Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0211300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:5688697:5690594:1 gene:Os06g0211300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os06t0211300-01)
Sequence

ATGGACGGCAGCAGCCTCAAGTCGGCGCAGCTCCTCGAGCAGATGCGCCTCCACATGGCC
ACCGACGCCGGCAAGGACATCGCCAAGAAGGTCGGCCTCGTCTACCAGTTCAACATCGCC
CCCAAGAAAATCGGAGTCGACGAGGAGATCTTCGTCGTCGACCTCAAGAAGGGCGAGGTC
ACCAAAGGGCCGTACGAGGGGAAGCCAGATGCGACCTTCTCCTTCACGGATTCTGATTTC
CTCTCGATCGCCACGGGGAAGATGAACCCACAGATCGCGTTCATTCGAGGCGCGATAAAG
ATCAAGGGGAGCATAAGCGCGGCGCAGAAGTTCACCCCGGATATCTTCCCCAAGCCTTCC
AAACTGTAG

Peptide Sequence

PEP ID

Os06t0211300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:5688697:5690594:1 gene:Os06g0211300 transcript:Os06t0211300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os06t0211300-01)
Sequence

MDGSSLKSAQLLEQMRLHMATDAGKDIAKKVGLVYQFNIAPKKIGVDEEIFVVDLKKGEV
TKGPYEGKPDATFSFTDSDFLSIATGKMNPQIAFIRGAIKIKGSISAAQKFTPDIFPKPS
KL

Transcript Sequence

Transcript ID

Os06t0211300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:5688697:5690594:1 gene:Os06g0211300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os06t0211300-01)
Sequence

ACAACGAGGAGAGGAACAGCAGAGCAAAGCCCCACCTCCTCCCCTCCTGCGCATCTCCTC
TCCTCCCCGGAATCTGCTCTCCGCCGCCGCCGCCCGGCAGAGGAGATGGACGGCAGCAGC
CTCAAGTCGGCGCAGCTCCTCGAGCAGATGCGCCTCCACATGGCCACCGACGCCGGCAAG
GACATCGCCAAGAAGGTCGGCCTCGTCTACCAGTTCAACATCGCCCCCAAGAAAATCGGA
GTCGACGAGGAGATCTTCGTCGTCGACCTCAAGAAGGGCGAGGTCACCAAAGGGCCGTAC
GAGGGGAAGCCAGATGCGACCTTCTCCTTCACGGATTCTGATTTCCTCTCGATCGCCACG
GGGAAGATGAACCCACAGATCGCGTTCATTCGAGGCGCGATAAAGATCAAGGGGAGCATA
AGCGCGGCGCAGAAGTTCACCCCGGATATCTTCCCCAAGCCTTCCAAACTGTAGAAGGTT
AGAGGTATATTGTTTGGGCGAGGTTGGTAATAATAAGGGTTGCTAGTTGCAATACTGTGT
TTGATAGAATGGGGGGAGAAAACTGGAAACAGGAACAACACACGAGTGCCTGATGTTATG
GCTGGAAATCGGATATCGCTATGGTTAATGTTATCACTGATATCAAGTTCAATCCTTGTT
TGTTGTGACTTTCTTTTATATATCATAATATGATCCAAATGTCTGTTGATGTTTCTTGAC
GAATATACCCACTATAGTGATGATATCAGATTTCTATAATGAAACTAGCAATTGCTTGGC
AGTGCCGTTTTACCCTGCACTGCATTGTGCTGTGAAGATCTACTAGAATGACTTACATTG
TGAAACGGAGGAAGTAGTTTTAAAGGGCCTAGCAATGTATTGTATAATATAGTTCGTTCT
GTTTTACAGGGTTATACTGGTTCTTGAGTTTGATGGGGTTATGCTGGGTTAGAGCAGGAT
TTGTAGCCATATTAGTGTGCAGCTGTTTCATTTTCCTGTTACCACAATAACAGTTTAACC
ATCCGCATATTCAGTACATAGTGTACTACCCTGATAAGTCCATGCCTCCATGGTTGATAG
GGCTAGCATTGACAGTTGTGATAGAGAGATCCATGACCATGATGTTAGCAACTGCCAATT
GTGTAATCAGCTATCACTCATTTTCTCATAATTGCTAATAATGAAGAAGGCCCACAAAT