTCCGAAGAACGTTGAAGGATGGGACATCAAACCAACAGTGTCCC CAAACGGACGGCCAACATTGGCTTCTGCGCGGCAACTCGGCCCTTTCAATCCCATCAAGT ATTTTCGACGCTCAAGGCTATAATTTGTCTGCTGCAACTGTGAGTTTTGTGTACATAACG GAGGCAAGATGTCTAATATGACTCTGAGCAAGCTTTCTCCTATGTAAGTTTCCTTGAGAT TGACTCACCTGCAATTTCTTTTTTGCACCGATGACTGTACATATGTTGTGTATAGTTATA CTAGTGGATATATTAGAAGGGGCCTTCTAGGTTGGGATGGTAAGGTGTATACTAACAGTG TATAGGGGAAGGTGTGCACTATTATGGCCCTAAATTATCTATTTTTGTGCCCCATAGTCA TATGATCTAATCTAATTATGAGAACTATTTATCTTC